Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G12965 Striga asiatica HOM05D006130 ORTHO05D007491 9.3e-86 320.1 153 100.0
SGA_v2.0_scaffold47G17703 Striga asiatica HOM05D006130 ORTHO05D007491 2.7e-32 142.5 79 87.3
SGA_v2.0_scaffold58G20411 Striga asiatica HOM05D000802 ORTHO05D001074 1.6e-24 116.7 61 90.2
MSTRG.15753 Avicennia marina HOM05D006130 ORTHO05D007491 1.5e-22 110.2 79 67.1
SalBow5G2487 Salvia bowleyana HOM05D006130 ORTHO05D007491 8.9e-20 100.9 79 63.3
Prupe.6G171600 Prunus persica HOM05D006130 ORTHO05D007491 1.3e-18 97.1 80 57.5
Oeu028522.1 Olea europaea HOM05D006130 ORTHO05D007491 1.1e-17 94.0 79 53.2
vmacro18637 Vaccinium macrocarpon HOM05D006130 ORTHO05D007491 1.4e-17 93.6 81 58.0
Dinv42687 Davidia involucrata HOM05D006130 ORTHO05D007491 1.9e-17 93.2 81 58.0
Migut.L00069 Erythranthe guttata HOM05D006130 ORTHO05D007491 2.4e-17 92.8 79 60.8
CANSAT80G2857 Cannabis sativa HOM05D006130 ORTHO05D007491 4.1e-17 92.0 79 55.7
Cc07_g16320 Coffea canephora HOM05D006130 ORTHO05D007491 4.1e-17 92.0 79 59.5
Dinv19481 Davidia involucrata HOM05D006130 ORTHO05D007491 4.1e-17 92.0 81 55.6
Rhsim08G0006100 Rhododendron simsii HOM05D006130 ORTHO05D007491 5.4e-17 91.7 81 55.6
Actinidia12211 Actinidia chinensis HOM05D006130 ORTHO05D007491 9.2e-17 90.9 80 55.0
MD15G1331600 Malus domestica HOM05D006130 ORTHO05D007491 1.2e-16 90.5 81 55.6
Cfa002758 Carpinus fangiana HOM05D006130 ORTHO05D007491 1.6e-16 90.1 81 51.9
QL06p031976 Quercus lobata HOM05D006130 ORTHO05D007491 1.6e-16 90.1 81 54.3
FvH4_1g22740 Fragaria vesca HOM05D006130 ORTHO05D007491 2.7e-16 89.4 81 54.3
FAN19G1269 Fragaria x ananassa HOM05D006130 ORTHO05D007491 2.7e-16 89.4 81 54.3
FAN23G0816 Fragaria x ananassa HOM05D006130 ORTHO05D007491 2.7e-16 89.4 81 54.3
Lj2C566T4 Lonicera japonica HOM05D006130 ORTHO05D007491 2.7e-16 89.4 81 53.1
arahy.Tifrunner.gnm1.ann1.S5QZ0Z Arachis hypogaea HOM05D006130 ORTHO05D007491 7.8e-16 87.8 86 54.7
arahy.Tifrunner.gnm1.ann1.JIC903 Arachis hypogaea HOM05D006130 ORTHO05D007491 1.0e-15 87.4 86 53.5
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-15 87.0 79 53.2
ECA238G3253 Erigeron canadensis HOM05D006130 ORTHO05D007491 1.3e-15 87.0 79 53.2
Ca_16897_v3 Cicer arietinum L. HOM05D006130 ORTHO05D007491 2.3e-15 86.3 80 51.2
Ciclev10026167m.g Citrus clementina HOM05D006130 ORTHO05D007491 2.3e-15 86.3 81 54.3
MELO3C025043.2 Cucumis melo HOM05D006130 ORTHO05D007491 2.3e-15 86.3 81 51.9
Haze_25050 Corylus avellana HOM05D006130 ORTHO05D007491 3.0e-15 85.9 81 51.9
FAN26G2148 Fragaria x ananassa HOM05D006130 ORTHO05D007491 3.9e-15 85.5 81 51.9
TAR628G0645 Trochodendron aralioides HOM05D006130 ORTHO05D007491 3.9e-15 85.5 79 54.4
Actinidia35264 Actinidia chinensis HOM05D006130 ORTHO05D007491 5.1e-15 85.1 81 49.4
Atru.chr4.339 Acer truncatum HOM05D006130 ORTHO05D007491 8.6e-15 84.3 79 50.6
CiPaw.04G091300 Carya illinoinensis HOM05D006130 ORTHO05D007491 8.6e-15 84.3 81 48.1
Aqoxy7G04042 Aquilegia oxysepala HOM05D006130 ORTHO05D007491 1.1e-14 84.0 79 54.4
EL10Ac6g14758 Beta vulgaris HOM05D006130 ORTHO05D007491 1.1e-14 84.0 83 51.8
AUR62016283 Chenopodium quinoa HOM05D006130 ORTHO05D007491 1.1e-14 84.0 91 49.5
TPR.G23729 Trifolium pratense HOM05D006130 ORTHO05D007491 1.1e-14 84.0 80 50.0
ClCG11G005560 Citrullus lanatus HOM05D006130 ORTHO05D007491 1.5e-14 83.6 79 50.6
Medtr3g095020 Medicago truncatula HOM05D006130 ORTHO05D007491 1.5e-14 83.6 80 50.0
Thecc.01G113900 Theobroma cacao HOM05D006130 ORTHO05D007491 1.5e-14 83.6 81 54.3
Aa31LG1G17100 Aethionema arabicum HOM05D006130 ORTHO05D007491 1.9e-14 83.2 80 55.0
Psat5g066000 Pisum sativum HOM05D006130 ORTHO05D007491 1.9e-14 83.2 81 51.9
RcHm_v2.0_Chr2g0117041 Rosa chinensis HOM05D006130 ORTHO05D007491 1.9e-14 83.2 82 56.1
THA.LOC104818474 Tarenaya hassleriana HOM05D006130 ORTHO05D007491 2.5e-14 82.8 93 49.5
PGR102G0730 Punica granatum HOM05D006130 ORTHO05D007491 3.3e-14 82.4 111 47.7
Duzib264G0573 Durio zibethinus HOM05D006130 ORTHO05D007491 4.3e-14 82.0 81 53.1
Sp2g27910 Schrenkiella parvula HOM05D006130 ORTHO05D007491 4.3e-14 82.0 80 51.2
Sed0017229 Sechium edule HOM05D006130 ORTHO05D007491 4.3e-14 82.0 81 51.9
CARHR278840 Cardamine hirsuta HOM05D006130 ORTHO05D007491 5.6e-14 81.6 80 52.5
Cpa.g.sc191.11 Carica papaya HOM05D006130 ORTHO05D007491 5.6e-14 81.6 79 50.6
CsaV3_6G002440 Cucumis sativus L. HOM05D006130 ORTHO05D007491 5.6e-14 81.6 81 49.4
Carub.0008s2566 Capsella rubella HOM05D006130 ORTHO05D007491 7.3e-14 81.3 80 52.5
AT5G64830 Arabidopsis thaliana HOM05D006130 ORTHO05D007491 9.5e-14 80.9 81 53.1
Thhalv10004393m.g Eutrema salsugineum HOM05D006130 ORTHO05D007491 9.5e-14 80.9 80 51.2
Gorai.007G244700 Gossypium raimondii HOM05D006130 ORTHO05D007491 9.5e-14 80.9 81 51.9
HanXRQChr14g0445741 Helianthus annuus HOM05D006130 ORTHO05D007491 9.5e-14 80.9 79 50.6
Nn5g28889 Nelumbo nucifera HOM05D006130 ORTHO05D007491 9.5e-14 80.9 81 54.3
Sopen04g023130 Solanum pennellii HOM05D006130 ORTHO05D007491 1.2e-13 80.5 79 51.9
AL8G42310 Arabidopsis lyrata HOM05D006130 ORTHO05D007491 1.6e-13 80.1 80 52.5
MBI05_g29098_MAGBIO Magnolia biondii HOM05D006130 ORTHO05D007491 1.6e-13 80.1 81 54.3
Nitab4.5_0015691g0010 Nicotiana tabacum HOM05D006130 ORTHO05D007491 1.6e-13 80.1 81 55.6
TWI74G0604 Tripterygium wilfordii HOM05D006130 ORTHO05D007491 2.1e-13 79.7 83 50.6
BcaC01g02716 Brassica carinata HOM05D006130 ORTHO05D007491 2.8e-13 79.3 81 51.9
A06p31630 Brassica napus HOM05D006130 ORTHO05D007491 2.8e-13 79.3 81 51.9
C03p61330 Brassica napus HOM05D006130 ORTHO05D007491 2.8e-13 79.3 81 51.9
BolC3t18393H Brassica oleracea HOM05D006130 ORTHO05D007491 2.8e-13 79.3 81 51.9
Eucgr.H04843 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.8e-13 79.3 79 51.9
Phvul.009G139000 Phaseolus vulgaris HOM05D006130 ORTHO05D007491 2.8e-13 79.3 80 51.2
BraA06t26099Z Brassica rapa HOM05D006130 ORTHO05D007491 4.7e-13 78.6 81 51.9
Glyma.06G147000 Glycine max HOM05D006130 ORTHO05D007491 4.7e-13 78.6 85 48.2
Gohir.A11G197900 Gossypium hirsutum HOM05D006130 ORTHO05D007491 4.7e-13 78.6 81 50.6
Lj1g0022742 Lotus japonicus HOM05D006130 ORTHO05D007491 4.7e-13 78.6 80 48.8
Hund03536 Selenicereus undatus HOM05D006130 ORTHO05D007491 4.7e-13 78.6 79 49.4
CAN.G347.1 Capsicum annuum HOM05D006130 ORTHO05D007491 6.2e-13 78.2 84 48.8
DCAR_001374 Daucus carota HOM05D006130 ORTHO05D007491 6.2e-13 78.2 79 51.9
Nitab4.5_0004840g0040 Nicotiana tabacum HOM05D006130 ORTHO05D007491 6.2e-13 78.2 81 54.3
VMungo1309G1738 Vigna mungo HOM05D006130 ORTHO05D007491 6.2e-13 78.2 80 51.2
BcaB02g09834 Brassica carinata HOM05D006130 ORTHO05D007491 8.1e-13 77.8 81 50.6
Glyma.04G218800 Glycine max HOM05D006130 ORTHO05D007491 8.1e-13 77.8 82 48.8
Gohir.D11G231600 Gossypium hirsutum HOM05D006130 ORTHO05D007491 8.1e-13 77.8 81 50.6
Sc03g0004370 Simmondsia chinensis HOM05D006130 ORTHO05D007491 8.1e-13 77.8 80 51.2
unitig_62.g23431 Utricularia gibba HOM05D006130 ORTHO05D007491 8.1e-13 77.8 81 49.4
Duzib147G1554 Durio zibethinus HOM05D006130 ORTHO05D007491 1.1e-12 77.4 79 50.6
PGSC0003DMG400031208 Solanum tuberosum HOM05D006130 ORTHO05D007491 1.1e-12 77.4 79 50.6
Lalb_Chr11g0068091 Lupinus albus HOM05D006130 ORTHO05D007491 1.4e-12 77.0 80 48.8
Manes.12G143200 Manihot esculenta HOM05D006130 ORTHO05D007491 1.4e-12 77.0 80 52.5
Peaxi162Scf00106g00208 Petunia axillaris HOM05D006130 ORTHO05D007491 1.4e-12 77.0 79 51.9
Solyc04g051780.3 Solanum lycopersicum HOM05D006130 ORTHO05D007491 1.4e-12 77.0 79 49.4
Eucgr.H04852 Eucalyptus grandis HOM05D006130 ORTHO05D007491 2.3e-12 76.3 79 50.6
Eucgr.H04861 Eucalyptus grandis HOM05D006130 ORTHO05D007491 5.2e-12 75.1 78 51.3
Hma1.2p1_0375F.1_g138770 Hydrangea macrophylla HOM05D006130 ORTHO05D007491 5.2e-12 75.1 79 51.9
Sabra07G0067600 Salix brachista HOM05D006130 ORTHO05D007491 5.2e-12 75.1 82 48.8
COL.COLO4_11003 Corchorus olitorius HOM05D006130 ORTHO05D007491 6.8e-12 74.7 79 49.4
HPP92_016462 Vanilla planifolia HOM05D006130 ORTHO05D007491 1.2e-11 73.9 80 51.2
HPP92_027147 Vanilla planifolia HOM05D006130 ORTHO05D007491 1.2e-11 73.9 80 51.2
PSO170G1695 Papaver somniferum HOM05D006130 ORTHO05D007491 1.5e-11 73.6 79 46.8
Ah.03g141370 Amaranthus hybridus HOM05D006130 ORTHO05D007491 2.0e-11 73.2 85 49.4
GSVIVG01022236001 Vitis vinifera HOM05D006130 ORTHO05D007491 2.6e-11 72.8 79 48.1
PSO210G3121 Papaver somniferum HOM05D006130 ORTHO05D007491 7.6e-11 71.2 79 48.1
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 9.9e-11 70.9 113 35.4
Lsat_1_v5_gn_2_67140 Lactuca sativa HOM05D006130 ORTHO05D007491 1.3e-10 70.5 113 35.4
AUR62003302 Chenopodium quinoa HOM05D006130 ORTHO05D007491 2.2e-10 69.7 72 52.8
Potri.007G080500 Populus trichocarpa HOM05D006130 ORTHO05D007491 4.9e-10 68.6 83 47.0
Zm00001eb431860 Zea mays HOM05D006130 ORTHO05D007491 1.1e-09 67.4 79 41.8
Os04g0640800 Oryza sativa ssp. japonica HOM05D006130 ORTHO05D007491 1.4e-09 67.0 79 40.5
CDE09G1360 Ceratophyllum demersum HOM05D006130 ORTHO05D007491 1.9e-09 66.6 79 44.3
SMO358G0378 Selaginella moellendorffii HOM05D006130 ORTHO05D007491 7.1e-09 64.7 84 42.9
ATR0665G503 Amborella trichopoda HOM05D006130 ORTHO05D007491 1.6e-08 63.5 81 40.7
SEGI_25559 Sequoiadendron giganteum HOM05D006130 ORTHO05D007491 3.5e-08 62.4 80 41.2
Eucgr.H04859 Eucalyptus grandis HOM05D006130 ORTHO05D007491 6.0e-08 61.6 69 49.3
Eucgr.H04846 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.0e-07 60.8 64 50.0
Eucgr.H04856 Eucalyptus grandis HOM05D006130 ORTHO05D007491 1.0e-07 60.8 64 50.0
Mapoly0014s0114 Marchantia polymorpha HOM05D006130 ORTHO05D007491 1.3e-07 60.5 89 39.3
CBR_g30690 Chara braunii HOM05D006130 ORTHO05D007491 1.7e-07 60.1 130 36.9
Ah.14g080600 Amaranthus hybridus HOM05D006130 ORTHO05D007491 5.1e-07 58.5 70 47.1
Pp3c16_16240 Physcomitrium patens HOM05D006130 ORTHO05D007491 5.1e-07 58.5 86 39.5
CDE05G2499 Ceratophyllum demersum HOM05D000802 ORTHO05D001074 4.3e-06 55.5 51 51.0
CDE05G3593 Ceratophyllum demersum HOM05D000802 ORTHO05D001074 5.6e-06 55.1 51 51.0
DCAR_022775 Daucus carota HOM05D000802 ORTHO05D001074 5.6e-06 55.1 71 40.8
SHI05719 Sapria himalayana HOM05D000802 ORTHO05D001074 7.3e-06 54.7 54 48.1


User provided reference genes

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