Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13294 Striga asiatica HOM05D005947 ORTHO05D007498 2.7e-74 282.0 147 100.0
THA.LOC104814930 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 1.4e-14 83.6 58 77.6
QL09p012952 Quercus lobata HOM05D005947 ORTHO05D007498 3.1e-14 82.4 117 50.4
Ciclev10005457m.g Citrus clementina HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
COL.COLO4_10059 Corchorus olitorius HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
Duzib084G0036 Durio zibethinus HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
Duzib205G0732 Durio zibethinus HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
Medtr6g048300 Medicago truncatula HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
SGA_v2.0_scaffold8G04565 Striga asiatica HOM05D005947 ORTHO05D399322 4.1e-14 82.0 62 71.0
Thecc.03G183900 Theobroma cacao HOM05D005947 ORTHO05D007498 4.1e-14 82.0 58 75.9
CANSAT21G1923 Cannabis sativa HOM05D005947 ORTHO05D007498 5.4e-14 81.6 101 54.5
CiPaw.05G262900 Carya illinoinensis HOM05D005947 ORTHO05D007498 5.4e-14 81.6 58 74.1
PGSC0003DMG400010127 Solanum tuberosum HOM05D005947 ORTHO05D007498 5.4e-14 81.6 58 77.6
ClCG01G000930 Citrullus lanatus HOM05D005947 ORTHO05D007498 7.0e-14 81.3 58 74.1
Sed0018068 Sechium edule HOM05D005947 ORTHO05D007498 7.0e-14 81.3 58 74.1
Dinv28389 Davidia involucrata HOM05D005947 ORTHO05D007498 9.2e-14 80.9 58 74.1
Migut.F00295 Erythranthe guttata HOM05D005947 ORTHO05D007498 9.2e-14 80.9 58 75.9
Eucgr.A02743 Eucalyptus grandis HOM05D005947 ORTHO05D007498 9.2e-14 80.9 81 61.7
SalBow4G2978 Salvia bowleyana HOM05D005947 ORTHO05D007498 9.2e-14 80.9 58 75.9
Aqoxy7G00241 Aquilegia oxysepala HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 74.1
DCAR_010659 Daucus carota HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 75.9
FAN01G2305 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.2e-13 80.5 108 50.0
FAN03G2880 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.2e-13 80.5 108 50.0
FAN10G0541 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.2e-13 80.5 108 50.0
FAN10G2124 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.2e-13 80.5 108 50.0
Lsat_1_v5_gn_9_56500 Lactuca sativa HOM05D005947 ORTHO05D007498 1.2e-13 80.5 83 63.9
Lj1P1004T65 Lonicera japonica HOM05D005947 ORTHO05D007498 1.2e-13 80.5 104 54.8
Manes.14G022800 Manihot esculenta HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 72.4
Nn6g33304 Nelumbo nucifera HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 74.1
Peaxi162Scf00444g00012 Petunia axillaris HOM05D005947 ORTHO05D007498 1.2e-13 80.5 115 52.2
PGR042G2417 Punica granatum HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 72.4
TWI14G0750 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 1.2e-13 80.5 58 75.9
THA.LOC104798913 Tarenaya hassleriana HOM05D005947 ORTHO05D007498 1.6e-13 80.1 58 74.1
unitig_37.g11971 Utricularia gibba HOM05D005947 ORTHO05D007498 1.6e-13 80.1 58 74.1
Aa31LG11G3310 Aethionema arabicum HOM05D005947 ORTHO05D007498 2.0e-13 79.7 58 72.4
Aa31sc89G80 Aethionema arabicum HOM05D000041 ORTHO05D000061 2.0e-13 79.7 58 72.4
Cc04_g12430 Coffea canephora HOM05D005947 ORTHO05D007498 2.0e-13 79.7 113 48.7
FAN03G2555 Fragaria x ananassa HOM05D005947 ORTHO05D007498 2.0e-13 79.7 108 50.0
Gohir.D08G109600 Gossypium hirsutum HOM05D005947 ORTHO05D007498 2.0e-13 79.7 102 53.9
Gorai.004G117300 Gossypium raimondii HOM05D005947 ORTHO05D007498 2.0e-13 79.7 102 53.9
Phvul.004G106800 Phaseolus vulgaris HOM05D005947 ORTHO05D007498 2.0e-13 79.7 102 53.9
Prupe.2G300600 Prunus persica HOM05D005947 ORTHO05D007498 2.0e-13 79.7 104 55.8
RcHm_v2.0_Chr1g0378251 Rosa chinensis HOM05D005947 ORTHO05D007498 2.0e-13 79.7 117 50.4
Sabra04G0053200 Salix brachista HOM05D005947 ORTHO05D007498 2.0e-13 79.7 58 72.4
Nn1g01628 Nelumbo nucifera HOM05D005947 ORTHO05D007498 2.7e-13 79.3 58 70.7
Rhsim09G0200500 Rhododendron simsii HOM05D005947 ORTHO05D007498 2.7e-13 79.3 121 49.6
ATR0661G312 Amborella trichopoda HOM05D005947 ORTHO05D007498 3.5e-13 79.0 104 53.8
CARHR189560 Cardamine hirsuta HOM05D005947 ORTHO05D007498 3.5e-13 79.0 58 72.4
CDE11G0334 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 3.5e-13 79.0 72 65.3
Thhalv10005713m.g Eutrema salsugineum HOM05D005947 ORTHO05D007498 3.5e-13 79.0 58 72.4
Sp2g23290 Schrenkiella parvula HOM05D005947 ORTHO05D007498 3.5e-13 79.0 58 72.4
Sc19g0001250 Simmondsia chinensis HOM05D005947 ORTHO05D007498 3.5e-13 79.0 58 70.7
Cc02_g02400 Coffea canephora HOM05D005947 ORTHO05D007498 4.5e-13 78.6 101 52.5
Gohir.A08G098000 Gossypium hirsutum HOM05D005947 ORTHO05D007498 4.5e-13 78.6 100 51.0
Psat0ss1860g0200 Pisum sativum HOM05D005947 ORTHO05D007498 4.5e-13 78.6 104 53.8
Haze_00040 Corylus avellana HOM05D005947 ORTHO05D007498 5.9e-13 78.2 101 53.5
Nitab4.5_0008851g0010 Nicotiana tabacum HOM05D005947 ORTHO05D007498 5.9e-13 78.2 115 49.6
Solyc03g007980.1 Solanum lycopersicum HOM05D005947 ORTHO05D007498 5.9e-13 78.2 123 52.8
Sopen03g003920 Solanum pennellii HOM05D005947 ORTHO05D007498 5.9e-13 78.2 123 52.8
Ca_20085_v3 Cicer arietinum L. HOM05D005947 ORTHO05D007498 7.8e-13 77.8 112 51.8
CsaV3_5G001080 Cucumis sativus L. HOM05D005947 ORTHO05D007498 7.8e-13 77.8 106 52.8
ECA232G3749 Erigeron canadensis HOM05D005947 ORTHO05D007498 7.8e-13 77.8 102 52.0
TPR.G33515 Trifolium pratense HOM05D005947 ORTHO05D007498 7.8e-13 77.8 94 57.4
Cfa016284 Carpinus fangiana HOM05D005947 ORTHO05D007498 1.0e-12 77.4 101 53.5
MELO3C005838.2 Cucumis melo HOM05D005947 ORTHO05D007498 1.0e-12 77.4 119 48.7
Lalb_Chr01g0009481 Lupinus albus HOM05D005947 ORTHO05D007498 1.0e-12 77.4 118 50.0
TWI39G0764 Tripterygium wilfordii HOM05D005947 ORTHO05D007498 1.0e-12 77.4 110 54.5
MSTRG.27089 Avicennia marina HOM05D005947 ORTHO05D007498 1.3e-12 77.0 101 53.5
Dinv35250 Davidia involucrata HOM05D005947 ORTHO05D007498 1.3e-12 77.0 113 49.6
Glyma.09G132300 Glycine max HOM05D005947 ORTHO05D007498 1.3e-12 77.0 102 54.9
arahy.Tifrunner.gnm1.ann1.4MV0VI Arachis hypogaea HOM05D005947 ORTHO05D007498 1.7e-12 76.6 58 70.7
arahy.Tifrunner.gnm1.ann1.D9DNDH Arachis hypogaea HOM05D005947 ORTHO05D007498 1.7e-12 76.6 58 70.7
CDE02G4387 Ceratophyllum demersum HOM05D005947 ORTHO05D007498 1.7e-12 76.6 58 72.4
FAN06G0215 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.7e-12 76.6 109 49.5
FAN06G1268 Fragaria x ananassa HOM05D005947 ORTHO05D007498 1.7e-12 76.6 109 49.5
SGA_v2.0_scaffold60G21105 Striga asiatica HOM05D005947 ORTHO05D007498 1.7e-12 76.6 107 51.4
VMungo0464G0961 Vigna mungo HOM05D005947 ORTHO05D007498 1.7e-12 76.6 102 52.9
Atru.chr1.362 Acer truncatum HOM05D005947 ORTHO05D007498 2.3e-12 76.3 104 51.0
Actinidia31839 Actinidia chinensis HOM05D005947 ORTHO05D007498 2.3e-12 76.3 115 48.7
FvH4_7g30210 Fragaria vesca HOM05D005947 ORTHO05D007498 2.3e-12 76.3 109 49.5
vmacro09816 Vaccinium macrocarpon HOM05D005947 ORTHO05D007498 2.3e-12 76.3 106 51.9
MSTRG.8712 Avicennia marina HOM05D005947 ORTHO05D007498 2.9e-12 75.9 105 53.3
A06p34800 Brassica napus HOM05D005947 ORTHO05D007498 2.9e-12 75.9 118 46.6
PSO782G1988 Papaver somniferum HOM05D005947 ORTHO05D007498 2.9e-12 75.9 101 52.5
Sed0027671 Sechium edule HOM05D005947 ORTHO05D007498 2.9e-12 75.9 106 52.8
AagrBONN_evm.TU.Sc2ySwM_368.3402 Anthoceros agrestis HOM05D005947 ORTHO05D007498 3.8e-12 75.5 58 69.0
Cpa.g.sc107.105 Carica papaya HOM05D005947 ORTHO05D007498 3.8e-12 75.5 119 50.4
MD07G1278700 Malus domestica HOM05D005947 ORTHO05D007498 3.8e-12 75.5 112 52.7
Lalb_Chr03g0034831 Lupinus albus HOM05D005947 ORTHO05D007498 5.0e-12 75.1 111 50.5
BcaB04g19841 Brassica carinata HOM05D005947 ORTHO05D007498 6.6e-12 74.7 101 50.5
CSS0033085 Camellia sinensis var. sinensis HOM05D005947 ORTHO05D007498 6.6e-12 74.7 102 53.9
BcaNung01201 Brassica carinata HOM05D005947 ORTHO05D007498 8.6e-12 74.3 107 49.5
Carub.0006s2174 Capsella rubella HOM05D005947 ORTHO05D007498 8.6e-12 74.3 103 50.5
Lj2g0014936 Lotus japonicus HOM05D005947 ORTHO05D007498 8.6e-12 74.3 96 50.0
Nitab4.5_0000084g0430 Nicotiana tabacum HOM05D005947 ORTHO05D007498 8.6e-12 74.3 115 47.8
PSO478G4027 Papaver somniferum HOM05D005947 ORTHO05D007498 8.6e-12 74.3 103 50.5
SEGI_04763 Sequoiadendron giganteum HOM05D005947 ORTHO05D007498 8.6e-12 74.3 58 69.0
AT5G24020 Arabidopsis thaliana HOM05D005947 ORTHO05D007498 1.1e-11 73.9 102 52.0
CAN.G236.6 Capsicum annuum HOM05D005947 ORTHO05D007498 1.1e-11 73.9 118 49.2
Hma1.2p1_0274F.1_g110170 Hydrangea macrophylla HOM05D005947 ORTHO05D007498 1.1e-11 73.9 125 45.6
MBI11_g04748_MAGBIO Magnolia biondii HOM05D005947 ORTHO05D007498 1.1e-11 73.9 100 51.0
BcaNung01829 Brassica carinata HOM05D005947 ORTHO05D007498 1.5e-11 73.6 119 45.4
AUR62031418 Chenopodium quinoa HOM05D005947 ORTHO05D007498 1.5e-11 73.6 108 50.0
Glyma.16G179200 Glycine max HOM05D005947 ORTHO05D007498 1.5e-11 73.6 116 49.1
Pp3c1_24820 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.5e-11 73.6 58 67.2
Pp3c2_15820 Physcomitrium patens HOM05D005947 ORTHO05D007498 1.5e-11 73.6 58 67.2
Potri.004G080100 Populus trichocarpa HOM05D005947 ORTHO05D007498 1.5e-11 73.6 101 49.5
TAR375G0765 Trochodendron aralioides HOM05D005947 ORTHO05D007498 1.5e-11 73.6 123 45.5
BraA06t26407Z Brassica rapa HOM05D005947 ORTHO05D007498 2.5e-11 72.8 119 46.2
C07p43700 Brassica napus HOM05D005947 ORTHO05D007498 3.3e-11 72.4 119 46.2
BolC7t44900H Brassica oleracea HOM05D005947 ORTHO05D007498 3.3e-11 72.4 119 46.2
AL6G35340 Arabidopsis lyrata HOM05D005947 ORTHO05D007498 4.3e-11 72.0 102 51.0
AUR62021126 Chenopodium quinoa HOM05D005947 ORTHO05D007498 4.3e-11 72.0 113 48.7
SGA_v2.0_scaffold89G27467 Striga asiatica HOM05D005947 ORTHO05D007498 4.3e-11 72.0 54 70.4
SMO364G0223 Selaginella moellendorffii HOM05D005947 ORTHO05D007498 7.3e-11 71.2 58 63.8
TAR374G0782 Trochodendron aralioides HOM05D005947 ORTHO05D007498 9.5e-11 70.9 123 43.9
Ah.07g206580 Amaranthus hybridus HOM05D005947 ORTHO05D007498 2.1e-10 69.7 110 46.4
SGA_v2.0_scaffold3G01646 Striga asiatica HOM05D005947 ORTHO05D007498 3.6e-10 68.9 101 47.5
Cre12.g522950 Chlamydomonas reinhardtii HOM05D005947 ORTHO05D007498 2.3e-09 66.2 58 55.2
SGA_v2.0_scaffold185G40041 Striga asiatica HOM05D005947 ORTHO05D401275 2.3e-09 66.2 51 76.5
Zm00001eb268640 Zea mays HOM05D005947 ORTHO05D007498 2.3e-09 66.2 96 44.8
Os06g0106000 Oryza sativa ssp. japonica HOM05D005947 ORTHO05D007498 4.4e-08 62.0 92 43.5


User provided reference genes

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