Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.4e-119 432.2 216 100.0
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 3.0e-61 239.2 197 62.4
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 2.5e-60 236.1 218 58.3
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 9.5e-60 234.2 208 58.7
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 1.5e-57 226.9 220 55.9
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 2.6e-57 226.1 196 59.7
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 1.9e-55 219.9 216 56.5
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 2.4e-55 219.5 220 55.0
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 3.2e-55 219.2 196 57.7
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 4.1e-55 218.8 197 56.3
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 7.1e-55 218.0 218 56.0
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 9.2e-55 217.6 191 58.6
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 1.2e-54 217.2 196 59.2
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 4.6e-54 215.3 191 55.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 4.6e-54 215.3 187 57.2
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 1.0e-53 214.2 183 57.4
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.0e-53 214.2 186 58.6
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 1.3e-53 213.8 189 56.6
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 1.7e-53 213.4 198 56.1
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 1.7e-53 213.4 187 56.7
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 1.7e-53 213.4 211 53.1
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.3e-53 213.0 191 54.5
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 2.3e-53 213.0 195 55.9
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 3.3e-52 209.1 190 57.4
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 4.3e-52 208.8 198 54.0
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 5.6e-52 208.4 210 51.9
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 5.6e-52 208.4 186 59.7
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 7.3e-52 208.0 210 53.3
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 7.3e-52 208.0 185 56.8
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 9.5e-52 207.6 198 57.1
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.6e-51 206.8 186 54.3
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 2.1e-51 206.5 222 50.9
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 2.1e-51 206.5 198 53.5
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 2.1e-51 206.5 184 56.0
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 2.1e-51 206.5 187 54.5
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 2.1e-51 206.5 198 54.0
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 2.8e-51 206.1 187 57.8
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 4.7e-51 205.3 189 55.6
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 8.1e-51 204.5 209 52.6
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 8.1e-51 204.5 188 53.7
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 1.8e-50 203.4 202 54.0
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.8e-50 203.4 187 56.7
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 2.3e-50 203.0 197 53.8
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 2.3e-50 203.0 239 51.5
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 2.3e-50 203.0 210 54.8
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 3.1e-50 202.6 216 49.5
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 5.2e-50 201.8 187 56.7
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 5.2e-50 201.8 195 50.8
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 5.2e-50 201.8 203 51.7
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 6.8e-50 201.4 197 54.8
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 1.2e-49 200.7 232 49.1
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 2.0e-49 199.9 192 51.6
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 2.6e-49 199.5 196 52.6
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 4.4e-49 198.7 198 52.5
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 5.8e-49 198.4 191 55.5
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 9.9e-49 197.6 189 55.0
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.7e-48 196.8 222 51.8
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 2.9e-48 196.1 179 55.3
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 2.9e-48 196.1 212 50.9
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 3.8e-48 195.7 212 49.1
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 3.8e-48 195.7 184 56.5
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 3.8e-48 195.7 184 56.5
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 6.4e-48 194.9 187 54.5
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.1e-47 194.1 194 53.6
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 1.4e-47 193.7 216 50.9
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 1.9e-47 193.4 220 52.7
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 1.9e-47 193.4 219 50.7
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.4e-47 193.0 174 53.4
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 4.1e-47 192.2 201 49.8
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 4.1e-47 192.2 200 52.0
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.6e-46 190.3 187 49.2
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 2.7e-46 189.5 196 52.6
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 7.8e-46 188.0 189 54.0
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 1.7e-45 186.8 212 47.2
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 2.3e-45 186.4 186 51.1
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.0e-45 186.0 186 50.5
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.9e-45 185.7 196 48.0
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 3.9e-45 185.7 190 52.6
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.9e-45 185.7 167 56.3
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 8.6e-45 184.5 179 52.0
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 8.6e-45 184.5 220 50.0
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 1.9e-44 183.3 179 52.5
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 3.3e-44 182.6 216 48.1
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 3.3e-44 182.6 187 47.6
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 9.6e-44 181.0 186 51.1
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 9.6e-44 181.0 186 51.1
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 9.6e-44 181.0 186 51.1
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 9.6e-44 181.0 214 47.2
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 2.8e-43 179.5 185 53.0
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 2.8e-43 179.5 188 51.6
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 6.2e-43 178.3 211 47.4
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 3.1e-42 176.0 174 52.3
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 4.0e-42 175.6 177 53.1
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 6.9e-42 174.9 173 53.2
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 1.2e-41 174.1 196 48.0
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 1.5e-41 173.7 186 49.5
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 2.6e-41 172.9 174 52.3
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 3.4e-41 172.6 186 49.5
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 9.9e-41 171.0 174 52.3
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 4.9e-40 168.7 199 48.7
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 4.9e-40 168.7 196 49.5
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 4.9e-40 168.7 196 45.9
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 8.4e-40 167.9 219 43.8
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 1.1e-39 167.5 203 46.3
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.9e-39 166.8 171 52.0
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.5e-36 157.1 195 45.1
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 9.6e-36 154.5 232 42.2
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 1.7e-32 143.7 173 45.7
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 5.4e-31 138.7 181 45.9
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 7.6e-25 118.2 130 54.6
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 1.3e-19 100.9 199 36.7
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 3.7e-19 99.4 187 34.2
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 6.9e-18 95.1 189 32.8
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 9.0e-18 94.7 83 59.0
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 5.8e-17 92.0 197 28.4
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 8.4e-16 88.2 138 39.1
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 3.2e-15 86.3 109 47.7
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 7.9e-14 81.6 104 44.2
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 5.3e-10 68.9 105 38.1
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 6.5e-08 62.0 187 26.7
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 7.2e-07 58.5 116 37.1


User provided reference genes

Program Settings