Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13180 Striga asiatica HOM05D001749 ORTHO05D001632 3.8e-105 385.2 249 100.0
SGA_v2.0_scaffold58G20512 Striga asiatica HOM05D001749 ORTHO05D001632 6.0e-50 201.8 248 52.8
MSTRG.5404 Avicennia marina HOM05D001749 ORTHO05D001632 2.5e-35 153.3 249 43.4
Migut.B00219 Erythranthe guttata HOM05D001749 ORTHO05D001632 3.6e-34 149.4 252 40.5
Migut.N01252 Erythranthe guttata HOM05D001749 ORTHO05D001632 1.4e-33 147.5 250 44.4
MSTRG.27689 Avicennia marina HOM05D001749 ORTHO05D001632 3.7e-31 139.4 252 42.5
Dinv23498 Davidia involucrata HOM05D001749 ORTHO05D001632 5.5e-27 125.6 248 39.9
Hma1.2p1_0066F.1_g036220 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.2e-26 124.4 255 41.2
Nitab4.5_0000199g0040 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.8e-25 120.6 263 36.1
SalBow6G3784 Salvia bowleyana HOM05D001749 ORTHO05D001632 3.9e-25 119.4 255 37.6
Cc02_g17320 Coffea canephora HOM05D001749 ORTHO05D001632 2.6e-24 116.7 258 37.2
Oeu029154.2 Olea europaea HOM05D001749 ORTHO05D001632 7.4e-24 115.2 251 35.5
Oeu041631.1 Olea europaea HOM05D001749 ORTHO05D001632 2.2e-23 113.6 250 36.4
Nitab4.5_0014783g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.2e-21 107.8 269 34.2
Oeu061220.1 Olea europaea HOM05D001749 ORTHO05D001632 2.0e-21 107.1 250 35.6
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 4.5e-21 105.9 248 32.7
Actinidia00539 Actinidia chinensis HOM05D001749 ORTHO05D001632 5.9e-21 105.5 251 37.1
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 1.7e-20 104.0 259 33.6
MELO3C023313.2 Cucumis melo HOM05D001749 ORTHO05D001632 3.8e-20 102.8 251 32.7
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 5.0e-20 102.4 253 34.4
CsaV3_2G014930 Cucumis sativus L. HOM05D001749 ORTHO05D001632 6.5e-20 102.1 257 32.7
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 6.5e-20 102.1 260 34.2
DCAR_022986 Daucus carota HOM05D001749 ORTHO05D001632 8.5e-20 101.7 248 34.3
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 4.2e-19 99.4 258 33.3
Glyma.11G115300 Glycine max HOM05D001749 ORTHO05D001632 4.2e-19 99.4 254 31.5
CAN.G1058.9 Capsicum annuum HOM05D001749 ORTHO05D001632 5.5e-19 99.0 257 31.5
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 5.5e-19 99.0 253 34.0
Sed0016213 Sechium edule HOM05D001749 ORTHO05D001632 5.5e-19 99.0 277 30.3
Ciclev10029211m.g Citrus clementina HOM05D001749 ORTHO05D001632 7.2e-19 98.6 258 31.0
FAN27G1258 Fragaria x ananassa HOM05D001749 ORTHO05D001632 9.4e-19 98.2 258 32.6
Peaxi162Scf00016g00515 Petunia axillaris HOM05D001749 ORTHO05D001632 9.4e-19 98.2 253 43.1
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 1.2e-18 97.8 258 32.9
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 1.2e-18 97.8 258 33.3
PGSC0003DMG400000718 Solanum tuberosum HOM05D001749 ORTHO05D001632 2.7e-18 96.7 252 32.1
COL.COLO4_25968 Corchorus olitorius HOM05D001749 ORTHO05D001632 4.7e-18 95.9 252 31.0
DCAR_021933 Daucus carota HOM05D001749 ORTHO05D001632 4.7e-18 95.9 248 34.3
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 6.1e-18 95.5 251 31.5
Rhsim05G0072700 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.0e-18 95.1 267 33.0
Nitab4.5_0000308g0310 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.0e-17 94.7 258 31.8
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.4e-17 94.4 258 32.6
PGSC0003DMG400000717 Solanum tuberosum HOM05D001749 ORTHO05D001632 1.4e-17 94.4 261 31.4
Solyc01g109800.2 Solanum lycopersicum HOM05D001749 ORTHO05D001632 2.3e-17 93.6 109 47.7
Peaxi162Scf00684g00210 Petunia axillaris HOM05D001749 ORTHO05D001632 3.0e-17 93.2 251 33.5
Lsat_1_v5_gn_9_108241 Lactuca sativa HOM05D001749 ORTHO05D001632 3.9e-17 92.8 251 30.7
Dinv42048 Davidia involucrata HOM05D001749 ORTHO05D001632 6.7e-17 92.0 255 43.9
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 8.8e-17 91.7 261 32.2
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.1e-16 91.3 251 31.5
Nitab4.5_0018301g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.5e-16 90.9 252 31.3
Duzib132G0910 Durio zibethinus HOM05D001749 ORTHO05D001632 2.0e-16 90.5 267 31.1
Gohir.A03G196000 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.0e-16 90.5 252 30.6
Thecc.02G082100 Theobroma cacao HOM05D001749 ORTHO05D001632 2.6e-16 90.1 258 31.4
TWI79G0604 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 2.6e-16 90.1 254 31.5
Sopen01g051990 Solanum pennellii HOM05D001749 ORTHO05D001632 3.3e-16 89.7 252 31.3
Manes.04G074762 Manihot esculenta HOM05D001749 ORTHO05D001632 4.4e-16 89.4 258 31.0
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 5.7e-16 89.0 253 32.0
Eucgr.I01283 Eucalyptus grandis HOM05D001749 ORTHO05D001632 7.4e-16 88.6 250 29.6
Duzib052G0040 Durio zibethinus HOM05D001749 ORTHO05D001632 9.7e-16 88.2 253 36.8
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 1.3e-15 87.8 258 30.6
Glyma.12G041200 Glycine max HOM05D001749 ORTHO05D001632 1.3e-15 87.8 252 30.6
DCAR_003661 Daucus carota HOM05D001749 ORTHO05D001632 1.7e-15 87.4 251 33.1
SalBow3G2565 Salvia bowleyana HOM05D001749 ORTHO05D001632 2.2e-15 87.0 240 37.5
Duzib248G0723 Durio zibethinus HOM05D001749 ORTHO05D001632 2.8e-15 86.7 249 28.9
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 2.8e-15 86.7 272 31.2
Potri.009G119000 Populus trichocarpa HOM05D001749 ORTHO05D001632 4.8e-15 85.9 258 31.8
TWI79G0729 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 4.8e-15 85.9 255 30.6
Gohir.A13G033300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 6.3e-15 85.5 246 27.6
THA.LOC104807305 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 6.3e-15 85.5 254 30.7
vmacro17476 Vaccinium macrocarpon HOM05D001749 ORTHO05D001632 6.3e-15 85.5 120 45.0
PGSC0003DMG400000715 Solanum tuberosum HOM05D001749 ORTHO05D001632 8.2e-15 85.1 248 29.8
VMungo0251G1135 Vigna mungo HOM05D001749 ORTHO05D001632 8.2e-15 85.1 251 29.5
arahy.Tifrunner.gnm1.ann1.HXWY1L Arachis hypogaea HOM05D001749 ORTHO05D001632 1.1e-14 84.7 306 27.1
Gohir.D02G217101 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.1e-14 84.7 259 27.8
Solyc01g109810.2 Solanum lycopersicum HOM05D001749 ORTHO05D001632 1.1e-14 84.7 253 32.0
CiPaw.06G133900 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.4e-14 84.3 256 29.3
Gohir.D13G031200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.8e-14 84.0 248 28.6
TWI31G0051 Tripterygium wilfordii HOM05D001749 ORTHO05D001632 1.8e-14 84.0 256 30.9
Cfa005037 Carpinus fangiana HOM05D001749 ORTHO05D001632 2.4e-14 83.6 248 30.2
Gorai.005G245100 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.4e-14 83.6 259 28.2
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 2.4e-14 83.6 258 31.8
MBI16_g08780_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 3.1e-14 83.2 254 30.7
Phvul.011G043200 Phaseolus vulgaris HOM05D001749 ORTHO05D001632 3.1e-14 83.2 251 30.3
Rhsim11G0179200 Rhododendron simsii HOM05D001749 ORTHO05D001632 3.1e-14 83.2 251 33.1
arahy.Tifrunner.gnm1.ann1.39NQDQ Arachis hypogaea HOM05D001749 ORTHO05D001632 4.1e-14 82.8 301 27.6
Haze_02350 Corylus avellana HOM05D001749 ORTHO05D001632 5.3e-14 82.4 248 30.2
PGR142G0388 Punica granatum HOM05D001749 ORTHO05D001632 5.3e-14 82.4 229 30.6
CANSAT11G0884 Cannabis sativa HOM05D001749 ORTHO05D001632 1.2e-13 81.3 124 40.3
ECA236G4502 Erigeron canadensis HOM05D001749 ORTHO05D001632 1.6e-13 80.9 243 35.0
Gorai.013G035600 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.6e-13 80.1 248 27.8
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 3.5e-13 79.7 266 28.9
CiPaw.05G066900 Carya illinoinensis HOM05D001749 ORTHO05D001632 7.7e-13 78.6 252 31.3
CiPaw.06G133800 Carya illinoinensis HOM05D001749 ORTHO05D001632 7.7e-13 78.6 251 29.5
HanXRQChr16g0505471 Helianthus annuus HOM05D001749 ORTHO05D001632 7.7e-13 78.6 111 47.7
arahy.Tifrunner.gnm1.ann1.BPXV57 Arachis hypogaea HOM05D001749 ORTHO05D001632 1.0e-12 78.2 92 43.5
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.7e-12 77.4 251 29.1
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 2.2e-12 77.0 259 29.3
Haze_02351 Corylus avellana HOM05D001749 ORTHO05D001632 2.2e-12 77.0 248 27.4
Haze_02352 Corylus avellana HOM05D001749 ORTHO05D001632 2.2e-12 77.0 248 27.4
Sabra09G0091300 Salix brachista HOM05D001749 ORTHO05D001632 2.2e-12 77.0 258 29.8
Lsat_1_v5_gn_7_90501 Lactuca sativa HOM05D001749 ORTHO05D001632 3.8e-12 76.3 219 31.5
Ca_15357_v3 Cicer arietinum L. HOM05D001749 ORTHO05D001632 5.0e-12 75.9 250 27.2
Cpa.g.sc106.17 Carica papaya HOM05D001749 ORTHO05D001632 8.5e-12 75.1 113 39.8
TPR.G30499 Trifolium pratense HOM05D001749 ORTHO05D001632 8.5e-12 75.1 233 27.0
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 8.5e-12 75.1 239 27.2
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-11 74.3 260 28.5
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 1.5e-11 74.3 260 28.5
Lj1g0015330 Lotus japonicus HOM05D001749 ORTHO05D001632 1.9e-11 73.9 268 28.4
MBI10_g06727_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 2.5e-11 73.6 252 31.0
Cpa.g.sc1139.1 Carica papaya HOM05D001749 ORTHO05D001632 3.2e-11 73.2 260 28.8
Cfa005035 Carpinus fangiana HOM05D001749 ORTHO05D001632 3.2e-11 73.2 251 27.9
Medtr4g070660 Medicago truncatula HOM05D001749 ORTHO05D001632 3.2e-11 73.2 245 29.0
Aqoxy5G01581 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 5.5e-11 72.4 261 32.2
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 7.2e-11 72.0 254 29.1
GSVIVG01018920001 Vitis vinifera HOM05D001749 ORTHO05D001632 7.2e-11 72.0 248 31.0
Sopen01g052020 Solanum pennellii HOM05D001749 ORTHO05D001632 9.4e-11 71.6 251 29.9
HanXRQChr09g0261391 Helianthus annuus HOM05D001749 ORTHO05D001632 2.1e-10 70.5 260 28.5
Sabra04G0105300 Salix brachista HOM05D001749 ORTHO05D001632 2.7e-10 70.1 267 28.5
Lj3g0014272 Lotus japonicus HOM05D001749 ORTHO05D001632 4.7e-10 69.3 122 33.6
PGSC0003DMG400000716 Solanum tuberosum HOM05D001749 ORTHO05D001632 8.0e-10 68.6 106 43.4
Medtr4g070640 Medicago truncatula HOM05D001749 ORTHO05D001632 1.4e-09 67.8 247 27.5
THA.LOC104819615 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 1.4e-09 67.8 251 28.3
ATR0568G223 Amborella trichopoda HOM05D001749 ORTHO05D001632 1.8e-09 67.4 252 27.8
Potri.005G120300 Populus trichocarpa HOM05D001749 ORTHO05D001632 1.8e-09 67.4 97 38.1
EL10Ac9g21701 Beta vulgaris HOM05D001749 ORTHO05D001632 3.0e-09 66.6 255 27.1
Medtr3g117050 Medicago truncatula HOM05D001749 ORTHO05D001632 3.0e-09 66.6 257 26.8
CARHR242840 Cardamine hirsuta HOM05D001749 ORTHO05D001632 4.0e-09 66.2 255 29.4
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 5.2e-09 65.9 255 27.1
Aa31LG4G19030 Aethionema arabicum HOM05D001749 ORTHO05D001632 6.7e-09 65.5 120 30.0
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.5e-08 64.3 255 27.8
Thhalv10027578m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 1.5e-08 64.3 263 29.7
A09p44040 Brassica napus HOM05D001749 ORTHO05D001632 2.6e-08 63.5 258 26.7
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 2.6e-08 63.5 259 28.6
HanXRQChr11g0325491 Helianthus annuus HOM05D001749 ORTHO05D001632 2.6e-08 63.5 95 36.8
PSO541G5621 Papaver somniferum HOM05D001749 ORTHO05D001632 2.6e-08 63.5 109 36.7
BcaB01g00565 Brassica carinata HOM05D001749 ORTHO05D001632 3.3e-08 63.2 108 37.0
BraA09t39862Z Brassica rapa HOM05D001749 ORTHO05D001632 3.3e-08 63.2 256 26.6
TPR.G32205 Trifolium pratense HOM05D001749 ORTHO05D001632 3.3e-08 63.2 274 25.5
Actinidia27886 Actinidia chinensis HOM05D001749 ORTHO05D001632 4.4e-08 62.8 207 32.9
AT4G34560 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 5.7e-08 62.4 262 27.5
PGR031G2349 Punica granatum HOM05D001749 ORTHO05D001632 5.7e-08 62.4 78 43.6
Sc02g0005800 Simmondsia chinensis HOM05D001749 ORTHO05D001632 5.7e-08 62.4 255 29.0
arahy.Tifrunner.gnm1.ann1.RJ9RH5 Arachis hypogaea HOM05D001749 ORTHO05D001632 9.7e-08 61.6 243 25.5
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 9.7e-08 61.6 258 28.3
Duzib147G1275 Durio zibethinus HOM05D001749 ORTHO05D001632 9.7e-08 61.6 266 25.6
ECA232G4251 Erigeron canadensis HOM05D001749 ORTHO05D001632 9.7e-08 61.6 109 33.0
AUR62004089 Chenopodium quinoa HOM05D001749 ORTHO05D001632 1.3e-07 61.2 258 27.1
PSO675G0347 Papaver somniferum HOM05D001749 ORTHO05D001632 1.3e-07 61.2 109 35.8
Aa31LG1G14960 Aethionema arabicum HOM05D001749 ORTHO05D001632 1.7e-07 60.8 88 39.8
Sc15g0007080 Simmondsia chinensis HOM05D001749 ORTHO05D001632 1.7e-07 60.8 257 29.2
Sopen01g052010 Solanum pennellii HOM05D001749 ORTHO05D001632 1.7e-07 60.8 251 27.5
Carub.0008s2808 Capsella rubella HOM05D001749 ORTHO05D001632 2.8e-07 60.1 255 25.9
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 2.8e-07 60.1 258 27.1
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 3.7e-07 59.7 244 24.2
BcaB05g23254 Brassica carinata HOM05D001749 ORTHO05D001632 3.7e-07 59.7 119 36.1
BcaB05g23255 Brassica carinata HOM05D001749 ORTHO05D001632 3.7e-07 59.7 119 36.1
Carub.0007s0573 Capsella rubella HOM05D001749 ORTHO05D001632 3.7e-07 59.7 92 42.4
Sabra05G0099000 Salix brachista HOM05D001749 ORTHO05D001632 3.7e-07 59.7 86 38.4
C07p60620 Brassica napus HOM05D001749 ORTHO05D001632 4.8e-07 59.3 259 28.2
BolC7t46492H Brassica oleracea HOM05D001749 ORTHO05D001632 4.8e-07 59.3 259 28.2
EL10As8g23912 Beta vulgaris HOM05D001749 ORTHO05D001632 6.3e-07 58.9 241 34.0
Thhalv10010637m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 6.3e-07 58.9 126 34.1
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 8.2e-07 58.5 252 27.8
Potri.007G021500 Populus trichocarpa HOM05D001749 ORTHO05D001632 8.2e-07 58.5 97 34.0
AT5G66440 Arabidopsis thaliana HOM05D001749 ORTHO05D001632 1.1e-06 58.2 275 26.2
BolC8t50232H Brassica oleracea HOM05D001749 ORTHO05D001632 1.1e-06 58.2 260 25.4
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 1.1e-06 58.2 254 27.6
Lj4C36T10 Lonicera japonica HOM05D001749 ORTHO05D001632 1.1e-06 58.2 107 32.7
A03p48050 Brassica napus HOM05D001749 ORTHO05D001632 1.4e-06 57.8 257 29.6
BraA03t13912Z Brassica rapa HOM05D001749 ORTHO05D001632 1.4e-06 57.8 257 29.6
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 1.4e-06 57.8 96 33.3
Thhalv10004766m.g Eutrema salsugineum HOM05D001749 ORTHO05D001632 1.4e-06 57.8 272 25.4
BraA01t02289Z Brassica rapa HOM05D001749 ORTHO05D001632 1.8e-06 57.4 120 37.5
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 1.8e-06 57.4 115 32.2
THA.LOC104826664 Tarenaya hassleriana HOM05D001749 ORTHO05D001632 2.4e-06 57.0 260 26.5
BcaNung05716 Brassica carinata HOM05D001749 ORTHO05D001632 3.1e-06 56.6 259 25.5
C08p26160 Brassica napus HOM05D001749 ORTHO05D001632 3.1e-06 56.6 258 24.8
Duzib187G2007 Durio zibethinus HOM05D001749 ORTHO05D001632 3.1e-06 56.6 267 25.1
A01p23800 Brassica napus HOM05D001749 ORTHO05D001632 4.1e-06 56.2 120 37.5
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 7.0e-06 55.5 251 25.1
Sabra07G0018500 Salix brachista HOM05D001749 ORTHO05D001632 7.0e-06 55.5 110 30.9
THA.LOC104824815 Tarenaya hassleriana HOM05D008867 ORTHO05D001632 7.0e-06 55.5 104 29.8
AL7G16650 Arabidopsis lyrata HOM05D001749 ORTHO05D001632 9.1e-06 55.1 249 28.1
A09p10000 Brassica napus HOM05D001749 ORTHO05D001632 9.1e-06 55.1 88 38.6
CANSAT01G2116 Cannabis sativa HOM05D001749 ORTHO05D001632 9.1e-06 55.1 94 35.1
AUR62007601 Chenopodium quinoa HOM05D001749 ORTHO05D001632 9.1e-06 55.1 264 26.1
THA.LOC104807743 Tarenaya hassleriana HOM05D008867 ORTHO05D011103 9.1e-06 55.1 129 30.2


User provided reference genes

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