Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13101 Striga asiatica HOM05D001046 ORTHO05D005883 5.0e-135 484.6 268 100.0
SGA_v2.0_scaffold32G13175 Striga asiatica HOM05D001046 ORTHO05D005883 3.9e-71 272.3 223 76.2
SGA_v2.0_scaffold16G07861 Striga asiatica HOM05D001046 ORTHO05D005883 7.9e-64 248.1 224 65.6
Migut.L01124 Erythranthe guttata HOM05D001046 ORTHO05D005883 6.9e-60 235.0 227 59.5
MSTRG.7703 Avicennia marina HOM05D001046 ORTHO05D005883 5.1e-55 218.8 227 55.9
Oeu002624.1 Olea europaea HOM05D001046 ORTHO05D005883 1.2e-51 207.6 230 52.2
SalBow8G4857 Salvia bowleyana HOM05D001046 ORTHO05D005883 2.2e-50 203.4 228 53.1
Dinv27415 Davidia involucrata HOM05D001046 ORTHO05D005883 3.9e-47 192.6 228 49.6
CSS0000214 Camellia sinensis var. sinensis HOM05D001046 ORTHO05D005883 2.6e-46 189.9 227 49.8
HanXRQChr15g0475941 Helianthus annuus HOM05D001046 ORTHO05D005883 1.7e-45 187.2 227 47.1
Nitab4.5_0006347g0030 Nicotiana tabacum HOM05D001046 ORTHO05D005883 3.7e-45 186.0 230 47.8
Lsat_1_v5_gn_3_62681 Lactuca sativa HOM05D001046 ORTHO05D005883 4.8e-45 185.7 227 47.1
unitig_699.g19897 Utricularia gibba HOM05D001046 ORTHO05D005883 2.4e-44 183.3 222 46.8
ECA246G0060 Erigeron canadensis HOM05D001046 ORTHO05D005883 5.3e-44 182.2 227 45.8
Cc11_g11040 Coffea canephora HOM05D001046 ORTHO05D005883 2.0e-43 180.3 225 48.9
Solyc05g010160.3 Solanum lycopersicum HOM05D001046 ORTHO05D005883 2.6e-43 179.9 230 46.5
Sopen05g005940 Solanum pennellii HOM05D001046 ORTHO05D005883 1.3e-42 177.6 230 46.1
Rhsim08G0040600 Rhododendron simsii HOM05D001046 ORTHO05D005883 1.7e-42 177.2 230 47.4
CAN.G184.47 Capsicum annuum HOM05D001046 ORTHO05D005883 8.5e-42 174.9 229 46.7
Nitab4.5_0000259g0330 Nicotiana tabacum HOM05D001046 ORTHO05D005883 1.1e-41 174.5 224 46.9
MBI15_g18373_MAGBIO Magnolia biondii HOM05D001046 ORTHO05D005883 2.5e-41 173.3 235 44.7
GSVIVG01012023001 Vitis vinifera HOM05D001046 ORTHO05D005883 5.5e-41 172.2 228 46.1
Gorai.008G173700 Gossypium raimondii HOM05D001046 ORTHO05D005883 9.4e-41 171.4 225 44.9
vmacro18368 Vaccinium macrocarpon HOM05D001046 ORTHO05D005883 1.2e-40 171.0 225 47.1
Thecc.02G315500 Theobroma cacao HOM05D001046 ORTHO05D005883 2.1e-40 170.2 228 45.2
Actinidia30169 Actinidia chinensis HOM05D001046 ORTHO05D005883 2.7e-40 169.9 230 45.7
TAR629G1491 Trochodendron aralioides HOM05D001046 ORTHO05D005883 3.6e-40 169.5 236 44.9
Gohir.A12G157800 Gossypium hirsutum HOM05D001046 ORTHO05D005883 4.7e-40 169.1 225 44.4
Gohir.D12G160700 Gossypium hirsutum HOM05D001046 ORTHO05D005883 8.0e-40 168.3 225 44.4
Psat0s251g0040 Pisum sativum HOM05D001046 ORTHO05D005883 1.8e-39 167.2 228 44.3
Cfa008799 Carpinus fangiana HOM05D001046 ORTHO05D005883 3.0e-39 166.4 227 44.1
Duzib248G1558 Durio zibethinus HOM05D001046 ORTHO05D005883 5.2e-39 165.6 229 45.4
Medtr0010s0220 Medicago truncatula HOM05D001046 ORTHO05D005883 6.7e-39 165.2 228 43.0
Prupe.1G300500 Prunus persica HOM05D001046 ORTHO05D005883 8.8e-39 164.9 228 44.3
Sabra08G0083000 Salix brachista HOM05D001046 ORTHO05D005883 1.5e-38 164.1 226 44.7
Nn3g17629 Nelumbo nucifera HOM05D001046 ORTHO05D005883 4.4e-38 162.5 226 42.9
Potri.008G109300 Populus trichocarpa HOM05D001046 ORTHO05D005883 4.4e-38 162.5 226 45.6
Potri.T108626 Populus trichocarpa HOM05D001046 ORTHO05D005883 5.7e-38 162.2 225 44.9
TWI79G0779 Tripterygium wilfordii HOM05D001046 ORTHO05D005883 7.4e-38 161.8 225 44.9
Ciclev10030592m.g Citrus clementina HOM05D001046 ORTHO05D005883 2.8e-37 159.8 228 43.0
Atru.chr11.1438 Acer truncatum HOM05D001046 ORTHO05D005883 3.7e-37 159.5 229 43.7
Atru.chr11.1468 Acer truncatum HOM05D001046 ORTHO05D005883 3.7e-37 159.5 229 43.7
Lj2g0002950 Lotus japonicus HOM05D001046 ORTHO05D005883 6.3e-37 158.7 228 42.1
CiPaw.05G117600 Carya illinoinensis HOM05D001046 ORTHO05D005883 1.4e-36 157.5 228 49.6
Haze_11811 Corylus avellana HOM05D001046 ORTHO05D005883 1.4e-36 157.5 227 43.6
FvH4_4g28521 Fragaria vesca HOM05D001046 ORTHO05D005883 1.4e-36 157.5 226 42.9
Sc14g0007590 Simmondsia chinensis HOM05D001046 ORTHO05D005883 1.4e-36 157.5 226 43.4
MD16G1051700 Malus domestica HOM05D001046 ORTHO05D005883 1.8e-36 157.1 225 43.1
CANSAT64G1908 Cannabis sativa HOM05D001046 ORTHO05D005883 5.3e-36 155.6 226 42.9
Hund25120 Selenicereus undatus HOM05D001046 ORTHO05D005883 5.3e-36 155.6 233 41.6
arahy.Tifrunner.gnm1.ann1.L5PVB5 Arachis hypogaea HOM05D001046 ORTHO05D005883 9.1e-36 154.8 229 41.0
FAN12G0380 Fragaria x ananassa HOM05D001046 ORTHO05D005883 1.2e-35 154.5 259 39.8
RcHm_v2.0_Chr4g0436541 Rosa chinensis HOM05D001046 ORTHO05D005883 1.2e-35 154.5 226 43.4
arahy.Tifrunner.gnm1.ann1.X1G7WL Arachis hypogaea HOM05D001046 ORTHO05D005883 1.6e-35 154.1 228 41.2
Phvul.003G034100 Phaseolus vulgaris HOM05D001046 ORTHO05D005883 2.6e-35 153.3 228 41.7
AUR62002966 Chenopodium quinoa HOM05D001046 ORTHO05D005883 3.5e-35 152.9 227 43.6
Glyma.01G093902 Glycine max HOM05D001046 ORTHO05D005883 4.5e-35 152.5 228 41.2
Lalb_Chr04g0255081 Lupinus albus HOM05D001046 ORTHO05D005883 4.5e-35 152.5 221 43.4
Manes.06G076400 Manihot esculenta HOM05D001046 ORTHO05D005883 7.7e-35 151.8 225 44.0
FAN17G2519 Fragaria x ananassa HOM05D001046 ORTHO05D005883 8.5e-34 148.3 232 41.4
Lj3C1023G11 Lonicera japonica HOM05D001046 ORTHO05D005883 1.9e-33 147.1 261 38.7
ATR0691G253 Amborella trichopoda HOM05D001046 ORTHO05D005883 7.2e-33 145.2 223 39.5
AT1G26170 Arabidopsis thaliana HOM05D001046 ORTHO05D005883 7.2e-33 145.2 227 41.4
AUR62007774 Chenopodium quinoa HOM05D001046 ORTHO05D005883 7.2e-33 145.2 228 41.2
Peaxi162Scf00188g00433 Petunia axillaris HOM05D001046 ORTHO05D005883 7.2e-33 145.2 183 49.2
Ah.03g138130 Amaranthus hybridus HOM05D001046 ORTHO05D005883 9.4e-33 144.8 243 45.7
Glyma.02G128900 Glycine max HOM05D001046 ORTHO05D005883 9.4e-33 144.8 228 40.4
PSO017G2748 Papaver somniferum HOM05D001046 ORTHO05D005883 2.1e-32 143.7 225 42.2
BcaB03g14057 Brassica carinata HOM05D001046 ORTHO05D005883 2.7e-32 143.3 226 39.4
Eucgr.B03078 Eucalyptus grandis HOM05D001046 ORTHO05D005883 3.6e-32 142.9 227 41.9
Thhalv10006742m.g Eutrema salsugineum HOM05D001046 ORTHO05D005883 3.6e-32 142.9 226 39.4
C07p19150 Brassica napus HOM05D001046 ORTHO05D005883 4.7e-32 142.5 226 38.9
CARHR025740 Cardamine hirsuta HOM05D001046 ORTHO05D005883 1.0e-31 141.4 225 40.9
PSO478G0796 Papaver somniferum HOM05D001046 ORTHO05D005883 1.0e-31 141.4 228 41.2
BcaC06g35168 Brassica carinata HOM05D001046 ORTHO05D005883 1.4e-31 141.0 226 38.5
A07p12760 Brassica napus HOM05D001046 ORTHO05D005883 5.2e-31 139.0 240 37.1
COL.COLO4_27721 Corchorus olitorius HOM05D001046 ORTHO05D005883 5.2e-31 139.0 194 43.3
AL1G39580 Arabidopsis lyrata HOM05D001046 ORTHO05D005883 6.8e-31 138.7 227 40.5
Aqoxy3G00421 Aquilegia oxysepala HOM05D001046 ORTHO05D005883 8.8e-31 138.3 203 43.8
Carub.0001s2479 Capsella rubella HOM05D001046 ORTHO05D005883 2.0e-30 137.1 227 40.1
Sp1g22490 Schrenkiella parvula HOM05D001046 ORTHO05D005883 2.0e-30 137.1 226 38.9
CsaV3_5G033760 Cucumis sativus L. HOM05D001046 ORTHO05D005883 9.7e-30 134.8 226 37.6
THA.LOC104808446 Tarenaya hassleriana HOM05D001046 ORTHO05D005883 3.7e-29 132.9 226 38.1
Aa31LG7G8840 Aethionema arabicum HOM05D001046 ORTHO05D005883 1.1e-28 131.3 222 39.2
EL10Ac6g14562 Beta vulgaris HOM05D001046 ORTHO05D005883 1.4e-28 131.0 207 44.9
QL03p044493 Quercus lobata HOM05D001046 ORTHO05D005883 1.4e-28 131.0 188 41.5
ClCG05G023270 Citrullus lanatus HOM05D001046 ORTHO05D005883 1.8e-28 130.6 223 38.6
HPP92_018028 Vanilla planifolia HOM05D001046 ORTHO05D005883 2.7e-27 126.7 231 39.0
MELO3C012192.2 Cucumis melo HOM05D001046 ORTHO05D005883 4.5e-27 125.9 256 34.0
PGR102G1932 Punica granatum HOM05D001046 ORTHO05D005883 1.3e-26 124.4 210 38.6
FAN22G0985 Fragaria x ananassa HOM05D001046 ORTHO05D005883 3.2e-25 119.8 195 41.0
FAN07G2005 Fragaria x ananassa HOM05D001046 ORTHO05D005883 1.2e-24 117.9 201 38.3
Ca_30097_v3 Cicer arietinum L. HOM05D001046 ORTHO05D005883 1.6e-24 117.5 184 39.7
CDE04G1715 Ceratophyllum demersum HOM05D001046 ORTHO05D005883 3.6e-24 116.3 210 37.6
SEGI_15773 Sequoiadendron giganteum HOM05D001046 ORTHO05D005883 6.1e-24 115.5 231 34.2
Sed0023728 Sechium edule HOM05D001046 ORTHO05D005883 1.0e-23 114.8 195 39.0
BolC7t42425H Brassica oleracea HOM05D001046 ORTHO05D005883 5.4e-20 102.4 240 29.6
VMungo1215G2127 Vigna mungo HOM05D001046 ORTHO05D005883 2.3e-18 97.1 105 50.5
DCAR_023709 Daucus carota HOM05D001046 ORTHO05D005883 2.9e-18 96.7 138 40.6
Pp3c3_32130 Physcomitrium patens HOM05D001046 ORTHO05D005883 5.2e-15 85.9 232 30.6
CBR_g23906 Chara braunii HOM05D001046 ORTHO05D005883 4.4e-14 82.8 234 30.3
Psat0ss9065g0080 Pisum sativum HOM05D003718 ORTHO05D004402 1.6e-11 74.3 109 40.4
VMungo1215G0456 Vigna mungo HOM05D001046 ORTHO05D005883 1.7e-10 70.9 75 41.3
CBR_g22326 Chara braunii HOM05D001046 ORTHO05D005883 6.6e-10 68.9 246 30.9
SMO144G0070 Selaginella moellendorffii HOM05D001046 ORTHO05D005883 2.5e-09 67.0 109 42.2
SGA_v2.0_scaffold32G13117 Striga asiatica HOM05D000835 ORTHO05D002122 1.2e-08 64.7 96 42.7


User provided reference genes

Program Settings