Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 1.4e-93 346.3 170 100.0
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 5.6e-55 218.0 135 83.7
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 2.8e-46 189.1 139 74.8
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 2.2e-43 179.5 117 81.2
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 1.3e-40 170.2 117 77.8
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.0e-32 144.1 123 67.5
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 2.3e-32 142.9 115 64.3
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 8.6e-32 141.0 116 63.8
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 2.5e-31 139.4 130 56.9
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 3.3e-31 139.0 115 63.5
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 4.3e-31 138.7 114 63.2
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 4.3e-31 138.7 114 63.2
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 7.3e-31 137.9 123 61.0
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 1.2e-30 137.1 115 64.3
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.8e-30 136.0 116 62.9
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 4.7e-30 135.2 114 64.9
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 8.1e-30 134.4 115 60.0
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 1.1e-29 134.0 130 56.2
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.4e-29 133.7 114 63.2
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.8e-29 133.3 115 60.0
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 1.8e-29 133.3 115 60.0
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 2.3e-29 132.9 125 59.2
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 3.1e-29 132.5 124 58.1
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 3.1e-29 132.5 124 56.5
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 6.8e-29 131.3 114 62.3
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 6.8e-29 131.3 114 62.3
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 8.9e-29 131.0 123 56.9
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 8.9e-29 131.0 122 62.3
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 1.2e-28 130.6 120 58.3
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 1.5e-28 130.2 115 58.3
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.5e-28 130.2 117 61.5
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 2.0e-28 129.8 149 49.0
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.0e-28 129.8 117 58.1
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 2.0e-28 129.8 116 60.3
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 2.0e-28 129.8 115 60.9
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 2.6e-28 129.4 115 58.3
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 3.4e-28 129.0 115 59.1
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 3.4e-28 129.0 124 56.5
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 4.4e-28 128.6 114 58.8
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 4.4e-28 128.6 115 58.3
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 7.6e-28 127.9 117 57.3
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 9.9e-28 127.5 116 58.6
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 9.9e-28 127.5 116 57.8
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 9.9e-28 127.5 125 53.6
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.3e-27 127.1 124 58.9
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 1.3e-27 127.1 114 57.0
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 1.7e-27 126.7 122 57.4
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 2.2e-27 126.3 120 57.5
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 2.2e-27 126.3 116 57.8
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 2.9e-27 125.9 116 57.8
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.9e-27 125.9 116 58.6
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 3.8e-27 125.6 120 57.5
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 3.8e-27 125.6 115 61.7
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 4.9e-27 125.2 115 60.9
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 56.9
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 56.9
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 56.9
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 56.9
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 56.9
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 6.4e-27 124.8 116 57.8
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 8.4e-27 124.4 110 60.0
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 8.4e-27 124.4 115 57.4
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.4e-26 123.6 130 53.1
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.4e-26 123.6 123 54.5
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 1.9e-26 123.2 112 56.2
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 2.4e-26 122.9 115 57.4
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 2.4e-26 122.9 115 57.4
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 2.4e-26 122.9 115 56.5
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 5.4e-26 121.7 116 58.6
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.2e-25 120.6 125 55.2
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 1.6e-25 120.2 123 53.7
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.6e-25 120.2 115 55.7
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 2.1e-25 119.8 117 55.6
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 2.1e-25 119.8 125 55.2
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 2.7e-25 119.4 126 52.4
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 2.7e-25 119.4 119 56.3
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 3.5e-25 119.0 125 54.4
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 4.6e-25 118.6 116 56.0
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 4.6e-25 118.6 112 58.0
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 1.0e-24 117.5 125 54.4
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 1.0e-24 117.5 116 56.0
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 3.0e-24 115.9 132 50.0
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 3.0e-24 115.9 114 57.9
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 5.1e-24 115.2 149 45.6
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 8.6e-24 114.4 131 51.1
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 8.6e-24 114.4 131 51.1
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 1.1e-23 114.0 113 54.0
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 1.1e-23 114.0 125 51.2
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 1.5e-23 113.6 115 54.8
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 1.5e-23 113.6 127 50.4
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.5e-23 113.6 127 50.4
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.5e-23 113.6 127 50.4
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 1.5e-23 113.6 127 50.4
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 3.3e-23 112.5 118 54.2
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 3.3e-23 112.5 115 56.5
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 3.3e-23 112.5 112 53.6
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 5.6e-23 111.7 115 54.8
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 7.3e-23 111.3 116 50.0
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 7.3e-23 111.3 115 53.9
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 9.6e-23 110.9 59 89.8
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 1.2e-22 110.5 112 52.7
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.8e-22 109.4 102 57.8
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 8.1e-22 107.8 116 51.7
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 1.1e-21 107.5 122 50.8
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 3.1e-21 105.9 116 50.0
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 5.2e-21 105.1 125 48.8
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 6.9e-21 104.8 114 51.8
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 6.9e-21 104.8 116 50.0
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 1.5e-20 103.6 115 50.4
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 9.9e-20 100.9 112 50.9
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 1.7e-19 100.1 109 51.4
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 1.7e-19 100.1 118 46.6
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 8.4e-19 97.8 180 37.8
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 2.7e-17 92.8 63 69.8
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 1.7e-16 90.1 65 64.6
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 5.1e-16 88.6 60 71.7
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.5e-15 87.0 63 68.3
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 3.3e-15 85.9 59 71.2
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 4.3e-15 85.5 66 60.6
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 1.1e-13 80.9 109 41.3
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.4e-13 80.5 52 75.0
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 2.2e-11 73.2 53 66.0
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.9e-11 72.8 56 66.1
Gohir.D01G037901 Gossypium hirsutum HOM05D005570 ORTHO05D007368 7.1e-10 68.2 77 48.1
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 2.1e-09 66.6 72 45.8
Hund30621 Selenicereus undatus HOM05D005570 ORTHO05D007368 6.7e-08 61.6 49 59.2
Hund30622 Selenicereus undatus HOM05D005570 ORTHO05D007368 6.7e-08 61.6 49 59.2
Glyma.20G022600 Glycine max HOM05D005570 ORTHO05D007368 8.7e-08 61.2 91 44.0


User provided reference genes

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