Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 2.8e-191 671.8 341 100.0
Migut.F02055 Erythranthe guttata HOM05D004244 ORTHO05D004964 4.4e-51 206.1 278 47.8
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.4e-49 200.3 277 47.7
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 2.2e-47 193.7 281 45.6
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 1.6e-40 171.0 270 42.2
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 2.3e-31 140.6 268 39.2
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 2.3e-31 140.6 239 41.4
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 6.6e-31 139.0 276 38.8
SalBow1G6706 Salvia bowleyana HOM05D004244 ORTHO05D004964 5.2e-28 129.4 205 42.9
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 1.2e-27 128.3 273 36.6
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 2.2e-26 124.0 268 36.2
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 8.3e-26 122.1 277 37.2
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 8.3e-26 122.1 271 36.2
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 3.2e-25 120.2 272 36.8
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 3.2e-25 120.2 264 34.5
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 4.1e-25 119.8 273 37.4
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 2.7e-24 117.1 277 37.5
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 3.5e-24 116.7 208 35.6
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 2.1e-21 107.5 306 32.4
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 4.7e-21 106.3 210 36.2
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 4.7e-21 106.3 186 38.2
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 1.4e-20 104.8 276 34.4
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 1.8e-20 104.4 268 32.5
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 2.3e-20 104.0 215 34.0
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 2.3e-20 104.0 210 35.2
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 3.1e-20 103.6 210 35.2
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 3.1e-20 103.6 248 35.5
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 1.2e-19 101.7 267 31.5
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 1.2e-19 101.7 255 32.5
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.5e-19 101.3 196 36.7
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 1.5e-19 101.3 267 31.5
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 3.4e-19 100.1 272 33.5
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 4.4e-19 99.8 264 31.4
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 4.4e-19 99.8 229 34.1
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 4.4e-19 99.8 229 34.1
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 4.4e-19 99.8 284 29.6
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 4.4e-19 99.8 251 37.8
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 9.9e-19 98.6 172 39.0
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 2.2e-18 97.4 264 33.3
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 2.2e-18 97.4 205 33.7
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 2.9e-18 97.1 284 29.9
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 2.9e-18 97.1 265 30.9
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 3.7e-18 96.7 246 33.3
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 4.9e-18 96.3 215 32.6
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 6.4e-18 95.9 169 39.6
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 6.4e-18 95.9 211 32.7
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 8.3e-18 95.5 170 38.8
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.1e-17 95.1 235 28.9
COL.COLO4_15535 Corchorus olitorius HOM05D004244 ORTHO05D004964 2.4e-17 94.0 182 38.5
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 4.1e-17 93.2 204 35.3
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 4.1e-17 93.2 288 30.9
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 1.2e-16 91.7 260 30.0
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 1.2e-16 91.7 162 42.0
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 1.6e-16 91.3 197 32.5
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 2.1e-16 90.9 265 30.9
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 2.7e-16 90.5 225 33.3
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 3.5e-16 90.1 270 28.9
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 3.5e-16 90.1 277 29.2
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 4.6e-16 89.7 264 30.7
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.6e-16 89.7 259 31.7
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 7.8e-16 89.0 279 31.2
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 7.8e-16 89.0 269 29.7
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 7.8e-16 89.0 210 33.8
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.0e-15 88.6 276 29.0
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.3e-15 88.2 270 28.1
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 1.3e-15 88.2 257 29.2
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 2.3e-15 87.4 166 35.5
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 3.0e-15 87.0 239 34.3
Hund07175 Selenicereus undatus HOM05D004244 ORTHO05D004964 6.6e-15 85.9 267 31.5
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 1.5e-14 84.7 167 34.7
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 2.5e-14 84.0 201 30.8
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 4.3e-14 83.2 276 29.3
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 5.6e-14 82.8 165 33.9
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 5.6e-14 82.8 252 32.1
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 9.5e-14 82.0 228 31.1
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.2e-13 81.6 175 34.9
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 1.2e-13 81.6 259 28.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 1.6e-13 81.3 171 34.5
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 1.6e-13 81.3 204 35.3
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 1.4e-12 78.2 198 29.8
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.8e-12 77.8 223 30.0
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 4.0e-12 76.6 293 28.0
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 4.0e-12 76.6 191 32.5
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 4.0e-12 76.6 226 30.5
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 1.2e-11 75.1 190 30.0
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 1.5e-11 74.7 274 29.9
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 1.5e-11 74.7 280 31.1
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 2.0e-11 74.3 241 30.3
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 5.8e-11 72.8 229 33.6
AUR62006986 Chenopodium quinoa HOM05D004244 ORTHO05D004964 7.6e-11 72.4 156 37.2
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 9.9e-11 72.0 204 32.4
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 3.2e-09 67.0 265 27.2
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 4.1e-09 66.6 217 30.4
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.1e-09 66.6 211 29.4
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 4.1e-09 66.6 211 29.4
Sc19g0005660 Simmondsia chinensis HOM05D004244 ORTHO05D004964 4.1e-09 66.6 274 27.4
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 5.4e-09 66.2 204 30.4
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.6e-08 64.7 145 35.2
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.1e-08 64.3 205 30.2
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 2.7e-08 63.9 171 33.3
AUR62000633 Chenopodium quinoa HOM05D004244 ORTHO05D004964 3.5e-08 63.5 160 33.8
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 3.5e-08 63.5 170 30.6
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 3.5e-08 63.5 219 27.4
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 6.0e-08 62.8 175 30.3
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 7.8e-08 62.4 187 29.9
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 1.0e-07 62.0 204 27.9
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 1.3e-07 61.6 145 34.5
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 2.3e-07 60.8 217 29.0
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 6.6e-07 59.3 202 30.7
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 8.6e-07 58.9 214 27.6
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 1.9e-06 57.8 201 28.9
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 1.9e-06 57.8 217 27.6
DCAR_030773 Daucus carota HOM05D004244 ORTHO05D004964 2.5e-06 57.4 152 32.2
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 4.3e-06 56.6 149 30.9
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 7.3e-06 55.8 211 25.1


User provided reference genes

Program Settings