Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold327G48784 Striga asiatica HOM05D009707 ORTHO05D010215 4.9e-168 594.3 292 100.0
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 1.1e-87 327.4 275 64.7
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 2.7e-86 322.8 275 64.4
SGA_v2.0_scaffold3G01771 Striga asiatica HOM05D009707 ORTHO05D010215 1.9e-66 256.9 138 92.8
SGA_v2.0_scaffold88G27335 Striga asiatica HOM05D009707 ORTHO05D000277 2.6e-60 236.5 220 60.0
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 6.8e-53 211.8 169 65.1
SGA_v2.0_scaffold28G12043 Striga asiatica HOM05D009707 ORTHO05D000277 4.6e-49 199.1 252 48.8
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 6.0e-49 198.7 249 48.6
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 1.3e-40 171.0 246 44.3
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 1.1e-39 167.9 247 44.1
SGA_v2.0_scaffold169G38726 Striga asiatica HOM05D009707 ORTHO05D010215 1.1e-29 134.8 99 69.7
SGA_v2.0_scaffold152G36802 Striga asiatica HOM05D009707 ORTHO05D010215 3.2e-26 123.2 63 93.7
SGA_v2.0_scaffold70G23408 Striga asiatica HOM05D000228 ORTHO05D001122 6.9e-13 79.0 98 37.8
SGA_v2.0_scaffold409G51096 Striga asiatica HOM05D009666 ORTHO05D000277 9.0e-13 78.6 201 26.9
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 5.9e-12 75.9 254 26.0
RhsimUnG0131900 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.5e-10 69.3 240 26.2
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 2.7e-09 67.0 159 28.3
Hma1.2p1_2726F.1_g327610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.1e-09 65.9 249 22.5
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.1e-09 65.9 288 25.3
SGA_v2.0_scaffold31G12656 Striga asiatica HOM05D009707 ORTHO05D010215 6.1e-09 65.9 151 33.8
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.9e-09 65.5 288 24.3
Rhsim13G0113900 Rhododendron simsii HOM05D000034 ORTHO05D000277 7.9e-09 65.5 326 23.6
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.3e-08 63.9 282 24.5
CSS0036504 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.1e-07 61.6 138 28.3
SGA_v2.0_scaffold103G30052 Striga asiatica HOM05D000034 ORTHO05D000277 1.1e-07 61.6 254 23.2
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 1.1e-07 61.6 254 22.0
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-07 61.2 138 28.3
CSS0044841 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-07 61.2 138 28.3
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-07 61.2 138 28.3
SGA_v2.0_scaffold73G24466 Striga asiatica HOM05D009666 ORTHO05D000277 1.5e-07 61.2 217 24.9
SGA_v2.0_scaffold53G19369 Striga asiatica HOM05D000034 ORTHO05D000277 1.9e-07 60.8 151 27.8
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.3e-07 60.1 138 27.5
SGA_v2.0_scaffold68G22817 Striga asiatica HOM05D009707 ORTHO05D010215 3.3e-07 60.1 242 24.0
CSS0021233 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.3e-07 59.7 138 31.2
ECA233G2230 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.3e-07 59.7 139 30.2
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.4e-07 58.9 229 25.8
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 7.4e-07 58.9 53 47.2
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.7e-07 58.5 223 23.8
SGA_v2.0_scaffold265G46065 Striga asiatica HOM05D012189 ORTHO05D000277 1.3e-06 58.2 99 32.3
SalBow6G3160 Salvia bowleyana HOM05D009908 ORTHO05D012008 1.6e-06 57.8 95 38.9
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.7e-06 56.6 108 32.4
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 3.7e-06 56.6 97 33.0
AUR62007332 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.8e-06 56.2 178 25.8
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-06 56.2 334 18.3
SGA_v2.0_scaffold174G39206 Striga asiatica HOM05D012189 ORTHO05D000277 6.3e-06 55.8 114 30.7
SGA_v2.0_scaffold486G52372 Striga asiatica HOM05D009666 ORTHO05D000277 6.3e-06 55.8 82 32.9


User provided reference genes

Program Settings