Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13171 Striga asiatica HOM05D006980 ORTHO05D008704 8.1e-158 560.8 395 100.0
SGA_v2.0_scaffold13G06715 Striga asiatica HOM05D006980 ORTHO05D008704 9.9e-47 191.8 496 43.3
SalBow3G1904 Salvia bowleyana HOM05D006980 ORTHO05D008704 8.4e-22 109.0 224 39.3
MSTRG.19261 Avicennia marina HOM05D006980 ORTHO05D008704 1.6e-20 104.8 221 34.8
Migut.J01034 Erythranthe guttata HOM05D006980 ORTHO05D008704 1.0e-19 102.1 220 38.2
Eucgr.G00976 Eucalyptus grandis HOM05D006980 ORTHO05D008704 1.5e-15 88.2 418 26.6
CAN.G137.42 Capsicum annuum HOM05D006980 ORTHO05D008704 3.0e-11 73.9 262 45.8
Eucgr.G00972 Eucalyptus grandis HOM05D006980 ORTHO05D008704 4.3e-10 70.1 426 23.9
Oeu056884.1 Olea europaea HOM05D006980 ORTHO05D008704 4.3e-10 70.1 186 31.2
Cc02_g28460 Coffea canephora HOM05D006980 ORTHO05D008704 1.1e-08 65.5 201 31.3
Lj1g0023344 Lotus japonicus HOM05D006980 ORTHO05D008704 2.4e-08 64.3 47 63.8
TWI77G0642 Tripterygium wilfordii HOM05D006980 ORTHO05D008704 5.3e-08 63.2 39 74.4
Zm00001eb303860 Zea mays HOM05D003514 ORTHO05D004280 9.1e-08 62.4 88 40.9
TPR.G19555 Trifolium pratense HOM05D006980 ORTHO05D008704 1.5e-07 61.6 48 60.4
Sabra06G0051200 Salix brachista HOM05D006980 ORTHO05D008704 2.6e-07 60.8 43 55.8
Manes.09G055100 Manihot esculenta HOM05D006980 ORTHO05D008704 4.5e-07 60.1 42 61.9
Medtr7g104640 Medicago truncatula HOM05D006980 ORTHO05D008704 5.9e-07 59.7 43 62.8
Carub.0004s1800 Capsella rubella HOM05D006980 ORTHO05D008704 7.7e-07 59.3 45 64.4
Cc00_g27900 Coffea canephora HOM05D006980 ORTHO05D008704 7.7e-07 59.3 185 30.8
Psat3g033240 Pisum sativum HOM05D006980 ORTHO05D008704 7.7e-07 59.3 43 62.8
QL07p038724 Quercus lobata HOM05D006980 ORTHO05D008704 1.0e-06 58.9 45 60.0
QL07p038975 Quercus lobata HOM05D006980 ORTHO05D008704 1.0e-06 58.9 45 60.0
Ca_09007_v3 Cicer arietinum L. HOM05D006980 ORTHO05D008704 1.3e-06 58.5 43 62.8
Os01g0908800 Oryza sativa ssp. japonica HOM05D006980 ORTHO05D008704 3.8e-06 57.0 282 23.0
A05p09600 Brassica napus HOM05D006980 ORTHO05D008704 5.0e-06 56.6 242 28.9
CARHR130480 Cardamine hirsuta HOM05D006980 ORTHO05D008704 5.0e-06 56.6 43 60.5
Zm00001eb434620 Zea mays HOM05D006980 ORTHO05D008704 6.5e-06 56.2 225 23.6


User provided reference genes

Program Settings