Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold328G48815 Striga asiatica HOM05D001749 ORTHO05D001632 2.4e-112 409.1 236 100.0
MSTRG.25190 Avicennia marina HOM05D001749 ORTHO05D001632 4.2e-45 185.7 252 48.0
Migut.C00753 Erythranthe guttata HOM05D001749 ORTHO05D001632 2.7e-44 183.0 256 47.3
SalBow8G3194 Salvia bowleyana HOM05D001749 ORTHO05D001632 1.3e-33 147.5 241 44.0
SalBow8G4985 Salvia bowleyana HOM05D001749 ORTHO05D001632 1.3e-33 147.5 241 44.0
SGA_v2.0_scaffold201G41384 Striga asiatica HOM05D001749 ORTHO05D001632 6.4e-33 145.2 239 41.0
Oeu030425.2 Olea europaea HOM05D001749 ORTHO05D001632 2.0e-31 140.2 263 38.0
MSTRG.24281 Avicennia marina HOM05D001749 ORTHO05D001632 1.0e-30 137.9 231 43.3
Oeu063612.1 Olea europaea HOM05D001749 ORTHO05D001632 2.5e-29 133.3 240 40.4
Peaxi162Scf00140g00031 Petunia axillaris HOM05D001749 ORTHO05D001632 3.3e-29 132.9 246 37.8
Lj4C36T10 Lonicera japonica HOM05D001749 ORTHO05D001632 3.6e-28 129.4 236 39.4
Sopen04g034230 Solanum pennellii HOM05D001749 ORTHO05D001632 6.2e-28 128.6 236 38.1
Cc10_g02570 Coffea canephora HOM05D001749 ORTHO05D001632 1.4e-27 127.5 247 38.5
Solyc04g080640.1 Solanum lycopersicum HOM05D001749 ORTHO05D001632 1.8e-27 127.1 236 37.7
SGA_v2.0_scaffold11G05819 Striga asiatica HOM05D001749 ORTHO05D001632 6.8e-27 125.2 231 41.1
PGSC0003DMG400003697 Solanum tuberosum HOM05D001749 ORTHO05D001632 2.0e-26 123.6 236 38.1
CAN.G1226.48 Capsicum annuum HOM05D001749 ORTHO05D001632 2.2e-25 120.2 230 36.5
Nitab4.5_0003265g0050 Nicotiana tabacum HOM05D001749 ORTHO05D001632 3.7e-25 119.4 248 37.5
CSS0005210 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.9e-24 117.1 227 35.7
Nitab4.5_0009228g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.9e-24 117.1 239 38.9
Dinv36112 Davidia involucrata HOM05D003425 ORTHO05D003897 1.7e-22 110.5 241 36.5
Dinv39444 Davidia involucrata HOM05D001749 ORTHO05D001632 2.8e-20 103.2 234 33.8
Nitab4.5_0000746g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 8.1e-20 101.7 231 32.9
HanXRQChr09g0268971 Helianthus annuus HOM05D001749 ORTHO05D001632 1.8e-19 100.5 270 35.6
Lsat_1_v5_gn_4_117861 Lactuca sativa HOM05D001749 ORTHO05D001632 1.8e-19 100.5 251 33.9
Peaxi162Scf00303g00092 Petunia axillaris HOM05D001749 ORTHO05D001632 1.8e-19 100.5 236 34.7
unitig_578.g16076 Utricularia gibba HOM05D001749 ORTHO05D001632 3.1e-19 99.8 221 33.0
HanXRQChr16g0501491 Helianthus annuus HOM05D001749 ORTHO05D001632 8.9e-19 98.2 225 37.8
DCAR_022466 Daucus carota HOM05D001749 ORTHO05D001632 1.2e-18 97.8 234 36.8
Hma1.2p1_0469F.1_g159000 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 4.4e-18 95.9 226 35.0
HanXRQChr13g0395401 Helianthus annuus HOM05D001749 ORTHO05D001632 3.7e-17 92.8 232 32.8
HanXRQChr04g0103991 Helianthus annuus HOM05D001749 ORTHO05D001632 4.9e-17 92.4 225 32.4
unitig_8.g4930 Utricularia gibba HOM05D001749 ORTHO05D001632 1.2e-15 87.8 220 30.5
Lsat_1_v5_gn_5_27281 Lactuca sativa HOM05D001749 ORTHO05D001632 2.1e-15 87.0 233 33.0
ECA232G3131 Erigeron canadensis HOM05D001749 ORTHO05D001632 6.0e-15 85.5 263 31.6
TAR381G0807 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.9e-14 82.8 226 33.2
DCAR_013834 Daucus carota HOM05D001749 ORTHO05D001632 1.1e-13 81.3 232 33.2
Rhsim06G0030100 Rhododendron simsii HOM05D001749 ORTHO05D001632 1.9e-13 80.5 236 31.8
Sc15g0007080 Simmondsia chinensis HOM05D001749 ORTHO05D001632 3.3e-13 79.7 219 33.8
Actinidia22524 Actinidia chinensis HOM05D001749 ORTHO05D001632 1.2e-12 77.8 210 30.0
Rhsim08G0119900 Rhododendron simsii HOM05D001749 ORTHO05D001632 2.1e-12 77.0 229 32.3
CSS0042795 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 1.4e-11 74.3 221 32.1
TAR628G1444 Trochodendron aralioides HOM05D001749 ORTHO05D001632 3.1e-11 73.2 225 29.3
CSS0035839 Camellia sinensis var. sinensis HOM05D001749 ORTHO05D001632 4.0e-11 72.8 224 29.9
Hma1.2p1_0224F.1_g094445 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 5.2e-11 72.4 220 30.5
Hma1.2p1_2993F.1_g331370 Hydrangea macrophylla HOM05D001749 ORTHO05D001632 5.2e-11 72.4 220 30.5
Sc02g0005800 Simmondsia chinensis HOM05D001749 ORTHO05D001632 2.0e-10 70.5 232 30.6
FAN28G1045 Fragaria x ananassa HOM05D001749 ORTHO05D001632 2.6e-10 70.1 243 30.0
DCAR_025960 Daucus carota HOM05D001749 ORTHO05D001632 4.4e-10 69.3 240 25.8
FAN23G0952 Fragaria x ananassa HOM05D001749 ORTHO05D001632 5.8e-10 68.9 243 29.6
FAN19G1879 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.3e-09 67.8 244 29.5
Nitab4.5_0019909g0010 Nicotiana tabacum HOM05D001749 ORTHO05D001632 1.3e-09 67.8 222 29.3
FAN26G1634 Fragaria x ananassa HOM05D001749 ORTHO05D001632 3.7e-09 66.2 243 29.2
FvH4_1g12780 Fragaria vesca HOM05D001749 ORTHO05D001632 4.9e-09 65.9 244 29.1
Nn5g29676 Nelumbo nucifera HOM05D001749 ORTHO05D001632 6.4e-09 65.5 232 27.6
Aqoxy6G01165 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 1.4e-08 64.3 238 28.6
QL06p047145 Quercus lobata HOM05D001749 ORTHO05D001632 1.4e-08 64.3 218 30.7
Nn1g04912 Nelumbo nucifera HOM05D001749 ORTHO05D001632 2.4e-08 63.5 236 27.5
MD05G1064000 Malus domestica HOM05D001749 ORTHO05D001632 4.1e-08 62.8 218 26.6
Prupe.8G094100 Prunus persica HOM05D001749 ORTHO05D001632 7.1e-08 62.0 221 29.0
Gohir.A11G182600 Gossypium hirsutum HOM05D001749 ORTHO05D001632 9.2e-08 61.6 232 27.6
QL11p044367 Quercus lobata HOM05D001749 ORTHO05D001632 1.2e-07 61.2 213 28.6
Actinidia19200 Actinidia chinensis HOM05D001749 ORTHO05D001632 1.6e-07 60.8 213 28.6
CiPaw.01G045700 Carya illinoinensis HOM05D001749 ORTHO05D001632 1.6e-07 60.8 216 28.2
Duzib147G1275 Durio zibethinus HOM05D001749 ORTHO05D001632 1.6e-07 60.8 239 24.7
Gorai.008G066400 Gossypium raimondii HOM05D001749 ORTHO05D001632 1.6e-07 60.8 233 30.0
MD10G1072700 Malus domestica HOM05D001749 ORTHO05D001632 1.6e-07 60.8 218 27.1
Manes.11G085200 Manihot esculenta HOM05D001749 ORTHO05D001632 1.6e-07 60.8 235 26.8
TAR625G0803 Trochodendron aralioides HOM05D001749 ORTHO05D001632 1.6e-07 60.8 234 27.4
RcHm_v2.0_Chr2g0100901 Rosa chinensis HOM05D001749 ORTHO05D001632 2.1e-07 60.5 245 28.2
CARHR281310 Cardamine hirsuta HOM05D001749 ORTHO05D001632 2.7e-07 60.1 245 25.3
Gohir.D12G063200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 3.5e-07 59.7 233 29.6
Potri.004G157300 Populus trichocarpa HOM05D001749 ORTHO05D001632 3.5e-07 59.7 238 27.7
Gohir.D11G189200 Gossypium hirsutum HOM05D001749 ORTHO05D001632 4.6e-07 59.3 241 27.0
Carub.0008s2808 Capsella rubella HOM05D001749 ORTHO05D001632 6.0e-07 58.9 228 27.6
Dinv40015 Davidia involucrata HOM05D001749 ORTHO05D001632 6.0e-07 58.9 225 25.3
Gorai.007G201500 Gossypium raimondii HOM05D001749 ORTHO05D001632 6.0e-07 58.9 241 27.0
Haze_15059 Corylus avellana HOM05D001749 ORTHO05D001632 7.8e-07 58.5 219 26.9
Cfa004342 Carpinus fangiana HOM05D001749 ORTHO05D001632 1.0e-06 58.2 240 27.5
FvH4_2g09200 Fragaria vesca HOM05D001749 ORTHO05D001632 1.0e-06 58.2 220 26.8
FAN15G1825 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.0e-06 58.2 220 26.8
FAN24G3069 Fragaria x ananassa HOM05D001749 ORTHO05D001632 1.0e-06 58.2 220 26.8
MBI16_g30353_MAGBIO Magnolia biondii HOM05D001749 ORTHO05D001632 1.7e-06 57.4 228 25.9
MD02G1143400 Malus domestica HOM05D001749 ORTHO05D001632 2.3e-06 57.0 228 28.5
Aqoxy5G01581 Aquilegia oxysepala HOM05D001749 ORTHO05D001632 3.9e-06 56.2 251 26.7
ClCG11G004240 Citrullus lanatus HOM05D001749 ORTHO05D001632 3.9e-06 56.2 233 27.0
Atru.chr5.3055 Acer truncatum HOM05D001749 ORTHO05D001632 5.1e-06 55.8 233 25.8
AUR62014496 Chenopodium quinoa HOM05D001749 ORTHO05D001632 5.1e-06 55.8 223 28.3
Gorai.011G100900 Gossypium raimondii HOM05D001749 ORTHO05D001632 5.1e-06 55.8 232 24.1
Migut.H02524 Erythranthe guttata HOM05D001749 ORTHO05D001632 6.6e-06 55.5 207 29.0
Psat4g095000 Pisum sativum HOM05D001749 ORTHO05D001632 6.6e-06 55.5 223 29.1
Gohir.A12G063300 Gossypium hirsutum HOM05D001749 ORTHO05D001632 8.6e-06 55.1 235 27.7
RcHm_v2.0_Chr6g0265051 Rosa chinensis HOM05D001749 ORTHO05D001632 8.6e-06 55.1 221 26.2
GSVIVG01018920001 Vitis vinifera HOM05D001749 ORTHO05D001632 8.6e-06 55.1 229 26.6


User provided reference genes

Program Settings