Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold32G12947 Striga asiatica HOM05D004672 ORTHO05D005732 4.3e-53 211.1 108 100.0
Oeu042393.4 Olea europaea HOM05D004672 ORTHO05D005732 2.8e-12 75.5 90 47.8
MSTRG.16633 Avicennia marina HOM05D004672 ORTHO05D005732 1.1e-11 73.6 76 51.3
CSS0013617 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 4.1e-11 71.6 76 51.3
Migut.B00522 Erythranthe guttata HOM05D004672 ORTHO05D005732 4.1e-11 71.6 76 56.6
Dinv16032 Davidia involucrata HOM05D004672 ORTHO05D005732 2.6e-10 68.9 76 50.0
Cpa.g.sc20.40 Carica papaya HOM05D004672 ORTHO05D005732 3.5e-10 68.6 76 48.7
Oeu033795.2 Olea europaea HOM05D004672 ORTHO05D005732 4.5e-10 68.2 90 45.6
Lj9C342T12 Lonicera japonica HOM05D004672 ORTHO05D005732 5.9e-10 67.8 76 51.3
Manes.10G094200 Manihot esculenta HOM05D004672 ORTHO05D005732 1.3e-09 66.6 76 50.0
Potri.009G079900 Populus trichocarpa HOM05D004672 ORTHO05D005732 1.3e-09 66.6 84 46.4
Actinidia00323 Actinidia chinensis HOM05D004672 ORTHO05D005732 2.2e-09 65.9 76 47.4
Actinidia02411 Actinidia chinensis HOM05D004672 ORTHO05D005732 2.2e-09 65.9 76 47.4
Dinv08967 Davidia involucrata HOM05D004672 ORTHO05D005732 5.0e-09 64.7 102 42.2
QL11p026607 Quercus lobata HOM05D004672 ORTHO05D005732 5.0e-09 64.7 76 48.7
CSS0000676 Camellia sinensis var. sinensis HOM05D004672 ORTHO05D005732 1.1e-08 63.5 76 46.1
DCAR_021895 Daucus carota HOM05D004672 ORTHO05D005732 1.1e-08 63.5 75 48.0
Sabra09G0061900 Salix brachista HOM05D004672 ORTHO05D005732 2.5e-08 62.4 84 45.2
THA.LOC104818461 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 3.2e-08 62.0 76 42.1
CiPaw.06G160900 Carya illinoinensis HOM05D004672 ORTHO05D005732 4.2e-08 61.6 76 47.4
Cc02_g20590 Coffea canephora HOM05D004672 ORTHO05D005732 4.2e-08 61.6 76 47.4
Nitab4.5_0002335g0010 Nicotiana tabacum HOM05D004672 ORTHO05D005732 5.5e-08 61.2 95 43.2
SalBow6G5524 Salvia bowleyana HOM05D004672 ORTHO05D005732 5.5e-08 61.2 103 40.8
Ciclev10027696m.g Citrus clementina HOM05D004672 ORTHO05D005732 7.2e-08 60.8 76 46.1
THA.LOC104799703 Tarenaya hassleriana HOM05D004672 ORTHO05D005732 7.2e-08 60.8 78 41.0
arahy.Tifrunner.gnm1.ann1.BVLY6P Arachis hypogaea HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 44.7
arahy.Tifrunner.gnm1.ann1.GE1IDC Arachis hypogaea HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 44.7
Thhalv10003522m.g Eutrema salsugineum HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 47.4
FvH4_2g11160 Fragaria vesca HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 43.4
FAN20G2876 Fragaria x ananassa HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 43.4
FAN24G1132 Fragaria x ananassa HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 43.4
FAN27G2619 Fragaria x ananassa HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 43.4
MD10G1056900 Malus domestica HOM05D004672 ORTHO05D005732 1.2e-07 60.1 76 46.1
ECA240G2418 Erigeron canadensis HOM05D004672 ORTHO05D005732 1.6e-07 59.7 76 46.1
Haze_10395 Corylus avellana HOM05D004672 ORTHO05D005732 2.1e-07 59.3 76 47.4
FAN15G2368 Fragaria x ananassa HOM05D004672 ORTHO05D005732 2.1e-07 59.3 76 46.1
Prupe.8G075100 Prunus persica HOM05D004672 ORTHO05D005732 2.1e-07 59.3 76 47.4
Nitab4.5_0005163g0020 Nicotiana tabacum HOM05D004672 ORTHO05D005732 2.7e-07 58.9 95 42.1
CAN.G504.43 Capsicum annuum HOM05D004672 ORTHO05D005732 3.6e-07 58.5 70 51.4
MD05G1049800 Malus domestica HOM05D004672 ORTHO05D005732 4.7e-07 58.2 76 42.1
SGA_v2.0_scaffold83G26394 Striga asiatica HOM05D004672 ORTHO05D005732 6.1e-07 57.8 40 65.0
Cfa004803 Carpinus fangiana HOM05D004672 ORTHO05D005732 8.0e-07 57.4 76 44.7
Glyma.15G060100 Glycine max HOM05D004672 ORTHO05D005732 8.0e-07 57.4 76 46.1
Medtr2g010110 Medicago truncatula HOM05D004672 ORTHO05D005732 8.0e-07 57.4 76 47.4
RcHm_v2.0_Chr6g0269481 Rosa chinensis HOM05D004672 ORTHO05D005732 8.0e-07 57.4 76 42.1
AL8G41790 Arabidopsis lyrata HOM05D004672 ORTHO05D005732 1.4e-06 56.6 92 42.4
Hma1.2p1_0908F.1_g235670 Hydrangea macrophylla HOM05D004672 ORTHO05D005732 1.4e-06 56.6 66 48.5
unitig_744.g24197 Utricularia gibba HOM05D004672 ORTHO05D005732 1.4e-06 56.6 65 52.3
VMungo0540G1852 Vigna mungo HOM05D004672 ORTHO05D005732 1.4e-06 56.6 73 46.6
Carub.0008s2522 Capsella rubella HOM05D004672 ORTHO05D005732 1.8e-06 56.2 92 42.4
vmacro19391 Vaccinium macrocarpon HOM05D004672 ORTHO05D005732 1.8e-06 56.2 66 50.0
Sc06g0005830 Simmondsia chinensis HOM05D004672 ORTHO05D005732 2.3e-06 55.8 92 38.0
Phvul.006G199700 Phaseolus vulgaris HOM05D004672 ORTHO05D005732 4.0e-06 55.1 66 48.5
Psat1g212840 Pisum sativum HOM05D004672 ORTHO05D005732 4.0e-06 55.1 76 44.7
EL10Ac9g22127 Beta vulgaris HOM05D004672 ORTHO05D005732 5.2e-06 54.7 97 39.2
Peaxi162Scf00016g03462 Petunia axillaris HOM05D004672 ORTHO05D005732 5.2e-06 54.7 76 43.4
TAR628G0793 Trochodendron aralioides HOM05D004672 ORTHO05D005732 5.2e-06 54.7 87 34.5
AUR62027080 Chenopodium quinoa HOM05D004672 ORTHO05D005732 6.7e-06 54.3 99 39.4
Sp2g27510 Schrenkiella parvula HOM05D004672 ORTHO05D005732 6.7e-06 54.3 92 39.1
GSVIVG01038520001 Vitis vinifera HOM05D004672 ORTHO05D005732 6.7e-06 54.3 66 50.0
Glyma.13G254600 Glycine max HOM05D004672 ORTHO05D005732 8.8e-06 53.9 66 45.5


User provided reference genes

Program Settings