Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold329G48876 Striga asiatica HOM05D008372 ORTHO05D010559 2.4e-190 668.7 337 100.0
Dinv34822 Davidia involucrata HOM05D008372 ORTHO05D010559 4.2e-115 418.7 331 61.0
Nitab4.5_0004398g0020 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.2e-114 417.2 285 69.8
PGSC0003DMG400024192 Solanum tuberosum HOM05D008372 ORTHO05D010559 4.0e-113 412.1 285 69.1
Sopen02g014250 Solanum pennellii HOM05D008372 ORTHO05D010559 8.3e-111 404.4 283 67.8
COL.COLO4_09329 Corchorus olitorius HOM05D008372 ORTHO05D010559 9.2e-110 401.0 286 67.1
CAN.G225.5 Capsicum annuum HOM05D008372 ORTHO05D010559 2.7e-109 399.4 284 67.6
Thecc.04G133800 Theobroma cacao HOM05D008372 ORTHO05D010559 2.7e-109 399.4 286 66.1
CSS0004693 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 4.6e-109 398.7 286 66.1
CSS0035068 Camellia sinensis var. sinensis HOM05D008372 ORTHO05D010559 7.8e-109 397.9 286 66.1
GSVIVG01031022001 Vitis vinifera HOM05D008372 ORTHO05D010559 1.3e-108 397.1 286 64.7
QL02p051398 Quercus lobata HOM05D008372 ORTHO05D010559 2.3e-108 396.4 289 64.0
Actinidia36321 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.9e-108 396.0 286 65.4
Prupe.8G147100 Prunus persica HOM05D008372 ORTHO05D010559 1.1e-107 394.0 286 65.0
Ciclev10013657m.g Citrus clementina HOM05D008372 ORTHO05D010559 2.1e-106 389.8 285 64.2
CANSAT78G1639 Cannabis sativa HOM05D008372 ORTHO05D010559 6.2e-106 388.3 285 64.2
Rhsim10G0067200 Rhododendron simsii HOM05D008372 ORTHO05D010559 1.0e-105 387.5 286 64.0
Cpa.g.sc282.9 Carica papaya HOM05D008372 ORTHO05D010559 4.4e-104 382.1 266 68.8
PSO384G0617 Papaver somniferum HOM05D008372 ORTHO05D010559 5.8e-104 381.7 327 57.5
Gohir.A07G173100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 7.5e-104 381.3 286 64.3
Gorai.001G202000 Gossypium raimondii HOM05D008372 ORTHO05D010559 7.5e-104 381.3 286 64.0
Aqoxy3G00272 Aquilegia oxysepala HOM05D008372 ORTHO05D010559 1.3e-103 380.6 317 61.5
Gohir.D07G181100 Gossypium hirsutum HOM05D008372 ORTHO05D010559 1.3e-103 380.6 286 63.6
PSO339G4146 Papaver somniferum HOM05D008372 ORTHO05D010559 9.2e-102 374.4 290 60.3
TAR629G0699 Trochodendron aralioides HOM05D008372 ORTHO05D010559 6.2e-98 361.7 285 63.2
Haze_14152 Corylus avellana HOM05D008372 ORTHO05D010559 1.6e-93 347.1 314 55.7
Atru.chr1.1698 Acer truncatum HOM05D008372 ORTHO05D010559 1.1e-91 340.9 250 62.8
Nitab4.5_0001217g0010 Nicotiana tabacum HOM05D008372 ORTHO05D010559 1.2e-88 330.9 268 61.9
Nn4g23872 Nelumbo nucifera HOM05D008372 ORTHO05D010559 9.9e-88 327.8 262 61.5
Pp3c9_18240 Physcomitrium patens HOM05D008372 ORTHO05D010559 1.7e-87 327.0 289 55.4
PGR004G0240 Punica granatum HOM05D008372 ORTHO05D010559 3.7e-87 325.9 312 55.1
AagrBONN_evm.TU.Sc2ySwM_117.1277 Anthoceros agrestis HOM05D008372 ORTHO05D010559 1.9e-86 323.6 296 53.7
CANSAT78G1437 Cannabis sativa HOM05D008372 ORTHO05D010559 1.2e-85 320.9 241 64.3
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.2e-85 320.9 242 64.5
Mapoly0081s0037 Marchantia polymorpha HOM05D008372 ORTHO05D010559 5.6e-83 312.0 291 52.9
SMO356G0307 Selaginella moellendorffii HOM05D008372 ORTHO05D010559 8.1e-82 308.1 294 51.4
HPP92_024422 Vanilla planifolia HOM05D008372 ORTHO05D010559 1.4e-81 307.4 338 51.5
CBR_g23242 Chara braunii HOM05D008372 ORTHO05D010559 1.6e-77 293.9 290 51.7
Nn8g38834 Nelumbo nucifera HOM05D008372 ORTHO05D010559 6.0e-69 265.4 225 60.0
Nn1g03461 Nelumbo nucifera HOM05D008372 ORTHO05D010559 5.3e-65 252.3 214 57.9
Migut.L00318 Erythranthe guttata HOM05D008372 ORTHO05D010559 8.4e-63 245.0 143 78.3
PRCOL_00000444 Prasinoderma coloniale HOM05D008372 ORTHO05D010559 9.3e-54 214.9 254 44.5
Solyc02g063190.2 Solanum lycopersicum HOM05D008372 ORTHO05D010559 4.8e-50 202.6 123 74.0
Peaxi162Scf00501g00319 Petunia axillaris HOM05D008372 ORTHO05D010559 3.8e-47 193.0 139 67.6
SEGI_35369 Sequoiadendron giganteum HOM05D008372 ORTHO05D010559 5.5e-46 189.1 164 58.5
Solyc02g063180.4 Solanum lycopersicum HOM05D008372 ORTHO05D010559 1.6e-45 187.6 139 66.2
Cc07_g08820 Coffea canephora HOM05D008372 ORTHO05D010559 3.9e-44 183.0 143 59.4
Peaxi162Scf00501g00324 Petunia axillaris HOM05D008372 ORTHO05D010559 1.9e-43 180.6 124 69.4
Oeu008425.1 Olea europaea HOM05D008372 ORTHO05D010559 4.2e-38 162.9 148 56.1
Nn1g03560 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.8e-33 147.5 206 43.7
Nn4g22381 Nelumbo nucifera HOM05D008372 ORTHO05D010559 2.4e-33 147.1 137 54.0
Nn7g36676 Nelumbo nucifera HOM05D008372 ORTHO05D010559 1.1e-30 138.3 131 53.4
Actinidia15884 Actinidia chinensis HOM05D008372 ORTHO05D010559 2.0e-27 127.5 106 56.6
Potri.004G099466 Populus trichocarpa HOM05D008372 ORTHO05D010559 6.3e-26 122.5 94 64.9
RcHm_v2.0_Chr6g0252551 Rosa chinensis HOM05D008372 ORTHO05D010559 3.1e-25 120.2 82 64.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 5.5e-14 82.8 119 40.3
FAN15G2669 Fragaria x ananassa HOM05D008372 ORTHO05D010559 8.5e-07 58.9 75 42.7


User provided reference genes

Program Settings