Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.3e-143 513.1 255 100.0
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 2.3e-89 332.8 241 72.6
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.4e-65 253.8 259 54.1
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.9e-63 245.4 258 52.7
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 4.0e-57 225.7 259 51.4
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 2.6e-56 223.0 254 50.4
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 5.1e-52 208.8 263 44.9
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.2e-48 197.6 257 44.7
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.5e-48 197.2 255 47.1
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 2.0e-48 196.8 259 44.4
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 1.7e-47 193.7 263 43.0
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 2.9e-47 193.0 267 43.4
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 3.7e-47 192.6 257 45.5
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 6.4e-47 191.8 259 43.6
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 8.3e-47 191.4 255 42.4
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 1.1e-46 191.0 262 42.0
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 2.4e-46 189.9 260 45.0
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 3.2e-46 189.5 261 42.1
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 3.2e-46 189.5 258 45.7
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 4.1e-46 189.1 263 41.8
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.2e-45 187.6 263 41.8
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.2e-45 187.6 266 44.4
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 2.1e-45 186.8 260 43.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.7e-45 186.4 261 42.9
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 3.5e-45 186.0 261 42.9
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 7.8e-45 184.9 259 42.1
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.0e-44 184.5 255 43.1
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 5.1e-44 182.2 243 43.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 5.1e-44 182.2 259 41.7
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.3e-43 179.1 256 44.9
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 8.1e-42 174.9 247 44.9
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 4.4e-40 169.1 247 40.5
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 7.6e-40 168.3 258 43.4
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 2.9e-39 166.4 282 37.2
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 8.4e-39 164.9 278 38.8
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.4e-38 163.3 253 41.9
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.4e-38 163.3 253 41.9
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 3.2e-38 162.9 254 41.7
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.7e-37 159.8 246 41.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.7e-36 157.1 301 34.6
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 2.3e-36 156.8 284 38.4
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 2.3e-36 156.8 282 36.5
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 5.1e-36 155.6 260 39.6
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 4.4e-32 142.5 253 37.9
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 3.8e-31 139.4 252 34.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 2.4e-30 136.7 240 37.9
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 2.8e-26 123.2 275 35.3
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 3.1e-25 119.8 162 43.8
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 8.4e-23 111.7 186 40.3
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 6.0e-21 105.5 291 30.2
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 7.9e-21 105.1 161 40.4
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 3.9e-20 102.8 166 41.0
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 8.7e-20 101.7 76 61.8
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 9.6e-19 98.2 230 32.6
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.3e-18 97.8 168 39.9
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 4.8e-18 95.9 151 41.1
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 2.0e-16 90.5 156 41.7
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 2.0e-16 90.5 156 41.7
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 4.9e-15 85.9 59 66.1
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-14 83.6 110 40.9
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 3.2e-14 83.2 147 38.1
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-14 82.8 156 40.4
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 5.1e-12 75.9 45 73.3


User provided reference genes

Program Settings