Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G12994 Striga asiatica HOM05D006229 ORTHO05D007190 0.0e+00 1171.0 626 100.0
Oeu013795.1 Olea europaea HOM05D006229 ORTHO05D007190 1.6e-179 633.6 667 57.3
Dinv15812 Davidia involucrata HOM05D006229 ORTHO05D007190 1.8e-175 620.2 658 57.4
CSS0000082 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 3.1e-167 592.8 666 55.1
CSS0031624 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.8e-167 591.7 666 55.0
Actinidia00366 Actinidia chinensis HOM05D006229 ORTHO05D007190 1.3e-165 587.4 657 54.8
GSVIVG01037817001 Vitis vinifera HOM05D006229 ORTHO05D007190 3.9e-162 575.9 656 54.3
Solyc01g106950.3 Solanum lycopersicum HOM05D006229 ORTHO05D007190 6.6e-162 575.1 647 55.0
Cc02_g19910 Coffea canephora HOM05D006229 ORTHO05D007190 8.6e-162 574.7 664 53.8
Sopen01g049230 Solanum pennellii HOM05D006229 ORTHO05D007190 1.5e-161 573.9 647 55.0
Cfa004667 Carpinus fangiana HOM05D006229 ORTHO05D007190 2.5e-161 573.2 668 53.0
vmacro01958 Vaccinium macrocarpon HOM05D006229 ORTHO05D007190 1.8e-159 567.0 668 53.0
Peaxi162Scf00016g02933 Petunia axillaris HOM05D006229 ORTHO05D007190 1.2e-158 564.3 655 53.7
Potri.009G087100 Populus trichocarpa HOM05D006229 ORTHO05D007190 3.4e-158 562.8 663 52.6
Thecc.02G118000 Theobroma cacao HOM05D006229 ORTHO05D007190 1.3e-157 560.8 650 51.8
Nn1g04542 Nelumbo nucifera HOM05D006229 ORTHO05D007190 1.1e-156 557.8 665 52.9
Atru.chr5.2332 Acer truncatum HOM05D006229 ORTHO05D007190 2.4e-156 556.6 654 54.0
arahy.Tifrunner.gnm1.ann1.U3HZ1H Arachis hypogaea HOM05D006229 ORTHO05D007190 1.6e-155 553.9 649 52.9
RhsimUnG0124300 Rhododendron simsii HOM05D006229 ORTHO05D007190 3.5e-155 552.7 694 51.7
Rhsim11G0152600 Rhododendron simsii HOM05D006229 ORTHO05D007190 4.6e-155 552.4 686 52.3
TAR381G1278 Trochodendron aralioides HOM05D006229 ORTHO05D007190 7.8e-155 551.6 664 52.3
Potri.001G292800 Populus trichocarpa HOM05D006229 ORTHO05D007190 1.3e-154 550.8 656 51.7
TAR381G0595 Trochodendron aralioides HOM05D006229 ORTHO05D007190 1.1e-153 547.7 664 52.0
Lj5C219G10 Lonicera japonica HOM05D006229 ORTHO05D007190 1.5e-153 547.4 644 52.2
MSTRG.16677 Avicennia marina HOM05D006229 ORTHO05D007190 3.3e-153 546.2 520 60.6
Nitab4.5_0002040g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 4.3e-153 545.8 625 55.4
arahy.Tifrunner.gnm1.ann1.WVEK9H Arachis hypogaea HOM05D006229 ORTHO05D007190 8.1e-152 541.6 633 53.2
Glyma.01G242300 Glycine max HOM05D006229 ORTHO05D007190 8.1e-152 541.6 652 52.8
Nitab4.5_0011076g0030 Nicotiana tabacum HOM05D006229 ORTHO05D007190 3.1e-151 539.7 673 52.6
TPR.G8306 Trifolium pratense HOM05D006229 ORTHO05D007190 7.6e-150 535.0 651 51.2
Gohir.D04G159900 Gossypium hirsutum HOM05D006229 ORTHO05D007190 2.9e-149 533.1 668 50.3
Gorai.012G147300 Gossypium raimondii HOM05D006229 ORTHO05D007190 2.9e-149 533.1 668 50.3
Prupe.8G146100 Prunus persica HOM05D006229 ORTHO05D007190 4.9e-149 532.3 656 50.8
Ciclev10027970m.g Citrus clementina HOM05D006229 ORTHO05D007190 1.1e-148 531.2 650 51.1
Hma1.2p1_0661F.1_g198200 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 1.9e-148 530.4 634 53.5
CANSAT25G2732 Cannabis sativa HOM05D006229 ORTHO05D007190 4.1e-148 529.3 661 50.8
TWI59G1401 Tripterygium wilfordii HOM05D006229 ORTHO05D007190 1.2e-147 527.7 663 49.9
Haze_10264 Corylus avellana HOM05D006229 ORTHO05D007190 3.5e-147 526.2 668 50.0
COL.COLO4_32503 Corchorus olitorius HOM05D006229 ORTHO05D007190 6.0e-147 525.4 616 52.3
Sabra09G0066700 Salix brachista HOM05D006229 ORTHO05D007190 6.0e-147 525.4 690 49.1
Lalb_Chr09g0319621 Lupinus albus HOM05D006229 ORTHO05D007190 7.8e-147 525.0 651 50.4
CANSAT25G3217 Cannabis sativa HOM05D006229 ORTHO05D007190 3.9e-146 522.7 661 50.4
Ca_24360_v3 Cicer arietinum L. HOM05D006229 ORTHO05D007190 3.9e-146 522.7 657 50.7
VMungo1215G0068 Vigna mungo HOM05D006229 ORTHO05D007190 2.5e-145 520.0 653 51.0
FvH4_2g03770 Fragaria vesca HOM05D006229 ORTHO05D007190 7.3e-145 518.5 648 50.9
PSO541G3151 Papaver somniferum HOM05D006229 ORTHO05D007190 4.7e-144 515.8 647 48.4
RcHm_v2.0_Chr6g0252731 Rosa chinensis HOM05D006229 ORTHO05D007190 6.2e-144 515.4 679 48.6
Aqoxy6G02594 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 1.8e-143 513.8 648 50.2
Phvul.002G051500 Phaseolus vulgaris HOM05D006229 ORTHO05D007190 7.6e-142 508.4 653 50.8
Medtr5g005010 Medicago truncatula HOM05D006229 ORTHO05D007190 3.2e-140 503.1 670 48.2
Actinidia27991 Actinidia chinensis HOM05D006229 ORTHO05D007190 7.1e-140 501.9 615 51.7
MD10G1106700 Malus domestica HOM05D006229 ORTHO05D007190 1.2e-139 501.1 637 50.2
ECA240G1909 Erigeron canadensis HOM05D006229 ORTHO05D007190 1.6e-139 500.7 645 48.2
MD05G1101600 Malus domestica HOM05D006229 ORTHO05D007190 1.6e-139 500.7 645 49.9
CsaV3_7G007770 Cucumis sativus L. HOM05D006229 ORTHO05D007190 2.1e-139 500.4 656 49.8
THA.LOC104807215 Tarenaya hassleriana HOM05D006229 ORTHO05D007190 1.3e-138 497.7 641 49.6
MELO3C018525.2 Cucumis melo HOM05D006229 ORTHO05D007190 3.9e-138 496.1 655 49.6
Migut.B00486 Erythranthe guttata HOM05D006229 ORTHO05D007190 3.9e-138 496.1 480 60.4
AL3G46380 Arabidopsis lyrata HOM05D006229 ORTHO05D007190 5.1e-138 495.7 638 49.2
Sed0001379 Sechium edule HOM05D006229 ORTHO05D007190 1.9e-137 493.8 645 49.6
FAN24G1336 Fragaria x ananassa HOM05D006229 ORTHO05D007190 9.6e-137 491.5 707 46.7
Carub.0003s2870 Capsella rubella HOM05D006229 ORTHO05D007190 1.6e-136 490.7 641 48.8
AT2G14680 Arabidopsis thaliana HOM05D006229 ORTHO05D007190 1.1e-135 488.0 641 48.7
Thhalv10022593m.g Eutrema salsugineum HOM05D006229 ORTHO05D007190 2.2e-133 480.3 641 48.8
A07p05730 Brassica napus HOM05D006229 ORTHO05D007190 1.4e-132 477.6 669 46.5
BcaB03g16253 Brassica carinata HOM05D006229 ORTHO05D007190 7.1e-132 475.3 667 46.5
Sp3g27780 Schrenkiella parvula HOM05D006229 ORTHO05D007190 1.6e-131 474.2 639 47.4
BcaC06g36004 Brassica carinata HOM05D006229 ORTHO05D007190 3.5e-131 473.0 667 46.3
Duzib132G1226 Durio zibethinus HOM05D006229 ORTHO05D007190 3.5e-131 473.0 651 47.5
PSO675G2905 Papaver somniferum HOM05D006229 ORTHO05D007190 1.0e-130 471.5 644 45.8
unitig_46.g18839 Utricularia gibba HOM05D006229 ORTHO05D007190 3.9e-130 469.5 637 48.7
BraA07t28374Z Brassica rapa HOM05D006229 ORTHO05D007190 1.1e-129 468.0 690 45.8
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 1.5e-129 467.6 638 48.0
C07p09110 Brassica napus HOM05D006229 ORTHO05D007190 1.5e-129 467.6 669 46.2
HanXRQChr03g0073151 Helianthus annuus HOM05D006229 ORTHO05D007190 7.4e-129 465.3 626 47.9
DCAR_003607 Daucus carota HOM05D006229 ORTHO05D007190 1.6e-128 464.2 660 47.7
BolC7t41322H Brassica oleracea HOM05D006229 ORTHO05D007190 3.1e-127 459.9 692 45.5
FAN15G0250 Fragaria x ananassa HOM05D006229 ORTHO05D007190 6.9e-127 458.8 787 41.9
ClCG02G007070 Citrullus lanatus HOM05D006229 ORTHO05D007190 3.2e-124 449.9 767 42.8
PGR142G3871 Punica granatum HOM05D006229 ORTHO05D007190 1.3e-122 444.5 602 49.5
CiPaw.05G018500 Carya illinoinensis HOM05D006229 ORTHO05D007190 3.9e-122 443.0 529 51.6
Lsat_1_v5_gn_9_112861 Lactuca sativa HOM05D006229 ORTHO05D007190 1.4e-119 434.5 592 45.6
CDE01G0760 Ceratophyllum demersum HOM05D006229 ORTHO05D007190 6.5e-117 425.6 653 44.0
ATR0739G065 Amborella trichopoda HOM05D006229 ORTHO05D007190 2.3e-114 417.2 660 43.0
Eucgr.I01054 Eucalyptus grandis HOM05D006229 ORTHO05D007190 3.3e-113 413.3 510 50.0
Sabra16G0182400 Salix brachista HOM05D006229 ORTHO05D007190 1.4e-108 397.9 455 53.2
Hma1.2p1_0661F.1_g198190 Hydrangea macrophylla HOM05D006229 ORTHO05D007190 4.2e-108 396.4 423 56.7
Lj1g0023148 Lotus japonicus HOM05D006229 ORTHO05D007190 6.7e-106 389.0 454 52.4
Psat4g227440 Pisum sativum HOM05D006229 ORTHO05D007190 1.8e-103 380.9 486 49.8
Hund06515 Selenicereus undatus HOM05D006229 ORTHO05D007190 4.6e-99 366.3 680 40.3
Sc18g0007440 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.4e-97 359.0 670 40.1
HPP92_024894 Vanilla planifolia HOM05D006229 ORTHO05D007190 8.5e-93 345.5 649 38.5
AUR62030848 Chenopodium quinoa HOM05D006229 ORTHO05D007190 6.1e-91 339.3 685 37.1
EL10Ac9g22197 Beta vulgaris HOM05D006229 ORTHO05D007190 6.7e-90 335.9 668 38.2
Os03g0431800 Oryza sativa ssp. japonica HOM05D006229 ORTHO05D007190 3.7e-88 330.1 640 38.8
AUR62027009 Chenopodium quinoa HOM05D006229 ORTHO05D007190 5.0e-85 319.7 651 36.3
Ah.01g024640 Amaranthus hybridus HOM05D006229 ORTHO05D007190 4.4e-81 306.6 648 36.6
CARHR286390 Cardamine hirsuta HOM05D006229 ORTHO05D007190 5.3e-79 299.7 490 42.9
Cpa.g.sc106.40 Carica papaya HOM05D006229 ORTHO05D007190 6.5e-77 292.7 483 43.3
Gohir.A04G118200 Gossypium hirsutum HOM05D006229 ORTHO05D007190 4.7e-75 286.6 450 44.9
FAN20G1794 Fragaria x ananassa HOM05D006229 ORTHO05D007190 2.2e-72 277.7 414 46.6
SalBow6G3929 Salvia bowleyana HOM05D006229 ORTHO05D007190 2.2e-72 277.7 327 55.0
Gohir.A04G118150 Gossypium hirsutum HOM05D006229 ORTHO05D007190 9.8e-65 252.3 215 62.3
Hund00426 Selenicereus undatus HOM05D006229 ORTHO05D007190 7.8e-62 242.7 838 30.7
Zm00001eb404720 Zea mays HOM05D006229 ORTHO05D007190 2.8e-59 234.2 507 35.1
Manes.07G057925 Manihot esculenta HOM05D006229 ORTHO05D007190 8.3e-56 222.6 167 70.7
Actinidia34359 Actinidia chinensis HOM05D006229 ORTHO05D007190 9.2e-55 219.2 307 51.8
HPP92_024895 Vanilla planifolia HOM05D006229 ORTHO05D007190 5.6e-52 209.9 215 55.3
Duzib248G0077 Durio zibethinus HOM05D006229 ORTHO05D007190 5.2e-50 203.4 260 53.1
Pp3c7_18650 Physcomitrium patens HOM05D006229 ORTHO05D007190 7.0e-47 193.0 812 28.2
PGSC0003DMG402025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 3.9e-45 187.2 159 64.2
Sc18g0007400 Simmondsia chinensis HOM05D006229 ORTHO05D007190 1.9e-44 184.9 150 68.7
Mapoly0031s0064 Marchantia polymorpha HOM05D006229 ORTHO05D007190 7.5e-41 172.9 747 26.1
Aqoxy255s002 Aquilegia oxysepala HOM05D006229 ORTHO05D007190 3.6e-35 154.1 212 44.3
PGSC0003DMG403025742 Solanum tuberosum HOM05D006229 ORTHO05D007190 8.1e-35 152.9 191 51.3
arahy.Tifrunner.gnm1.ann1.DEY174 Arachis hypogaea HOM05D006229 ORTHO05D007190 1.9e-31 141.7 313 36.1
Zm00001eb065540 Zea mays HOM05D006229 ORTHO05D007190 2.7e-22 111.3 78 73.1
Oeu042676.1 Olea europaea HOM05D006229 ORTHO05D007190 2.8e-19 101.3 78 67.9
SEGI_17957 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 4.8e-19 100.5 206 33.5
CSS0042159 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.9e-18 96.7 139 48.9
CSS0023758 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 6.4e-16 90.1 100 56.0
CSS0039220 Camellia sinensis var. sinensis HOM05D006229 ORTHO05D007190 2.4e-15 88.2 88 64.8
SHI04983 Sapria himalayana HOM05D000023 ORTHO05D000014 1.6e-11 75.5 115 40.0
Migut.B00450 Erythranthe guttata HOM05D006229 ORTHO05D007190 2.4e-10 71.6 52 69.2
CAN.G474.28 Capsicum annuum HOM05D006229 ORTHO05D000001 3.1e-10 71.2 46 78.3
Sc18g0007380 Simmondsia chinensis HOM05D006229 ORTHO05D007190 7.6e-09 66.6 73 47.9
SEGI_21265 Sequoiadendron giganteum HOM05D006229 ORTHO05D007190 2.2e-08 65.1 50 74.0


User provided reference genes

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