Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold329G48860 Striga asiatica HOM05D008294 ORTHO05D010468 1.7e-73 279.3 142 100.0
MSTRG.3520 Avicennia marina HOM05D008294 ORTHO05D010468 2.2e-36 156.0 150 60.0
Migut.L00469 Erythranthe guttata HOM05D008294 ORTHO05D010468 1.5e-32 143.3 154 56.5
Cc07_g08180 Coffea canephora HOM05D008294 ORTHO05D010468 6.1e-31 137.9 135 59.3
SalBow7G4521 Salvia bowleyana HOM05D008294 ORTHO05D010468 1.2e-29 133.7 149 57.7
Oeu054753.1 Olea europaea HOM05D008294 ORTHO05D010468 3.8e-25 118.6 111 58.6
Peaxi162Scf00118g00016 Petunia axillaris HOM05D008294 ORTHO05D010468 2.1e-23 112.8 126 50.8
GSVIVG01030864001 Vitis vinifera HOM05D008294 ORTHO05D010468 4.0e-22 108.6 143 46.2
ClCG05G010930 Citrullus lanatus HOM05D008294 ORTHO05D010468 5.2e-22 108.2 143 46.9
HanXRQChr14g0439951 Helianthus annuus HOM05D008294 ORTHO05D010468 2.6e-21 105.9 129 47.3
Thecc.04G121200 Theobroma cacao HOM05D008294 ORTHO05D010468 9.8e-21 104.0 133 44.4
EL10Ac2g04485 Beta vulgaris HOM05D008294 ORTHO05D010468 2.2e-20 102.8 161 42.9
DCAR_025875 Daucus carota HOM05D008294 ORTHO05D010468 2.8e-20 102.4 135 44.4
Lsat_1_v5_gn_2_81341 Lactuca sativa HOM05D008294 ORTHO05D010468 1.1e-19 100.5 129 47.3
Nitab4.5_0002366g0040 Nicotiana tabacum HOM05D008294 ORTHO05D010468 4.1e-19 98.6 104 52.9
Potri.017G128700 Populus trichocarpa HOM05D008294 ORTHO05D010468 4.1e-19 98.6 149 43.0
Potri.004G088300 Populus trichocarpa HOM05D008294 ORTHO05D010468 5.4e-19 98.2 125 44.8
MELO3C020292.2 Cucumis melo HOM05D008294 ORTHO05D010468 7.0e-19 97.8 144 41.7
CsaV3_3G021650 Cucumis sativus L. HOM05D008294 ORTHO05D010468 1.2e-18 97.1 153 41.8
Solyc02g091380.1 Solanum lycopersicum HOM05D008294 ORTHO05D010468 1.2e-18 97.1 106 50.9
Atru.chr13.2285 Acer truncatum HOM05D008294 ORTHO05D010468 1.6e-18 96.7 123 42.3
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 2.0e-18 96.3 119 48.7
TAR017G0001 Trochodendron aralioides HOM05D008294 ORTHO05D010468 2.0e-18 96.3 147 42.2
Sabra17G0107200 Salix brachista HOM05D008294 ORTHO05D010468 3.5e-18 95.5 147 41.5
Sopen02g036000 Solanum pennellii HOM05D008294 ORTHO05D010468 3.5e-18 95.5 106 50.0
ECA238G3741 Erigeron canadensis HOM05D008294 ORTHO05D010468 4.5e-18 95.1 109 54.1
Lalb_Chr04g0251301 Lupinus albus HOM05D008294 ORTHO05D010468 7.7e-18 94.4 145 37.9
PGSC0003DMG400030645 Solanum tuberosum HOM05D008294 ORTHO05D010468 1.0e-17 94.0 104 48.1
Lalb_Chr17g0346181 Lupinus albus HOM05D008294 ORTHO05D010468 1.7e-17 93.2 143 38.5
Sed0009315 Sechium edule HOM05D008294 ORTHO05D010468 1.7e-17 93.2 138 43.5
Nitab4.5_0004399g0030 Nicotiana tabacum HOM05D008294 ORTHO05D010468 2.9e-17 92.4 111 47.7
Ciclev10013091m.g Citrus clementina HOM05D008294 ORTHO05D010468 5.0e-17 91.7 151 39.7
Nitab4.5_0002248g0070 Nicotiana tabacum HOM05D008294 ORTHO05D010468 5.0e-17 91.7 108 49.1
QL11p004113 Quercus lobata HOM05D008294 ORTHO05D010468 6.5e-17 91.3 105 46.7
Nn3g18213 Nelumbo nucifera HOM05D008294 ORTHO05D010468 2.5e-16 89.4 135 40.7
AUR62023240 Chenopodium quinoa HOM05D008294 ORTHO05D010468 3.3e-16 89.0 158 42.4
Eucgr.F02821 Eucalyptus grandis HOM05D008294 ORTHO05D010468 7.2e-16 87.8 99 47.5
Manes.01G115600 Manihot esculenta HOM05D008294 ORTHO05D010468 1.2e-15 87.0 115 45.2
Sopen03g007510 Solanum pennellii HOM05D008294 ORTHO05D010468 3.6e-15 85.5 103 44.7
Gorai.008G058300 Gossypium raimondii HOM05D008294 ORTHO05D010468 4.7e-15 85.1 120 45.8
Lj1g0007014 Lotus japonicus HOM05D008294 ORTHO05D010468 1.4e-14 83.6 132 39.4
PGSC0003DMG400016702 Solanum tuberosum HOM05D008294 ORTHO05D010468 1.4e-14 83.6 103 42.7
Migut.H00270 Erythranthe guttata HOM05D008294 ORTHO05D010468 2.3e-14 82.8 75 56.0
Glyma.02G246900 Glycine max HOM05D008294 ORTHO05D010468 2.3e-14 82.8 142 38.7
Glyma.14G069300 Glycine max HOM05D008294 ORTHO05D010468 6.8e-14 81.3 142 38.0
VMungo0647G1342 Vigna mungo HOM05D008294 ORTHO05D010468 6.8e-14 81.3 110 43.6
arahy.Tifrunner.gnm1.ann1.HG0CBG Arachis hypogaea HOM05D008294 ORTHO05D010468 2.0e-13 79.7 136 36.0
arahy.Tifrunner.gnm1.ann1.RHD4AQ Arachis hypogaea HOM05D008294 ORTHO05D010468 2.0e-13 79.7 136 36.0
Cpa.g.sc604.2 Carica papaya HOM05D008294 ORTHO05D010468 2.0e-13 79.7 91 46.2
Phvul.008G234000 Phaseolus vulgaris HOM05D008294 ORTHO05D010468 5.7e-13 78.2 123 38.2
Prupe.3G159000 Prunus persica HOM05D008294 ORTHO05D010468 1.7e-12 76.6 67 55.2
Sc10g0000850 Simmondsia chinensis HOM05D008294 ORTHO05D010468 2.2e-12 76.3 112 42.0
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.8e-12 75.9 70 54.3
Gohir.D12G055400 Gossypium hirsutum HOM05D008294 ORTHO05D010468 3.8e-09 65.5 110 40.9
Medtr5g079600 Medicago truncatula HOM05D008294 ORTHO05D010468 3.8e-09 65.5 106 35.8
Zm00001eb334540 Zea mays HOM05D008294 ORTHO05D010468 8.6e-09 64.3 71 46.5
Ah.16g101330 Amaranthus hybridus HOM05D008294 ORTHO05D010468 1.1e-08 63.9 76 44.7
Nitab4.5_0000410g0140 Nicotiana tabacum HOM05D002803 ORTHO05D003089 1.9e-08 63.2 87 41.4
Nitab4.5_0003716g0110 Nicotiana tabacum HOM05D002803 ORTHO05D003089 3.3e-08 62.4 87 41.4
CiPaw.15G125800 Carya illinoinensis HOM05D002803 ORTHO05D003089 4.3e-08 62.0 96 36.5
Peaxi162Scf00015g00069 Petunia axillaris HOM05D002803 ORTHO05D003089 5.6e-08 61.6 92 38.0
TPR.G3487 Trifolium pratense HOM05D008294 ORTHO05D010468 5.6e-08 61.6 54 53.7
PGSC0003DMG400005702 Solanum tuberosum HOM05D002803 ORTHO05D003089 7.3e-08 61.2 87 40.2
Manes.01G021300 Manihot esculenta HOM05D002803 ORTHO05D003089 1.6e-07 60.1 131 32.1
Sopen03g038670 Solanum pennellii HOM05D002803 ORTHO05D003089 2.8e-07 59.3 87 37.9
Manes.05G118500 Manihot esculenta HOM05D002803 ORTHO05D003089 3.6e-07 58.9 97 35.1
Atru.chr9.745 Acer truncatum HOM05D002803 ORTHO05D003089 4.7e-07 58.5 75 38.7
Cpa.g.sc13.62 Carica papaya HOM05D002803 ORTHO05D003089 4.7e-07 58.5 75 38.7
Nn3g17698 Nelumbo nucifera HOM05D002803 ORTHO05D003089 4.7e-07 58.5 112 33.0
Cfa019832 Carpinus fangiana HOM05D002803 ORTHO05D003089 6.1e-07 58.2 93 38.7
Dinv05804 Davidia involucrata HOM05D002803 ORTHO05D003089 6.1e-07 58.2 119 33.6
Duzib205G0759 Durio zibethinus HOM05D002803 ORTHO05D003089 6.1e-07 58.2 121 35.5
Potri.012G059500 Populus trichocarpa HOM05D002803 ORTHO05D003089 6.1e-07 58.2 146 31.5
Sed0021519 Sechium edule HOM05D002803 ORTHO05D003089 6.1e-07 58.2 112 33.9
TAR374G0994 Trochodendron aralioides HOM05D002803 ORTHO05D003089 6.1e-07 58.2 85 35.3
EL10Ac5g11244 Beta vulgaris HOM05D002803 ORTHO05D003089 8.0e-07 57.8 45 48.9
TPR.G9796 Trifolium pratense HOM05D002803 ORTHO05D003089 8.0e-07 57.8 39 56.4
Lsat_1_v5_gn_1_15881 Lactuca sativa HOM05D002803 ORTHO05D003089 1.0e-06 57.4 113 31.9
DCAR_011342 Daucus carota HOM05D002803 ORTHO05D003089 1.4e-06 57.0 39 53.8
DCAR_015130 Daucus carota HOM05D002803 ORTHO05D003089 1.4e-06 57.0 41 56.1
SEGI_13625 Sequoiadendron giganteum HOM05D002803 ORTHO05D003089 1.4e-06 57.0 73 41.1
SEGI_32988 Sequoiadendron giganteum HOM05D002803 ORTHO05D003089 1.4e-06 57.0 73 41.1
Thecc.03G027600 Theobroma cacao HOM05D002803 ORTHO05D003089 1.4e-06 57.0 75 36.0
TPR.G9792 Trifolium pratense HOM05D002803 ORTHO05D003089 1.4e-06 57.0 39 53.8
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 1.8e-06 56.6 116 32.8
Gohir.A11G007400 Gossypium hirsutum HOM05D002803 ORTHO05D003089 1.8e-06 56.6 80 38.8
Gohir.D11G006500 Gossypium hirsutum HOM05D002803 ORTHO05D003089 1.8e-06 56.6 80 38.8
Haze_18600 Corylus avellana HOM05D002803 ORTHO05D003089 2.3e-06 56.2 92 38.0
DCAR_023180 Daucus carota HOM05D002803 ORTHO05D003089 2.3e-06 56.2 84 39.3
Duzib084G1194 Durio zibethinus HOM05D002803 ORTHO05D003089 2.3e-06 56.2 79 36.7
Lalb_Chr07g0178561 Lupinus albus HOM05D002803 ORTHO05D003089 2.3e-06 56.2 121 32.2
Psat1g024640 Pisum sativum HOM05D002803 ORTHO05D003089 3.0e-06 55.8 84 33.3
Solyc03g119810.1 Solanum lycopersicum HOM05D002803 ORTHO05D003089 3.0e-06 55.8 87 36.8
TAR622G0697 Trochodendron aralioides HOM05D002803 ORTHO05D003089 3.0e-06 55.8 140 32.9
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 4.0e-06 55.5 121 36.4
Gorai.007G007800 Gossypium raimondii HOM05D002803 ORTHO05D003089 4.0e-06 55.5 80 37.5
HanXRQChr02g0042761 Helianthus annuus HOM05D002803 ORTHO05D003089 4.0e-06 55.5 38 57.9
MD14G1221200 Malus domestica HOM05D002803 ORTHO05D003089 4.0e-06 55.5 116 29.3
Sabra12G0042700 Salix brachista HOM05D002803 ORTHO05D003089 4.0e-06 55.5 97 37.1
AUR62032184 Chenopodium quinoa HOM05D002803 ORTHO05D003089 5.2e-06 55.1 45 46.7
PGR102G2995 Punica granatum HOM05D002803 ORTHO05D003089 5.2e-06 55.1 132 29.5
Sed0002511 Sechium edule HOM05D002803 ORTHO05D003089 5.2e-06 55.1 79 30.4
SEGI_10730 Sequoiadendron giganteum HOM05D002803 ORTHO05D003089 5.2e-06 55.1 134 32.1
AUR62036944 Chenopodium quinoa HOM05D002803 ORTHO05D003089 6.8e-06 54.7 55 43.6
Medtr1g093840 Medicago truncatula HOM05D002803 ORTHO05D003089 6.8e-06 54.7 40 50.0
Phvul.009G200800 Phaseolus vulgaris HOM05D002803 ORTHO05D003089 6.8e-06 54.7 116 34.5
Actinidia39806 Actinidia chinensis HOM05D002803 ORTHO05D003089 8.9e-06 54.3 50 42.0
CSS0037901 Camellia sinensis var. sinensis HOM05D002803 ORTHO05D003089 8.9e-06 54.3 113 32.7
Lalb_Chr02g0151801 Lupinus albus HOM05D002803 ORTHO05D003089 8.9e-06 54.3 83 34.9
SEGI_15898 Sequoiadendron giganteum HOM05D002803 ORTHO05D003089 8.9e-06 54.3 73 39.7
Solyc06g069250.2 Solanum lycopersicum HOM05D002803 ORTHO05D003089 8.9e-06 54.3 75 38.7


User provided reference genes

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