Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold329G48866 Striga asiatica HOM05D002536 ORTHO05D006290 9.7e-228 793.1 395 100.0
Migut.L00470 Erythranthe guttata HOM05D002536 ORTHO05D006290 1.4e-165 586.6 394 75.1
Oeu047421.1 Olea europaea HOM05D002536 ORTHO05D006290 3.5e-161 572.0 392 71.7
Actinidia15923 Actinidia chinensis HOM05D002536 ORTHO05D006290 1.3e-158 563.5 391 70.3
Cc07_g08220 Coffea canephora HOM05D002536 ORTHO05D006290 3.6e-158 562.0 404 68.8
CAN.G625.81 Capsicum annuum HOM05D002536 ORTHO05D006290 2.7e-153 545.8 393 69.0
PGSC0003DMG400030643 Solanum tuberosum HOM05D002536 ORTHO05D006290 3.0e-152 542.3 390 68.5
Ciclev10011939m.g Citrus clementina HOM05D002536 ORTHO05D006290 5.1e-152 541.6 393 67.9
COL.COLO4_15704 Corchorus olitorius HOM05D002536 ORTHO05D006290 1.9e-151 539.7 393 67.9
Sopen02g035950 Solanum pennellii HOM05D002536 ORTHO05D006290 1.9e-151 539.7 393 67.7
GSVIVG01030877001 Vitis vinifera HOM05D002536 ORTHO05D006290 2.1e-150 536.2 391 69.6
Gohir.A08G052800 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.4e-149 533.5 391 68.3
TAR371G0457 Trochodendron aralioides HOM05D002536 ORTHO05D006290 1.8e-149 533.1 392 67.9
Dinv19005 Davidia involucrata HOM05D002536 ORTHO05D006290 2.4e-149 532.7 390 67.9
Gorai.004G064600 Gossypium raimondii HOM05D002536 ORTHO05D006290 2.4e-149 532.7 391 68.0
Rhsim10G0079100 Rhododendron simsii HOM05D002536 ORTHO05D006290 3.1e-149 532.3 390 68.2
Gohir.D08G062400 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.6e-148 529.3 391 67.3
Atru.chr4.1673 Acer truncatum HOM05D002536 ORTHO05D006290 4.5e-148 528.5 393 66.7
Prupe.3G158200 Prunus persica HOM05D002536 ORTHO05D006290 7.6e-148 527.7 395 66.6
Manes.01G115300 Manihot esculenta HOM05D002536 ORTHO05D006290 1.3e-147 526.9 393 65.9
CiPaw.04G045800 Carya illinoinensis HOM05D002536 ORTHO05D006290 1.7e-147 526.6 392 65.8
Nitab4.5_0004399g0050 Nicotiana tabacum HOM05D002536 ORTHO05D006290 3.2e-146 522.3 408 65.0
MD09G1261000 Malus domestica HOM05D002536 ORTHO05D006290 5.5e-146 521.5 395 65.6
Cfa007855 Carpinus fangiana HOM05D002536 ORTHO05D006290 2.7e-145 519.2 423 62.2
Ah.10g037990 Amaranthus hybridus HOM05D002536 ORTHO05D006290 4.6e-145 518.5 391 63.9
Thecc.04G122200 Theobroma cacao HOM05D002536 ORTHO05D006290 6.0e-145 518.1 391 65.7
Eucgr.F02817 Eucalyptus grandis HOM05D002536 ORTHO05D006290 1.0e-144 517.3 391 63.9
Duzib211G0581 Durio zibethinus HOM05D002536 ORTHO05D006290 1.3e-144 516.9 391 66.2
HanXRQChr11g0325221 Helianthus annuus HOM05D002536 ORTHO05D006290 1.3e-144 516.9 390 66.7
LjContig00141g0005291 Lotus japonicus HOM05D002536 ORTHO05D006290 2.3e-144 516.2 393 65.4
RcHm_v2.0_Chr3g0492101 Rosa chinensis HOM05D002536 ORTHO05D006290 2.3e-144 516.2 392 66.8
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 6.7e-144 514.6 388 65.5
PGR004G1192 Punica granatum HOM05D002536 ORTHO05D006290 1.5e-143 513.5 391 64.2
Hund13689 Selenicereus undatus HOM05D002536 ORTHO05D006290 5.6e-143 511.5 393 64.6
AL2G23020 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 1.6e-142 510.0 397 63.0
Aqoxy3G04016 Aquilegia oxysepala HOM05D002536 ORTHO05D006290 2.1e-142 509.6 390 64.4
BraA07t30972Z Brassica rapa HOM05D002536 ORTHO05D006290 2.1e-142 509.6 399 64.9
FvH4_1g30040 Fragaria vesca HOM05D002536 ORTHO05D006290 2.1e-142 509.6 391 65.7
Glyma.02G247400 Glycine max HOM05D002536 ORTHO05D006290 3.7e-142 508.8 391 65.5
BcaB03g15263 Brassica carinata HOM05D002536 ORTHO05D006290 4.8e-142 508.4 399 64.2
Lsat_1_v5_gn_4_154740 Lactuca sativa HOM05D002536 ORTHO05D006290 1.8e-141 506.5 390 64.9
A07p33460 Brassica napus HOM05D002536 ORTHO05D006290 2.4e-141 506.1 399 64.2
Medtr5g079770 Medicago truncatula HOM05D002536 ORTHO05D006290 2.4e-141 506.1 391 63.2
ECA232G3521 Erigeron canadensis HOM05D002536 ORTHO05D006290 5.3e-141 505.0 392 64.8
CANSAT78G2192 Cannabis sativa HOM05D002536 ORTHO05D006290 6.9e-141 504.6 391 64.2
Thhalv10018669m.g Eutrema salsugineum HOM05D002536 ORTHO05D006290 6.9e-141 504.6 398 64.1
BcaC08g46049 Brassica carinata HOM05D002536 ORTHO05D006290 9.0e-141 504.2 399 64.2
THA.LOC104805600 Tarenaya hassleriana HOM05D002536 ORTHO05D006290 9.0e-141 504.2 394 62.9
Nitab4.5_0002248g0030 Nicotiana tabacum HOM05D002536 ORTHO05D006290 1.2e-140 503.8 393 64.1
BolC6t39073H Brassica oleracea HOM05D002536 ORTHO05D006290 2.0e-140 503.1 399 64.4
Psat2g045240 Pisum sativum HOM05D002536 ORTHO05D006290 2.0e-140 503.1 391 63.4
Carub.0002s1253 Capsella rubella HOM05D002536 ORTHO05D006290 7.6e-140 501.1 398 63.1
QL11p004402 Quercus lobata HOM05D002536 ORTHO05D006290 7.6e-140 501.1 448 58.0
AT1G66510 Arabidopsis thaliana HOM05D002536 ORTHO05D006290 1.3e-139 500.4 397 62.0
Sed0021694 Sechium edule HOM05D002536 ORTHO05D006290 1.7e-139 500.0 394 61.9
VMungo0647G1217 Vigna mungo HOM05D002536 ORTHO05D006290 2.2e-139 499.6 396 63.6
Phvul.008G233500 Phaseolus vulgaris HOM05D002536 ORTHO05D006290 2.9e-139 499.2 391 63.7
arahy.Tifrunner.gnm1.ann1.3WSI1D Arachis hypogaea HOM05D002536 ORTHO05D006290 4.9e-139 498.4 417 61.9
arahy.Tifrunner.gnm1.ann1.DT5JRU Arachis hypogaea HOM05D002536 ORTHO05D006290 8.4e-139 497.7 416 62.0
Sp5g21560 Schrenkiella parvula HOM05D002536 ORTHO05D006290 8.4e-139 497.7 397 63.0
CARHR058490 Cardamine hirsuta HOM05D002536 ORTHO05D006290 3.2e-138 495.7 392 63.0
EL10Ac2g04489 Beta vulgaris HOM05D002536 ORTHO05D006290 5.5e-138 495.0 386 62.7
C06p39850 Brassica napus HOM05D002536 ORTHO05D006290 9.3e-138 494.2 399 63.7
TWI74G1499 Tripterygium wilfordii HOM05D002536 ORTHO05D006290 9.3e-138 494.2 391 62.4
CsaV3_1G043810 Cucumis sativus L. HOM05D002536 ORTHO05D006290 1.6e-137 493.4 394 61.7
DCAR_022460 Daucus carota HOM05D002536 ORTHO05D006290 4.6e-137 491.9 385 62.1
FAN28G1150 Fragaria x ananassa HOM05D002536 ORTHO05D006290 6.7e-136 488.0 426 60.1
FAN19G0538 Fragaria x ananassa HOM05D002536 ORTHO05D006290 1.1e-135 487.3 426 60.3
Ca_05868_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 1.6e-134 483.4 396 61.1
MELO3C020300.2 Cucumis melo HOM05D002536 ORTHO05D006290 3.7e-134 482.3 394 60.7
Lalb_Chr04g0251281 Lupinus albus HOM05D002536 ORTHO05D006290 1.4e-133 480.3 391 61.1
Aa31LG2G3150 Aethionema arabicum HOM05D002536 ORTHO05D006290 1.8e-133 479.9 397 61.7
PSO017G6098 Papaver somniferum HOM05D002536 ORTHO05D006290 1.8e-133 479.9 391 61.4
Nn3g18196 Nelumbo nucifera HOM05D002536 ORTHO05D006290 6.9e-133 478.0 380 64.5
vmacro05501 Vaccinium macrocarpon HOM05D002536 ORTHO05D006290 7.6e-132 474.6 502 52.2
Sabra17G0102100 Salix brachista HOM05D002536 ORTHO05D006290 1.0e-131 474.2 394 61.2
Potri.017G123900 Populus trichocarpa HOM05D002536 ORTHO05D006290 9.4e-130 467.6 367 63.2
Sabra17G0104800 Salix brachista HOM05D002536 ORTHO05D006290 4.6e-129 465.3 468 53.8
Glyma.14G068800 Glycine max HOM05D002536 ORTHO05D006290 3.9e-128 462.2 359 64.9
Lj4A178G42 Lonicera japonica HOM05D002536 ORTHO05D006290 9.1e-125 451.1 442 54.8
Os04g0132300 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D006290 2.0e-124 449.9 390 58.5
Sc11g0008590 Simmondsia chinensis HOM05D002536 ORTHO05D006290 1.1e-122 444.1 330 66.1
Lalb_Chr04g0249391 Lupinus albus HOM05D002536 ORTHO05D006290 1.3e-118 430.6 359 60.2
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 2.8e-118 429.5 448 54.0
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 3.1e-117 426.0 397 56.9
CDE04G0829 Ceratophyllum demersum HOM05D002536 ORTHO05D006290 1.7e-115 420.2 389 56.8
AUR62023246 Chenopodium quinoa HOM05D002536 ORTHO05D006290 6.5e-115 418.3 390 55.4
SalBow7G0143 Salvia bowleyana HOM05D002536 ORTHO05D006290 1.9e-114 416.8 330 64.5
Zm00001eb088880 Zea mays HOM05D002536 ORTHO05D006290 1.1e-111 407.5 351 59.8
unitig_32.g11881 Utricularia gibba HOM05D002536 ORTHO05D006290 1.5e-111 407.1 396 55.1
Solyc02g091330.4 Solanum lycopersicum HOM05D002536 ORTHO05D006290 2.6e-111 406.4 283 69.6
Peaxi162Scf00803g00527 Petunia axillaris HOM05D002536 ORTHO05D006290 1.6e-105 387.1 272 70.2
AUR62023197 Chenopodium quinoa HOM05D002536 ORTHO05D006290 2.4e-101 373.2 390 51.3
FAN28G0504 Fragaria x ananassa HOM05D002536 ORTHO05D006290 8.5e-99 364.8 294 65.0
AagrBONN_evm.TU.Sc2ySwM_344.4243 Anthoceros agrestis HOM05D002536 ORTHO05D006290 6.1e-97 358.6 399 47.6
Pp3c15_1450 Physcomitrium patens HOM05D002536 ORTHO05D006290 6.3e-94 348.6 408 45.3
MSTRG.3529 Avicennia marina HOM05D002536 ORTHO05D006290 3.8e-91 339.3 237 71.7
SMO196G0007 Selaginella moellendorffii HOM05D002536 ORTHO05D006290 1.3e-83 314.3 393 45.3
ATR0686G028 Amborella trichopoda HOM05D002536 ORTHO05D006290 9.5e-82 308.1 285 53.3
Ca_05898_v3 Cicer arietinum L. HOM05D002536 ORTHO05D006290 2.8e-81 306.6 250 62.0
TPR.G3505 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-80 303.5 228 65.4
CBR_g28641 Chara braunii HOM05D002536 ORTHO05D006290 7.8e-76 288.5 480 37.1
Cpa.g.sc116.21 Carica papaya HOM05D002536 ORTHO05D006290 8.9e-72 275.0 220 62.7
AagrBONN_evm.TU.Sc2ySwM_368.3391 Anthoceros agrestis HOM05D002536 ORTHO05D006290 5.8e-71 272.3 372 41.1
QL11p004257 Quercus lobata HOM05D002536 ORTHO05D006290 4.9e-62 242.7 193 63.7
Mapoly0209s0005 Marchantia polymorpha HOM05D002536 ORTHO05D006290 1.9e-58 230.7 317 40.1
Cpa.g.sc116.20 Carica papaya HOM05D002536 ORTHO05D006290 1.2e-47 194.9 144 64.6
Cre05.g244750 Chlamydomonas reinhardtii HOM05D002536 ORTHO05D006290 9.9e-39 165.2 528 25.4
QL11p004418 Quercus lobata HOM05D002536 ORTHO05D006290 4.9e-38 162.9 130 63.8
QL11p004025 Quercus lobata HOM05D002536 ORTHO05D006290 5.6e-34 149.4 113 62.8
TPR.G39323 Trifolium pratense HOM05D002536 ORTHO05D006290 3.9e-27 126.7 80 72.5
Gohir.A09G155300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.1e-26 125.2 119 53.8
Gohir.A07G193350 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-26 124.8 119 54.6
Gohir.A08G229450 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-26 124.8 119 54.6
Gohir.A12G000900 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.5e-26 124.8 119 54.6
Gohir.D02G177580 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.6e-26 122.9 119 53.8
Gohir.A10G143300 Gossypium hirsutum HOM05D002536 ORTHO05D006290 7.4e-26 122.5 119 53.8
TPR.G18743 Trifolium pratense HOM05D002536 ORTHO05D006290 1.3e-25 121.7 170 44.1
Gorai.004G103000 Gossypium raimondii HOM05D002536 ORTHO05D006290 8.2e-25 119.0 107 57.0
Gohir.D04G118901 Gossypium hirsutum HOM05D002536 ORTHO05D006290 1.4e-24 118.2 85 65.9
VMungo0464G1199 Vigna mungo HOM05D002536 ORTHO05D006290 1.4e-24 118.2 79 68.4
TPR.G3492 Trifolium pratense HOM05D002536 ORTHO05D006290 5.3e-24 116.3 95 58.9
Gohir.D02G126132 Gossypium hirsutum HOM05D002536 ORTHO05D006290 9.0e-24 115.5 91 60.4
QL11p004209 Quercus lobata HOM05D002536 ORTHO05D006290 3.4e-23 113.6 113 52.2
PRCOL_00001496 Prasinoderma coloniale HOM05D002536 ORTHO05D006290 5.8e-23 112.8 322 28.0
TPR.G3477 Trifolium pratense HOM05D002536 ORTHO05D006290 2.1e-20 104.4 185 39.5
Gorai.010G146900 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.5e-20 103.6 81 61.7
TPR.G4379 Trifolium pratense HOM05D002536 ORTHO05D006290 2.3e-19 100.9 113 49.6
Gohir.D06G126066 Gossypium hirsutum HOM05D002536 ORTHO05D006290 5.1e-19 99.8 71 66.2
FAN28G2473 Fragaria x ananassa HOM05D002536 ORTHO05D006290 3.3e-18 97.1 60 76.7
SEGI_34356 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 3.3e-18 97.1 69 62.3
Gohir.D03G005233 Gossypium hirsutum HOM05D002536 ORTHO05D006290 3.1e-16 90.5 62 67.7
Gorai.007G247100 Gossypium raimondii HOM05D002536 ORTHO05D006290 3.1e-16 90.5 62 67.7
Gorai.012G115800 Gossypium raimondii HOM05D002536 ORTHO05D006290 9.0e-16 89.0 62 66.1
TPR.G15212 Trifolium pratense HOM05D002536 ORTHO05D006290 3.4e-15 87.0 71 57.7
Gorai.003G061900 Gossypium raimondii HOM05D002536 ORTHO05D006290 8.5e-14 82.4 62 64.5
Gohir.D10G126550 Gossypium hirsutum HOM05D002536 ORTHO05D006290 2.5e-13 80.9 62 61.3
TPR.G3463 Trifolium pratense HOM05D002536 ORTHO05D006290 3.2e-13 80.5 129 39.5
TPR.G22657 Trifolium pratense HOM05D002536 ORTHO05D006290 5.5e-13 79.7 54 70.4
TPR.G5666 Trifolium pratense HOM05D002536 ORTHO05D006290 3.6e-12 77.0 67 59.7
Gohir.D11G077800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.2e-09 67.8 91 44.0
AL2G24330 Arabidopsis lyrata HOM05D002536 ORTHO05D006290 3.1e-08 63.9 34 85.3
SEGI_27826 Sequoiadendron giganteum HOM05D002536 ORTHO05D006290 5.9e-07 59.7 65 40.0


User provided reference genes

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