Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 3.7e-92 341.7 187 100.0
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 6.4e-36 154.8 228 44.3
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 3.5e-34 149.1 236 41.5
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 1.9e-27 126.7 226 38.9
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 1.1e-24 117.5 240 36.2
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 2.2e-20 103.2 212 34.4
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 3.7e-20 102.4 115 51.3
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 4.9e-20 102.1 202 36.6
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.4e-19 100.5 220 35.0
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 2.4e-19 99.8 220 34.5
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 1.6e-18 97.1 235 34.9
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 2.7e-18 96.3 233 33.5
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 4.6e-18 95.5 237 33.8
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 4.6e-18 95.5 212 35.8
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 6.0e-18 95.1 212 34.0
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.0e-17 94.4 216 34.3
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.3e-17 94.0 223 35.0
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 1.3e-17 94.0 233 34.3
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 2.3e-17 93.2 135 44.4
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 5.1e-17 92.0 236 33.9
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 5.1e-17 92.0 113 50.4
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 8.6e-17 91.3 242 34.3
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 1.5e-16 90.5 217 32.7
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 1.9e-16 90.1 113 50.4
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 2.5e-16 89.7 235 32.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 4.3e-16 89.0 224 33.9
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 1.6e-15 87.0 109 47.7
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 2.8e-15 86.3 233 31.8
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.8e-15 86.3 246 30.9
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 2.8e-15 86.3 104 46.2
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.7e-15 85.5 235 32.3
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 8.1e-15 84.7 227 34.8
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.4e-14 84.0 233 31.3
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.3e-14 83.2 217 33.2
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 3.1e-14 82.8 243 30.5
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 4.0e-14 82.4 219 30.6
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 5.2e-14 82.0 222 33.3
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 6.8e-14 81.6 213 31.5
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 6.8e-14 81.6 221 30.8
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 3.4e-13 79.3 103 43.7
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 3.4e-13 79.3 125 43.2
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 4.4e-13 79.0 225 30.7
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 5.8e-13 78.6 238 29.8
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.3e-12 77.4 231 32.9
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 2.2e-12 76.6 252 31.0
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.9e-12 75.5 103 42.7
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 4.9e-12 75.5 238 31.5
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 6.4e-12 75.1 239 28.5
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 8.4e-12 74.7 238 30.3
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.1e-11 74.3 101 42.6
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.1e-11 74.3 141 39.7
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 1.4e-11 73.9 222 33.8
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 1.9e-11 73.6 202 33.7
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 2.4e-11 73.2 147 36.1
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 3.2e-11 72.8 106 44.3
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 3.2e-11 72.8 204 34.8
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 4.1e-11 72.4 238 29.4
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 5.4e-11 72.0 145 40.0
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 7.1e-11 71.6 219 29.7
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 9.2e-11 71.2 245 28.6
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 1.2e-10 70.9 238 29.4
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 3.5e-10 69.3 232 30.6
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 3.5e-10 69.3 118 39.8
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 1.3e-09 67.4 148 36.5
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.3e-09 67.4 243 26.7
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 1.3e-09 67.4 264 28.0
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 2.3e-09 66.6 242 28.9
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 5.1e-09 65.5 230 27.4
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.6e-09 64.7 227 26.4
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.9e-08 63.5 122 38.5
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.3e-08 61.6 191 30.4
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 1.2e-07 60.8 261 28.0
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 8.1e-07 58.2 188 30.3
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 1.4e-06 57.4 254 28.3
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 5.2e-06 55.5 249 28.1
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 8.9e-06 54.7 66 42.4


User provided reference genes

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