Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.4e-212 741.9 370 100.0
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 1.7e-117 426.8 385 58.7
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 3.3e-113 412.5 369 57.5
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 1.5e-108 397.1 374 56.4
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 1.2e-107 394.0 323 58.8
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 1.4e-106 390.6 303 61.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 4.4e-105 385.6 302 60.3
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 5.7e-105 385.2 315 60.3
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 5.7e-105 385.2 364 54.7
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 9.1e-103 377.9 373 51.5
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 7.7e-102 374.8 297 62.3
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 2.9e-101 372.9 365 52.1
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 5.0e-101 372.1 351 53.8
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 2.5e-100 369.8 306 59.8
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 4.2e-100 369.0 308 58.1
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 5.5e-100 368.6 294 60.5
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.0e-98 362.5 329 56.2
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.0e-98 362.5 329 56.2
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 6.8e-98 361.7 291 60.1
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 1.5e-97 360.5 315 57.1
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 5.7e-97 358.6 306 57.8
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 5.7e-97 358.6 309 58.3
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 7.5e-97 358.2 381 50.7
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 9.8e-97 357.8 301 58.5
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 9.8e-97 357.8 308 58.1
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.7e-96 357.1 313 56.9
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 4.9e-96 355.5 308 57.8
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 6.3e-96 355.1 338 52.4
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 8.3e-96 354.8 294 58.2
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 8.3e-96 354.8 296 59.8
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.4e-95 354.0 297 58.2
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 1.8e-95 353.6 294 58.5
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 2.4e-95 353.2 296 57.4
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 3.1e-95 352.8 338 52.4
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 4.1e-95 352.4 290 59.3
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 4.1e-95 352.4 297 57.6
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.4e-95 352.1 306 57.2
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 7.0e-95 351.7 338 52.4
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.2e-94 350.9 295 59.3
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 1.2e-94 350.9 292 57.2
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.6e-94 350.5 340 52.4
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 2.7e-94 349.7 290 57.9
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 2.7e-94 349.7 290 57.9
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 2.7e-94 349.7 290 57.9
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 1.7e-93 347.1 296 57.4
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 2.9e-93 346.3 312 56.1
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 3.8e-93 345.9 312 56.1
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 3.8e-93 345.9 321 53.3
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 5.0e-93 345.5 318 54.1
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 6.6e-93 345.1 292 56.5
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 1.9e-92 343.6 297 57.6
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 3.3e-92 342.8 315 55.2
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 7.2e-92 341.7 312 54.2
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 9.5e-92 341.3 302 57.3
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 9.5e-92 341.3 313 54.3
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 1.2e-91 340.9 337 53.4
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.8e-91 339.7 291 58.4
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 2.8e-91 339.7 292 56.8
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.0e-90 337.8 319 56.1
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 1.8e-90 337.0 313 53.4
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.8e-90 337.0 300 54.7
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 3.0e-90 336.3 373 48.3
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 6.8e-90 335.1 293 55.3
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 6.8e-90 335.1 376 48.1
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 8.9e-90 334.7 317 55.5
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.2e-89 334.3 294 56.5
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.2e-89 334.3 292 56.5
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.5e-89 334.0 264 61.0
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 9.8e-89 331.3 292 56.2
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 1.1e-87 327.8 285 56.5
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 5.4e-87 325.5 285 56.5
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 5.4e-87 325.5 346 50.0
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.7e-86 323.2 364 50.8
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 1.3e-85 320.9 286 54.9
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 8.6e-85 318.2 341 51.6
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 9.5e-84 314.7 319 51.4
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.2e-83 314.3 269 57.6
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 2.3e-82 310.1 288 53.8
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 2.3e-82 310.1 305 52.8
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 6.8e-82 308.5 320 51.2
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 2.6e-81 306.6 261 57.5
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 2.9e-80 303.1 259 58.3
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 3.7e-80 302.8 327 48.6
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 3.2e-79 299.7 207 64.7
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 3.3e-76 289.7 197 67.0
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.3e-74 283.5 192 68.2
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 8.9e-74 281.6 182 68.1
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.3e-72 277.7 182 68.7
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 2.7e-70 270.0 258 52.7
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.7e-69 267.3 267 50.2
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.7e-69 267.3 267 50.2
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 3.9e-69 266.2 350 43.7
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 8.1e-67 258.5 177 67.8
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 1.4e-66 257.7 265 53.2
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 4.0e-66 256.1 285 47.4
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 7.6e-65 251.9 164 67.7
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 7.6e-65 251.9 336 40.8
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.3e-64 251.1 186 61.8
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 1.7e-61 240.7 168 63.7
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 3.0e-53 213.4 277 39.0
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.1e-52 211.5 197 53.8
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 6.2e-51 205.7 184 55.4
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 5.4e-47 192.6 141 58.2
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 5.4e-47 192.6 141 58.2
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 7.9e-46 188.7 264 39.8
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.1e-44 184.9 133 62.4
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 7.4e-44 182.2 133 61.7
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.6e-38 164.5 133 59.4
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 2.8e-35 153.7 183 47.5
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 2.0e-25 120.9 92 62.0
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 7.9e-22 109.0 277 27.1
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 1.0e-21 108.6 164 39.0
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 5.7e-20 102.8 88 61.4
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 6.9e-18 95.9 272 29.0
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 4.5e-17 93.2 269 29.0
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.5e-12 78.2 211 29.9
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 2.0e-09 67.8 115 39.1


User provided reference genes

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