Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G13060 Striga asiatica HOM05D003792 ORTHO05D003195 1.8e-188 662.5 352 100.0
MSTRG.20159 Avicennia marina HOM05D011234 ORTHO05D003195 2.4e-44 183.7 337 38.9
Migut.B00353 Erythranthe guttata HOM05D011234 ORTHO05D003195 1.0e-42 178.3 252 45.6
SalBow6G6536 Salvia bowleyana HOM05D011234 ORTHO05D003195 2.6e-38 163.7 251 42.6
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 4.4e-30 136.3 230 42.2
Migut.N01186 Erythranthe guttata HOM05D011234 ORTHO05D003195 6.2e-24 115.9 221 38.0
Oeu007289.1 Olea europaea HOM05D011234 ORTHO05D003195 2.9e-21 107.1 234 35.5
Actinidia00436 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.9e-17 94.4 250 33.6
Cc02_g18840 Coffea canephora HOM05D011234 ORTHO05D003195 3.6e-16 90.1 237 32.9
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 1.8e-15 87.8 259 30.9
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 2.3e-15 87.4 257 31.1
GSVIVG01031734001 Vitis vinifera HOM05D003792 ORTHO05D003195 2.3e-15 87.4 278 29.5
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 3.1e-15 87.0 230 33.0
Haze_10092 Corylus avellana HOM05D003792 ORTHO05D003195 5.8e-14 82.8 289 28.4
Lj4g0023306 Lotus japonicus HOM05D003792 ORTHO05D003195 5.8e-14 82.8 261 34.1
Dinv39314 Davidia involucrata HOM05D003792 ORTHO05D003195 2.2e-13 80.9 217 30.9
Peaxi162Scf00016g01956 Petunia axillaris HOM05D011234 ORTHO05D003195 8.3e-13 79.0 265 29.1
Lsat_1_v5_gn_9_109780 Lactuca sativa HOM05D003465 ORTHO05D004034 2.4e-12 77.4 108 41.7
Sopen01g050330 Solanum pennellii HOM05D011234 ORTHO05D003195 4.1e-12 76.6 249 29.7
TAR381G1051 Trochodendron aralioides HOM05D003792 ORTHO05D003195 5.4e-12 76.3 238 31.1
MSTRG.5362 Avicennia marina HOM05D011234 ORTHO05D003195 1.2e-11 75.1 201 31.8
Dinv35957 Davidia involucrata HOM05D003792 ORTHO05D003195 1.2e-11 75.1 265 28.7
CANSAT25G2784 Cannabis sativa HOM05D003792 ORTHO05D003195 2.7e-11 73.9 234 29.1
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 2.7e-11 73.9 256 30.9
Solyc01g108100.3 Solanum lycopersicum HOM05D011234 ORTHO05D003195 2.7e-11 73.9 258 27.9
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 1.0e-10 72.0 234 28.6
TAR376G0615 Trochodendron aralioides HOM05D003792 ORTHO05D003195 2.3e-10 70.9 263 29.3
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 3.0e-10 70.5 266 28.2
vmacro02043 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 3.9e-10 70.1 77 45.5
CSS0021091 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 5.1e-10 69.7 247 28.3
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 8.6e-10 68.9 130 35.4
GSVIVG01009490001 Vitis vinifera HOM05D003792 ORTHO05D003195 8.6e-10 68.9 232 28.0
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 1.1e-09 68.6 208 31.2
PGSC0003DMG401025788 Solanum tuberosum HOM05D011234 ORTHO05D003195 1.5e-09 68.2 263 28.5
CARHR181240 Cardamine hirsuta HOM05D003792 ORTHO05D003195 1.9e-09 67.8 200 28.5
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 4.3e-09 66.6 202 27.2
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.6e-09 66.2 140 35.7
TPR.G12693 Trifolium pratense HOM05D003792 ORTHO05D003195 5.6e-09 66.2 246 30.5
VMungo0251G0642 Vigna mungo HOM05D003792 ORTHO05D003195 5.6e-09 66.2 221 29.4
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 7.3e-09 65.9 141 33.3
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 7.3e-09 65.9 244 27.9
CiPaw.05G007500 Carya illinoinensis HOM05D003792 ORTHO05D003195 9.5e-09 65.5 138 33.3
Actinidia23277 Actinidia chinensis HOM05D003792 ORTHO05D003195 1.2e-08 65.1 241 29.9
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.6e-08 64.7 140 35.0
PSO210G6487 Papaver somniferum HOM05D003792 ORTHO05D003195 1.6e-08 64.7 212 28.3
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 2.1e-08 64.3 128 35.2
DCAR_019451 Daucus carota HOM05D003792 ORTHO05D003195 2.1e-08 64.3 215 28.8
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 2.8e-08 63.9 205 28.3
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 2.8e-08 63.9 171 31.0
Rhsim06G0050200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.8e-08 63.9 208 29.8
BcaC02g10794 Brassica carinata HOM05D003792 ORTHO05D003195 3.6e-08 63.5 207 30.4
A06p48190 Brassica napus HOM05D003792 ORTHO05D003195 3.6e-08 63.5 237 29.5
C04p25040 Brassica napus HOM05D003792 ORTHO05D003195 3.6e-08 63.5 207 29.5
BolC4t24005H Brassica oleracea HOM05D003792 ORTHO05D003195 3.6e-08 63.5 207 29.5
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 3.6e-08 63.5 263 28.9
Potri.002G125900 Populus trichocarpa HOM05D003792 ORTHO05D003195 4.7e-08 63.2 244 29.1
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 4.7e-08 63.2 82 40.2
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 6.2e-08 62.8 209 29.2
Thhalv10003264m.g Eutrema salsugineum HOM05D003792 ORTHO05D003195 8.1e-08 62.4 235 27.7
Nitab4.5_0007480g0060 Nicotiana tabacum HOM05D011234 ORTHO05D003195 8.1e-08 62.4 123 39.0
Sabra14G0019900 Salix brachista HOM05D003792 ORTHO05D003195 8.1e-08 62.4 239 28.9
Sp2g07640 Schrenkiella parvula HOM05D003792 ORTHO05D003195 8.1e-08 62.4 213 31.0
SpUn0117_0010 Schrenkiella parvula HOM05D003792 ORTHO05D003195 8.1e-08 62.4 213 31.0
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 1.1e-07 62.0 251 27.5
Aa31LG9G12960 Aethionema arabicum HOM05D003792 ORTHO05D003195 1.4e-07 61.6 197 29.4
Glyma.02G131800 Glycine max HOM05D003792 ORTHO05D003195 1.4e-07 61.6 236 28.0
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.4e-07 61.6 108 36.1
vmacro21518 Vaccinium macrocarpon HOM05D003792 ORTHO05D003195 1.4e-07 61.6 212 30.2
THA.LOC104812575 Tarenaya hassleriana HOM05D003792 ORTHO05D003195 1.8e-07 61.2 243 29.2
PGSC0003DMG400006224 Solanum tuberosum HOM05D011234 ORTHO05D003195 2.3e-07 60.8 256 27.0
Cpa.g.sc49.18 Carica papaya HOM05D003792 ORTHO05D003195 4.0e-07 60.1 170 30.0
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 5.2e-07 59.7 125 34.4
TWI36G1706 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 5.2e-07 59.7 76 38.2
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 6.8e-07 59.3 125 40.0
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 6.8e-07 59.3 193 31.1
Manes.10G080100 Manihot esculenta HOM05D003792 ORTHO05D003195 6.8e-07 59.3 127 35.4
TWI36G0999 Tripterygium wilfordii HOM05D003792 ORTHO05D003195 6.8e-07 59.3 133 32.3
Actinidia22631 Actinidia chinensis HOM05D003792 ORTHO05D003195 8.9e-07 58.9 238 29.8
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 8.9e-07 58.9 238 28.6
Cfa018558 Carpinus fangiana HOM05D000207 ORTHO05D000606 8.9e-07 58.9 236 27.1
CiPaw.16G043500 Carya illinoinensis HOM05D003792 ORTHO05D003195 8.9e-07 58.9 198 27.8
Eucgr.F00223 Eucalyptus grandis HOM05D003792 ORTHO05D003195 8.9e-07 58.9 226 29.6
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 8.9e-07 58.9 209 27.8
Potri.014G029000 Populus trichocarpa HOM05D003792 ORTHO05D003195 8.9e-07 58.9 238 27.3
PSO170G6463 Papaver somniferum HOM05D003792 ORTHO05D003195 1.2e-06 58.5 233 27.0
QL02p004753 Quercus lobata HOM05D003792 ORTHO05D003195 1.2e-06 58.5 217 26.3
TAR628G0921 Trochodendron aralioides HOM05D003792 ORTHO05D003195 1.2e-06 58.5 107 35.5
CiPaw.15G055900 Carya illinoinensis HOM05D003792 ORTHO05D003195 1.5e-06 58.2 236 27.5
HanXRQChr09g0267581 Helianthus annuus HOM05D003792 ORTHO05D003195 1.5e-06 58.2 199 27.6
unitig_21.g20741 Utricularia gibba HOM05D046614 ORTHO05D051510 2.0e-06 57.8 130 30.8
Actinidia29872 Actinidia chinensis HOM05D004168 ORTHO05D004999 2.6e-06 57.4 224 28.6
BolC9t55450H Brassica oleracea HOM05D003792 ORTHO05D003195 2.6e-06 57.4 226 27.4
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 2.6e-06 57.4 211 26.5
Gorai.009G212200 Gossypium raimondii HOM05D003792 ORTHO05D003195 3.4e-06 57.0 133 32.3
BcaB03g11864 Brassica carinata HOM05D009953 ORTHO05D003195 4.4e-06 56.6 108 37.0
BraA06t27688Z Brassica rapa HOM05D003792 ORTHO05D003195 4.4e-06 56.6 230 28.7
Thhalv10026267m.g Eutrema salsugineum HOM05D009953 ORTHO05D003195 5.8e-06 56.2 140 32.9
Sc15g0006120 Simmondsia chinensis HOM05D004168 ORTHO05D003195 5.8e-06 56.2 105 35.2
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 7.6e-06 55.8 199 27.6
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 7.6e-06 55.8 112 33.9
Gohir.D05G205900 Gossypium hirsutum HOM05D003792 ORTHO05D003195 9.9e-06 55.5 85 38.8
MD08G1101100 Malus domestica HOM05D003792 ORTHO05D003195 9.9e-06 55.5 234 25.6


User provided reference genes

Program Settings