Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 3.3e-245 851.3 430 100.0
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 9.0e-195 683.7 400 84.8
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 8.2e-188 660.6 400 82.8
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 8.5e-185 650.6 400 80.8
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 8.8e-182 640.6 401 79.1
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 5.3e-179 631.3 383 81.2
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 7.0e-179 630.9 400 78.8
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 6.5e-177 624.4 401 77.6
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 3.2e-176 622.1 392 78.8
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 7.2e-176 620.9 432 73.6
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 1.8e-174 616.3 402 77.6
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.3e-174 615.9 402 78.1
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 3.0e-174 615.5 402 77.6
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 1.7e-172 609.8 406 75.9
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 2.2e-172 609.4 401 76.6
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 1.4e-171 606.7 399 75.7
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 1.3e-169 600.1 409 74.1
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 3.8e-169 598.6 395 75.9
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 4.2e-168 595.1 402 73.4
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 5.5e-168 594.7 377 77.7
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 2.1e-167 592.8 398 73.9
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 2.7e-167 592.4 398 74.1
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 3.6e-167 592.0 401 74.1
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 8.0e-167 590.9 402 74.6
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 1.0e-166 590.5 393 74.6
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 4.0e-166 588.6 402 74.1
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 4.0e-166 588.6 402 72.4
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 5.2e-166 588.2 416 72.6
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 3.3e-165 585.5 404 72.8
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 1.3e-164 583.6 400 72.2
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 2.8e-164 582.4 404 72.0
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 6.3e-164 581.3 402 75.1
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 8.3e-164 580.9 389 73.8
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 1.8e-163 579.7 395 74.4
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 2.4e-163 579.3 398 71.4
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 3.1e-163 578.9 378 75.4
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 4.1e-163 578.6 401 71.3
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 7.0e-163 577.8 399 72.4
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 9.1e-163 577.4 402 71.1
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 1.6e-162 576.6 377 74.3
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 2.0e-162 576.2 362 77.3
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 2.0e-162 576.2 400 71.2
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 1.3e-161 573.5 341 81.2
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 1.7e-161 573.2 383 74.7
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 2.2e-161 572.8 402 71.9
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 3.8e-161 572.0 386 74.1
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 3.8e-161 572.0 386 73.8
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 1.5e-160 570.1 403 70.5
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 2.5e-160 569.3 398 70.6
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 3.2e-160 568.9 403 70.5
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 7.2e-160 567.8 384 72.1
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.2e-159 567.0 403 72.0
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 2.1e-159 566.2 341 78.6
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 2.1e-159 566.2 400 71.2
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 2.1e-159 566.2 400 70.2
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 3.6e-159 565.5 400 71.2
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 1.8e-158 563.1 401 71.6
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 1.8e-158 563.1 401 71.6
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 3.0e-158 562.4 398 70.6
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 8.8e-158 560.8 397 71.3
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 8.8e-158 560.8 403 69.7
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 1.5e-157 560.1 398 70.1
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 3.4e-157 558.9 400 69.8
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 5.7e-157 558.1 386 71.8
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 7.5e-157 557.8 429 66.7
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 7.5e-157 557.8 401 69.6
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 1.7e-156 556.6 401 70.8
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 1.7e-156 556.6 398 69.6
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 2.2e-156 556.2 399 70.7
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 6.3e-156 554.7 343 78.1
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 8.3e-156 554.3 418 69.1
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 1.1e-155 553.9 403 69.7
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 1.4e-155 553.5 400 69.0
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 2.4e-155 552.7 353 75.9
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 4.1e-155 552.0 377 70.6
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 5.4e-155 551.6 404 69.1
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 5.4e-155 551.6 398 69.1
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 7.0e-155 551.2 341 77.4
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 7.0e-155 551.2 399 69.9
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 1.6e-154 550.1 383 70.8
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 5.9e-154 548.1 397 68.8
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 1.0e-153 547.4 341 77.1
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 1.0e-153 547.4 363 73.3
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 1.7e-153 546.6 341 76.5
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 1.7e-153 546.6 366 73.0
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 2.9e-153 545.8 325 80.6
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 3.8e-153 545.4 400 69.2
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 5.0e-153 545.0 330 79.1
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 5.0e-153 545.0 341 76.5
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 6.6e-153 544.7 390 71.0
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 6.6e-153 544.7 418 67.2
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 9.5e-152 540.8 367 71.9
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 2.1e-151 539.7 403 69.5
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 8.0e-151 537.7 372 71.8
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 8.0e-151 537.7 341 76.0
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 8.0e-151 537.7 366 71.6
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 1.4e-150 537.0 367 71.9
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 1.8e-150 536.6 399 67.2
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 4.0e-150 535.4 312 81.7
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 3.7e-148 528.9 367 68.9
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 2.4e-147 526.2 360 73.6
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 4.1e-147 525.4 344 71.2
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 1.2e-146 523.9 367 70.3
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 4.5e-146 521.9 360 69.4
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 1.7e-145 520.0 367 68.7
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 8.0e-143 511.1 401 67.8
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 3.4e-141 505.8 381 68.5
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 1.4e-139 500.4 460 59.6
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 5.4e-139 498.4 312 78.2
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 9.2e-139 497.7 403 63.8
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 1.2e-138 497.3 371 64.7
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 1.3e-137 493.8 290 82.8
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 3.9e-137 492.3 389 66.1
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 2.1e-135 486.5 389 65.3
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 1.4e-134 483.8 568 48.8
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 8.6e-129 464.5 367 62.1
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 1.2e-122 444.1 348 61.8
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 8.4e-116 421.4 287 73.5
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.4e-110 404.1 394 57.6
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 6.1e-82 308.9 190 81.6
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 1.9e-67 260.8 371 41.8
Cpa.g.sc62.58 Carica papaya HOM05D005562 ORTHO05D007785 1.0e-65 255.0 147 79.6
DCAR_021731 Daucus carota HOM05D005562 ORTHO05D007785 8.2e-63 245.4 295 51.9
HanXRQChr10g0318401 Helianthus annuus HOM05D005562 ORTHO05D007785 1.4e-62 244.6 216 56.9
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 6.5e-52 209.1 179 63.7
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 4.0e-49 199.9 110 88.2
Cpa.g.sc26.106 Carica papaya HOM05D005562 ORTHO05D007785 8.8e-49 198.7 128 75.0
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 2.1e-42 177.6 110 78.2
arahy.Tifrunner.gnm1.ann1.Q8AXKZ Arachis hypogaea HOM05D005562 ORTHO05D007785 2.9e-31 140.6 81 75.3
Cfa027024 Carpinus fangiana HOM05D005562 ORTHO05D121372 1.4e-30 138.3 351 29.6
Actinidia17845 Actinidia chinensis HOM05D005562 ORTHO05D030745 9.5e-27 125.6 145 49.7
SEGI_28239 Sequoiadendron giganteum HOM05D005562 ORTHO05D007785 6.8e-25 119.4 66 75.8
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 1.6e-13 81.6 53 73.6
CSS0029422 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D111180 6.6e-12 76.3 93 48.4
Glyma.08G079000 Glycine max HOM05D005562 ORTHO05D007785 8.9e-09 65.9 45 64.4
Glyma.08G079050 Glycine max HOM05D005562 ORTHO05D213306 7.1e-06 56.2 36 69.4


User provided reference genes

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