Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 0.0e+00 1427.2 732 100.0
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.9e-112 411.0 792 40.0
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.5e-104 384.8 828 36.7
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 6.4e-100 369.4 803 38.0
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 4.2e-91 340.1 817 34.6
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 1.3e-76 292.0 805 34.7
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.4e-70 271.9 793 33.7
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 9.0e-70 269.2 797 34.0
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 5.9e-69 266.5 790 33.7
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 1.3e-68 265.4 768 33.9
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 1.3e-68 265.4 664 37.2
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 3.3e-64 250.8 730 34.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.3e-63 248.8 820 31.6
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 5.0e-60 236.9 834 31.5
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 5.5e-59 233.4 832 30.9
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 6.1e-58 229.9 831 30.9
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 8.8e-57 226.1 782 29.4
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 3.7e-55 220.7 441 40.4
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 2.9e-52 211.1 271 49.8
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.0e-49 202.6 275 45.8
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 4.0e-49 200.7 834 29.5
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 2.6e-48 198.0 801 29.0
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.8e-47 193.7 174 60.9
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.1e-46 192.6 781 29.2
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.1e-46 192.6 795 28.3
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.4e-46 192.2 273 43.6
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.5e-45 187.2 791 28.3
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 5.9e-45 186.8 789 28.1
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 5.9e-45 186.8 794 28.3
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 2.2e-44 184.9 786 28.4
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 3.8e-44 184.1 515 30.7
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 3.8e-44 184.1 435 34.9
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 1.1e-43 182.6 849 27.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.5e-43 181.4 748 29.5
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 6.1e-42 176.8 261 45.6
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.8e-41 175.3 200 51.0
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 2.3e-41 174.9 802 27.1
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 5.2e-41 173.7 840 27.7
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.2e-40 172.6 949 26.3
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 2.0e-40 171.8 807 28.4
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.6e-40 171.4 848 28.2
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 9.8e-40 169.5 649 29.3
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 1.3e-39 169.1 774 28.8
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 1.7e-39 168.7 381 36.2
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.7e-39 168.7 845 28.5
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 1.7e-39 168.7 812 27.6
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 3.7e-39 167.5 755 27.3
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 4.8e-39 167.2 769 26.7
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 8.3e-39 166.4 247 42.9
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 1.4e-38 165.6 465 31.8
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.4e-38 165.6 340 37.4
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.8e-38 165.2 754 28.5
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.8e-38 165.2 807 27.4
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 2.4e-38 164.9 897 27.0
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 9.1e-38 162.9 902 27.4
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 2.7e-37 161.4 817 28.3
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 7.7e-37 159.8 266 41.0
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.3e-36 159.1 840 28.1
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 2.2e-36 158.3 802 27.2
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.1e-35 156.0 812 27.5
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 2.5e-35 154.8 801 26.8
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 2.5e-35 154.8 804 26.6
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 4.2e-35 154.1 825 26.1
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 4.2e-35 154.1 172 50.6
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 7.2e-35 153.3 814 26.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 4.7e-34 150.6 581 28.2
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 6.1e-34 150.2 246 41.1
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 8.0e-34 149.8 303 36.3
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 8.0e-34 149.8 867 26.5
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 2.3e-33 148.3 175 46.9
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.3e-33 148.3 250 37.2
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 2.3e-33 148.3 250 38.4
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.3e-33 148.3 250 37.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 2.3e-33 148.3 250 37.2
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 2.3e-33 148.3 250 38.4
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 5.2e-33 147.1 897 25.4
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 6.8e-33 146.7 322 33.2
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 1.2e-32 146.0 773 25.9
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.5e-32 145.6 249 39.4
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 7.5e-32 143.3 258 38.4
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 7.5e-32 143.3 314 34.7
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 1.3e-31 142.5 263 37.3
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.4e-30 139.0 319 34.2
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 3.1e-30 137.9 330 33.3
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.2e-29 136.0 241 40.2
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.2e-29 136.0 827 25.4
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 1.6e-29 135.6 767 26.2
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 2.0e-29 135.2 253 36.8
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.0e-28 132.9 878 25.3
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.0e-28 132.9 243 39.9
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 1.7e-28 132.1 757 27.2
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 1.7e-28 132.1 249 33.3
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 3.8e-28 131.0 719 27.8
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.8e-26 124.8 242 36.8
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 6.1e-26 123.6 606 25.1
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.8e-25 122.1 281 34.2
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.3e-25 121.7 449 27.8
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 5.2e-25 120.6 674 26.3
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 6.8e-25 120.2 286 32.9
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 6.8e-25 120.2 292 33.2
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 7.5e-24 116.7 131 47.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 1.3e-23 115.9 135 51.1
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.3e-23 115.9 261 33.3
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.3e-23 115.9 174 43.7
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.3e-23 115.9 162 42.6
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 2.2e-23 115.2 419 29.6
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 4.9e-23 114.0 308 32.8
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 4.9e-23 114.0 218 36.7
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 6.4e-23 113.6 689 24.2
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 8.3e-23 113.2 528 24.4
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 1.9e-19 102.1 764 23.7
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 2.5e-19 101.7 210 37.6
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 4.6e-13 80.9 236 32.2
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 8.6e-12 76.6 145 37.2
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 4.3e-11 74.3 136 36.0
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.6e-10 72.4 362 25.4
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 3.1e-09 68.2 254 27.6
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.2e-08 66.2 73 43.8
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 9.8e-08 63.2 335 26.0
CBR_g25863 Chara braunii HOM05D005945 ORTHO05D006749 2.4e-06 58.5 137 28.5
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 7.1e-06 57.0 122 31.1


User provided reference genes

Program Settings