Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 1.2e-79 299.7 144 100.0
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 2.6e-61 238.8 141 80.9
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 1.8e-59 232.6 137 77.4
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 1.7e-57 226.1 140 76.4
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 9.8e-53 210.3 141 70.2
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 2.9e-52 208.8 134 73.9
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 3.7e-52 208.4 140 71.4
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 1.4e-51 206.5 138 68.8
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 3.2e-51 205.3 137 69.3
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 1.2e-50 203.4 135 67.4
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 6.0e-50 201.1 136 66.2
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 7.8e-50 200.7 140 67.9
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.0e-49 200.3 141 64.5
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 1.0e-49 200.3 139 65.5
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 1.0e-49 200.3 140 67.9
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 1.3e-49 199.9 139 69.1
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 1.3e-49 199.9 138 65.2
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 1.7e-49 199.5 140 66.4
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 1.7e-49 199.5 139 66.2
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 2.3e-49 199.1 138 67.4
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 3.0e-49 198.7 141 66.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 3.0e-49 198.7 141 66.7
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 3.0e-49 198.7 137 67.2
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 3.9e-49 198.4 141 63.1
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.0e-49 198.0 140 65.7
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 5.0e-49 198.0 140 65.7
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 5.0e-49 198.0 141 68.8
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 6.6e-49 197.6 142 64.8
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 8.6e-49 197.2 141 63.1
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 8.6e-49 197.2 140 65.0
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 1.1e-48 196.8 142 65.5
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 1.1e-48 196.8 149 66.4
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 1.5e-48 196.4 141 63.8
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 1.5e-48 196.4 140 67.9
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 1.5e-48 196.4 141 64.5
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.5e-48 195.7 139 68.3
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 3.3e-48 195.3 135 65.9
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 3.3e-48 195.3 146 65.8
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 5.6e-48 194.5 139 66.9
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 5.6e-48 194.5 142 66.2
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 7.3e-48 194.1 138 68.1
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 7.3e-48 194.1 141 63.1
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 9.5e-48 193.7 139 67.6
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 1.2e-47 193.4 146 64.4
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 1.6e-47 193.0 146 64.4
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 1.6e-47 193.0 146 64.4
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 1.6e-47 193.0 143 65.0
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 1.6e-47 193.0 147 65.3
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 2.1e-47 192.6 140 65.0
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 2.1e-47 192.6 147 63.9
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 2.1e-47 192.6 142 63.4
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 6.2e-47 191.0 137 67.2
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 8.0e-47 190.7 138 66.7
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 8.0e-47 190.7 140 67.9
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 8.0e-47 190.7 140 62.9
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 1.1e-46 190.3 141 62.4
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.4e-46 189.9 151 62.3
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 1.4e-46 189.9 141 64.5
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 1.4e-46 189.9 141 64.5
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 1.4e-46 189.9 141 64.5
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.4e-46 189.9 139 62.6
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 2.3e-46 189.1 139 61.9
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 2.3e-46 189.1 139 61.9
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 2.3e-46 189.1 139 66.2
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 2.3e-46 189.1 140 65.0
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 3.1e-46 188.7 143 62.2
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 4.0e-46 188.3 147 63.9
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 6.8e-46 187.6 143 61.5
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 8.9e-46 187.2 144 63.9
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 1.2e-45 186.8 138 64.5
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.2e-45 186.8 135 65.2
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 1.2e-45 186.8 142 64.1
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 4.4e-45 184.9 141 63.1
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 4.4e-45 184.9 141 65.2
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 7.5e-45 184.1 147 58.5
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 9.8e-45 183.7 137 62.0
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 9.8e-45 183.7 145 62.8
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.3e-44 183.3 133 64.7
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 1.3e-44 183.3 140 60.7
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 1.7e-44 183.0 145 62.8
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 2.2e-44 182.6 131 66.4
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 2.2e-44 182.6 136 64.0
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 2.2e-44 182.6 140 63.6
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 4.9e-44 181.4 132 67.4
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 2.4e-43 179.1 132 62.9
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 1.6e-42 176.4 132 66.7
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 7.8e-42 174.1 141 59.6
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 5.0e-41 171.4 147 61.2
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 6.2e-39 164.5 137 59.9
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 2.6e-37 159.1 132 56.8
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 2.6e-37 159.1 142 60.6
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.4e-35 153.3 132 56.1
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 7.1e-35 151.0 137 51.1
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 3.5e-34 148.7 106 66.0
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 4.6e-34 148.3 135 53.3
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 1.3e-33 146.7 134 53.0
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 1.7e-33 146.4 133 54.9
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 1.2e-31 140.2 144 51.4
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 5.2e-30 134.8 141 49.6
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 5.8e-29 131.3 133 51.1
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 3.2e-27 125.6 93 61.3
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.1e-26 122.9 140 48.6
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 3.5e-26 122.1 96 62.5
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 7.8e-26 120.9 96 61.5
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 2.1e-23 112.8 95 60.0
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 4.4e-21 105.1 136 45.6
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.4e-19 100.1 102 53.9
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 5.4e-19 98.2 158 39.9
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 7.8e-18 94.4 112 46.4
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 4.0e-14 82.0 83 51.8
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 1.2e-13 80.5 154 34.4
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 2.1e-07 59.7 72 44.4


User provided reference genes

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