Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13220 Striga asiatica HOM05D039287 ORTHO05D004724 4.5e-74 282.0 246 100.0
Lsat_1_v5_gn_4_67220 Lactuca sativa HOM05D039287 ORTHO05D004724 2.0e-21 107.1 255 65.1
ATR0559G103 Amborella trichopoda HOM05D039287 ORTHO05D004724 1.7e-12 77.4 178 80.9
CAN.G95.2 Capsicum annuum HOM05D004463 ORTHO05D004724 3.8e-12 76.3 136 75.0
Actinidia27858 Actinidia chinensis HOM05D000578 ORTHO05D000422 5.5e-11 72.4 137 77.4
TWI75G1243 Tripterygium wilfordii HOM05D004463 ORTHO05D004724 9.3e-11 71.6 197 66.5
Actinidia00571 Actinidia chinensis HOM05D004463 ORTHO05D004724 1.2e-10 71.2 133 81.2
Sopen10g024240 Solanum pennellii HOM05D004463 ORTHO05D004724 1.6e-10 70.9 139 79.1
Hund00218 Selenicereus undatus HOM05D004463 ORTHO05D004724 2.7e-10 70.1 132 69.7
DCAR_022913 Daucus carota HOM05D004463 ORTHO05D004724 3.5e-10 69.7 142 81.0
Solyc10g054330.3 Solanum lycopersicum HOM05D004463 ORTHO05D004724 6.0e-10 68.9 141 76.6
PGSC0003DMG400026665 Solanum tuberosum HOM05D004463 ORTHO05D004724 6.0e-10 68.9 141 76.6
Oeu036635.1 Olea europaea HOM05D004463 ORTHO05D004724 8.7e-09 65.1 133 83.5
Oeu055628.1 Olea europaea HOM05D004463 ORTHO05D004724 8.7e-09 65.1 133 82.7
HanXRQChr05g0143421 Helianthus annuus HOM05D004463 ORTHO05D004724 2.5e-08 63.5 131 81.7
Nitab4.5_0001154g0030 Nicotiana tabacum HOM05D061411 ORTHO05D004724 9.6e-08 61.6 81 59.3
Dinv42004 Davidia involucrata HOM05D004463 ORTHO05D004724 2.1e-07 60.5 133 78.9
Cc02_g16980 Coffea canephora HOM05D004463 ORTHO05D004724 2.8e-07 60.1 139 77.7
Nn5g29212 Nelumbo nucifera HOM05D004463 ORTHO05D004724 3.7e-07 59.7 230 50.0
ECA232G1454 Erigeron canadensis HOM05D004463 ORTHO05D004724 6.2e-07 58.9 138 78.3
Oeu046135.1 Olea europaea HOM05D004463 ORTHO05D004724 8.1e-07 58.5 130 85.4
Duzib132G0628 Durio zibethinus HOM05D004463 ORTHO05D004724 1.8e-06 57.4 139 77.0
Potri.004G161800 Populus trichocarpa HOM05D004463 ORTHO05D004724 3.1e-06 56.6 132 67.4
Dinv23459 Davidia involucrata HOM05D004463 ORTHO05D004724 4.0e-06 56.2 133 78.9


User provided reference genes

Program Settings