Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13199 Striga asiatica HOM05D056388 ORTHO05D405581 2.0e-109 399.1 194 100.0
SGA_v2.0_scaffold99G29506 Striga asiatica HOM05D000069 ORTHO05D405936 5.1e-20 102.1 58 82.8
SGA_v2.0_scaffold68G22827 Striga asiatica HOM05D000069 ORTHO05D001405 1.6e-18 97.1 105 57.1
SGA_v2.0_scaffold181G39774 Striga asiatica HOM05D000753 ORTHO05D005714 6.2e-18 95.1 64 76.6
Migut.F01949 Erythranthe guttata HOM05D000069 ORTHO05D001405 8.4e-15 84.7 63 66.7
Cc02_g10820 Coffea canephora HOM05D000069 ORTHO05D001405 1.7e-12 77.0 70 52.9
Actinidia38874 Actinidia chinensis HOM05D000069 ORTHO05D001405 8.7e-12 74.7 62 56.5
CAN.G321.51 Capsicum annuum HOM05D000069 ORTHO05D001405 8.7e-12 74.7 64 54.7
PGSC0003DMG400031066 Solanum tuberosum HOM05D000069 ORTHO05D001405 8.7e-12 74.7 63 55.6
Oeu010014.1 Olea europaea HOM05D000069 ORTHO05D001405 1.1e-11 74.3 69 55.1
Rhsim09G0147100 Rhododendron simsii HOM05D000069 ORTHO05D001405 1.9e-11 73.6 64 57.8
ClCG05G021240 Citrullus lanatus HOM05D000069 ORTHO05D001405 3.3e-11 72.8 65 56.9
Lalb_Chr21g0315191 Lupinus albus HOM05D000069 ORTHO05D001405 4.3e-11 72.4 106 40.6
Solyc11g008260.2 Solanum lycopersicum HOM05D000069 ORTHO05D001405 4.3e-11 72.4 63 55.6
CANSAT56G3389 Cannabis sativa HOM05D000069 ORTHO05D001405 5.6e-11 72.0 73 46.6
DCAR_019063 Daucus carota HOM05D000069 ORTHO05D001405 7.3e-11 71.6 71 50.7
Eucgr.J01054 Eucalyptus grandis HOM05D000069 ORTHO05D001405 7.3e-11 71.6 66 56.1
PGR044G0244 Punica granatum HOM05D000069 ORTHO05D001405 9.6e-11 71.2 70 50.0
RcHm_v2.0_Chr1g0362341 Rosa chinensis HOM05D000069 ORTHO05D001405 9.6e-11 71.2 64 51.6
Aqoxy1G01131 Aquilegia oxysepala HOM05D000069 ORTHO05D001405 1.3e-10 70.9 74 47.3
Sed0002419 Sechium edule HOM05D000069 ORTHO05D001405 2.1e-10 70.1 81 46.9
MELO3C012403.2 Cucumis melo HOM05D000069 ORTHO05D001405 2.8e-10 69.7 66 53.0
Sopen11g004070 Solanum pennellii HOM05D000069 ORTHO05D001405 2.8e-10 69.7 63 54.0
Ca_10535_v3 Cicer arietinum L. HOM05D000069 ORTHO05D001405 3.6e-10 69.3 70 50.0
COL.COLO4_36541 Corchorus olitorius HOM05D000069 ORTHO05D001405 3.6e-10 69.3 68 52.9
CsaV3_5G036030 Cucumis sativus L. HOM05D000069 ORTHO05D001405 3.6e-10 69.3 66 53.0
Psat6g180640 Pisum sativum HOM05D000069 ORTHO05D001405 4.8e-10 68.9 69 46.4
CiPaw.01G267800 Carya illinoinensis HOM05D000069 ORTHO05D001405 6.2e-10 68.6 62 54.8
Lj5g0020661 Lotus japonicus HOM05D000069 ORTHO05D001405 8.1e-10 68.2 61 54.1
TPR.G10296 Trifolium pratense HOM05D000069 ORTHO05D001405 8.1e-10 68.2 64 53.1
Lsat_1_v5_gn_8_18720 Lactuca sativa HOM05D000069 ORTHO05D001405 1.1e-09 67.8 63 54.0
Nitab4.5_0001450g0200 Nicotiana tabacum HOM05D000069 ORTHO05D001405 1.4e-09 67.4 65 50.8
Medtr1g094135 Medicago truncatula HOM05D000069 ORTHO05D001405 1.8e-09 67.0 64 51.6
SalBow4G1595 Salvia bowleyana HOM05D000069 ORTHO05D001405 1.8e-09 67.0 61 52.5
TAR633G1788 Trochodendron aralioides HOM05D000069 ORTHO05D001405 1.8e-09 67.0 62 46.8
Hma1.2p1_0145F.1_g065280 Hydrangea macrophylla HOM05D000069 ORTHO05D001405 2.4e-09 66.6 64 50.0
SalBow4G2585 Salvia bowleyana HOM05D000069 ORTHO05D001405 2.4e-09 66.6 61 52.5
Thecc.10G086000 Theobroma cacao HOM05D000069 ORTHO05D001405 2.4e-09 66.6 66 51.5
ECA233G1755 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.1e-09 66.2 63 54.0
Nitab4.5_0008227g0020 Nicotiana tabacum HOM05D000069 ORTHO05D001405 4.0e-09 65.9 70 48.6
Peaxi162Scf00145g00109 Petunia axillaris HOM05D000069 ORTHO05D001405 4.0e-09 65.9 64 51.6
RcHm_v2.0_Chr3g0466551 Rosa chinensis HOM05D000069 ORTHO05D001405 4.0e-09 65.9 72 47.2
Dinv36386 Davidia involucrata HOM05D000069 ORTHO05D001405 5.3e-09 65.5 61 50.8
Glyma.10G207100 Glycine max HOM05D000069 ORTHO05D001405 5.3e-09 65.5 62 50.0
Ciclev10031865m.g Citrus clementina HOM05D000069 ORTHO05D001405 6.9e-09 65.1 72 45.8
FAN06G4518 Fragaria x ananassa HOM05D000069 ORTHO05D001405 9.0e-09 64.7 72 41.7
MD07G1169100 Malus domestica HOM05D000069 ORTHO05D001405 9.0e-09 64.7 69 47.8
FAN03G0998 Fragaria x ananassa HOM05D000069 ORTHO05D001405 1.2e-08 64.3 72 43.1
FAN06G2379 Fragaria x ananassa HOM05D000069 ORTHO05D001405 1.2e-08 64.3 72 43.1
PSO339G6403 Papaver somniferum HOM05D000069 ORTHO05D001405 1.5e-08 63.9 70 41.4
THA.LOC104809980 Tarenaya hassleriana HOM05D000069 ORTHO05D001405 1.5e-08 63.9 73 46.6
vmacro04831 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.5e-08 63.9 54 53.7
vmacro10248 Vaccinium macrocarpon HOM05D000069 ORTHO05D001405 1.5e-08 63.9 54 53.7
Gohir.D10G210100 Gossypium hirsutum HOM05D000069 ORTHO05D001405 2.0e-08 63.5 65 52.3
Gorai.011G235500 Gossypium raimondii HOM05D000069 ORTHO05D001405 2.0e-08 63.5 65 52.3
CARHR164920 Cardamine hirsuta HOM05D000069 ORTHO05D001405 2.6e-08 63.2 70 48.6
Haze_16747 Corylus avellana HOM05D000069 ORTHO05D001405 2.6e-08 63.2 74 43.2
Nn2g13829 Nelumbo nucifera HOM05D000069 ORTHO05D001405 2.6e-08 63.2 60 45.0
PSO063G2424 Papaver somniferum HOM05D000069 ORTHO05D001405 2.6e-08 63.2 70 42.9
Cfa001803 Carpinus fangiana HOM05D000069 ORTHO05D001405 3.4e-08 62.8 74 43.2
FvH4_7g18550 Fragaria vesca HOM05D000069 ORTHO05D001405 3.4e-08 62.8 72 41.7
Prupe.2G207100 Prunus persica HOM05D000069 ORTHO05D001405 3.4e-08 62.8 72 43.1
QL08p053902 Quercus lobata HOM05D000069 ORTHO05D001405 3.4e-08 62.8 69 43.5
AT3G54940 Arabidopsis thaliana HOM05D000069 ORTHO05D001405 7.6e-08 61.6 70 45.7
VMungo0720G2150 Vigna mungo HOM05D000069 ORTHO05D001405 7.6e-08 61.6 61 47.5
SGA_v2.0_scaffold58G20485 Striga asiatica HOM05D056388 ORTHO05D406556 9.9e-08 61.2 40 75.0
HPP92_005029 Vanilla planifolia HOM05D000069 ORTHO05D001405 9.9e-08 61.2 68 41.2
Ah.09g229810 Amaranthus hybridus HOM05D000069 ORTHO05D001405 1.7e-07 60.5 71 40.8
A09p47930 Brassica napus HOM05D000069 ORTHO05D001405 1.7e-07 60.5 72 41.7
Hund26354 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.7e-07 60.5 65 44.6
AL5G36050 Arabidopsis lyrata HOM05D000069 ORTHO05D001405 2.2e-07 60.1 71 47.9
Phvul.007G099600 Phaseolus vulgaris HOM05D000069 ORTHO05D001405 2.2e-07 60.1 61 45.9
BraA09t40248Z Brassica rapa HOM05D000069 ORTHO05D001405 2.9e-07 59.7 72 41.7
BolC8t50623H Brassica oleracea HOM05D000069 ORTHO05D001405 3.8e-07 59.3 72 41.7
Cpa.g.sc53.142 Carica papaya HOM05D000069 ORTHO05D001405 3.8e-07 59.3 61 50.8
Gohir.A10G201800 Gossypium hirsutum HOM05D000069 ORTHO05D001405 3.8e-07 59.3 68 47.1
Lj3A938T43 Lonicera japonica HOM05D000069 ORTHO05D001405 3.8e-07 59.3 60 43.3
Eucgr.I01305 Eucalyptus grandis HOM05D000069 ORTHO05D001405 4.9e-07 58.9 65 38.5
Sabra10G0177100 Salix brachista HOM05D000069 ORTHO05D001405 4.9e-07 58.9 60 45.0
TWI38G0041 Tripterygium wilfordii HOM05D000069 ORTHO05D001405 4.9e-07 58.9 71 42.3
C08p30170 Brassica napus HOM05D000069 ORTHO05D001405 6.4e-07 58.5 72 41.7
Carub.0007s0096 Capsella rubella HOM05D000069 ORTHO05D001405 6.4e-07 58.5 60 43.3
Aa31sc43G30 Aethionema arabicum HOM05D000069 ORTHO05D001405 8.4e-07 58.2 69 40.6
Thhalv10010475m.g Eutrema salsugineum HOM05D000069 ORTHO05D001405 8.4e-07 58.2 73 43.8
Potri.010G228400 Populus trichocarpa HOM05D000069 ORTHO05D001405 8.4e-07 58.2 60 41.7
AT2G21430 Arabidopsis thaliana HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
BcaC02g08791 Brassica carinata HOM05D004650 ORTHO05D005715 1.1e-06 57.8 56 46.4
BcaNung01281 Brassica carinata HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
A01p00210 Brassica napus HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
C04p50620 Brassica napus HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
BolC1t00038H Brassica oleracea HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
BolC4t26658H Brassica oleracea HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
BraA04t17254Z Brassica rapa HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
Sp7g36740 Schrenkiella parvula HOM05D000069 ORTHO05D001405 1.1e-06 57.8 56 46.4
EL10Ac8g18277 Beta vulgaris HOM05D000069 ORTHO05D001405 1.4e-06 57.4 74 41.9
AUR62040312 Chenopodium quinoa HOM05D000069 ORTHO05D001405 1.4e-06 57.4 68 39.7
AUR62033210 Chenopodium quinoa HOM05D000069 ORTHO05D001405 1.9e-06 57.0 68 39.7
SMO367G0704 Selaginella moellendorffii HOM05D000069 ORTHO05D001405 1.9e-06 57.0 60 45.0
BolC3t20016H Brassica oleracea HOM05D000069 ORTHO05D001405 2.4e-06 56.6 56 44.6
BraA01t00028Z Brassica rapa HOM05D000069 ORTHO05D001405 2.4e-06 56.6 56 44.6
CARHR112340 Cardamine hirsuta HOM05D000069 ORTHO05D001405 2.4e-06 56.6 56 44.6
Manes.10G050900 Manihot esculenta HOM05D000069 ORTHO05D001405 2.4e-06 56.6 61 47.5
AUR62014447 Chenopodium quinoa HOM05D000069 ORTHO05D001405 3.2e-06 56.2 59 49.2
A08p23840 Brassica napus HOM05D000069 ORTHO05D001405 4.2e-06 55.8 56 42.9
BraA08t34336Z Brassica rapa HOM05D000069 ORTHO05D001405 4.2e-06 55.8 56 42.9
BcaB03g12241 Brassica carinata HOM05D000069 ORTHO05D001405 5.4e-06 55.5 56 42.9
Carub.0005s2155 Capsella rubella HOM05D000069 ORTHO05D001405 5.4e-06 55.5 71 42.3
Thhalv10025494m.g Eutrema salsugineum HOM05D000069 ORTHO05D001405 5.4e-06 55.5 56 42.9
Mapoly0122s0009 Marchantia polymorpha HOM05D000069 ORTHO05D001405 5.4e-06 55.5 57 47.4
A04p16140 Brassica napus HOM05D000069 ORTHO05D001405 7.1e-06 55.1 56 44.6
Rhsim05G0070100 Rhododendron simsii HOM05D000069 ORTHO05D001405 7.1e-06 55.1 60 40.0
Atru.chr12.870 Acer truncatum HOM05D000069 ORTHO05D001405 9.3e-06 54.7 45 51.1
Haze_02314 Corylus avellana HOM05D000069 ORTHO05D001405 9.3e-06 54.7 65 36.9
Sp5g07480 Schrenkiella parvula HOM05D000069 ORTHO05D001405 9.3e-06 54.7 71 42.3


User provided reference genes

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