Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold323G48638 Striga asiatica HOM05D008413 ORTHO05D000401 2.2e-114 415.6 207 100.0
SGA_v2.0_scaffold177G39426 Striga asiatica HOM05D008413 ORTHO05D000401 2.6e-78 295.8 193 79.8
SGA_v2.0_scaffold119G32741 Striga asiatica HOM05D008413 ORTHO05D000401 8.2e-77 290.8 195 79.5
SGA_v2.0_scaffold90G27840 Striga asiatica HOM05D008413 ORTHO05D000401 6.9e-76 287.7 195 78.5
SGA_v2.0_scaffold368G50078 Striga asiatica HOM05D008413 ORTHO05D000401 9.1e-76 287.3 194 78.4
SGA_v2.0_scaffold61G21156 Striga asiatica HOM05D008413 ORTHO05D000401 4.2e-73 278.5 194 76.8
SGA_v2.0_scaffold12G05983 Striga asiatica HOM05D008413 ORTHO05D000401 1.0e-58 230.7 194 63.9
SGA_v2.0_scaffold218G42484 Striga asiatica HOM05D008413 ORTHO05D000401 7.2e-57 224.6 198 62.1
SGA_v2.0_scaffold169G38717 Striga asiatica HOM05D008413 ORTHO05D000401 1.9e-41 173.3 196 53.6
SGA_v2.0_scaffold17G08026 Striga asiatica HOM05D008413 ORTHO05D000401 4.7e-40 168.7 201 54.2
SGA_v2.0_scaffold85G26643 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-37 159.5 193 46.1
SGA_v2.0_scaffold234G43617 Striga asiatica HOM05D008413 ORTHO05D000401 8.3e-37 157.9 201 45.3
SGA_v2.0_scaffold50G18468 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-35 153.7 207 44.9
Atru.chr1.1934 Acer truncatum HOM05D008413 ORTHO05D000401 1.0e-34 151.0 203 45.3
SGA_v2.0_scaffold208G41998 Striga asiatica HOM05D008413 ORTHO05D000401 5.0e-34 148.7 197 43.1
Atru.chr1.2141 Acer truncatum HOM05D008413 ORTHO05D000401 4.3e-33 145.6 196 46.4
SGA_v2.0_scaffold4G02509 Striga asiatica HOM05D008413 ORTHO05D000401 2.1e-32 143.3 156 56.4
SGA_v2.0_scaffold90G27895 Striga asiatica HOM05D008413 ORTHO05D000401 8.9e-31 137.9 132 59.8
SGA_v2.0_scaffold28G12014 Striga asiatica HOM05D008413 ORTHO05D000401 1.7e-29 133.7 211 38.9
PSO478G0274 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-24 116.7 197 36.0
PSO541G5389 Papaver somniferum HOM05D008413 ORTHO05D000401 2.1e-24 116.7 197 36.5
PSO591G0033 Papaver somniferum HOM05D008413 ORTHO05D000401 4.0e-23 112.5 198 37.4
PSO017G6541 Papaver somniferum HOM05D008413 ORTHO05D000401 5.2e-23 112.1 194 35.6
SGA_v2.0_scaffold86G26910 Striga asiatica HOM05D008413 ORTHO05D000401 2.9e-21 106.3 68 70.6
SGA_v2.0_scaffold176G39371 Striga asiatica HOM05D008413 ORTHO05D000401 8.3e-21 104.8 194 34.5
PSO782G4524 Papaver somniferum HOM05D008413 ORTHO05D000401 1.4e-20 104.0 200 35.5
PSO063G5428 Papaver somniferum HOM05D008413 ORTHO05D000401 1.9e-20 103.6 190 35.8
PSO063G1996 Papaver somniferum HOM05D008413 ORTHO05D000401 4.1e-20 102.4 190 35.8
PSO541G0947 Papaver somniferum HOM05D008413 ORTHO05D000401 4.1e-20 102.4 107 43.0
SGA_v2.0_scaffold84G26501 Striga asiatica HOM05D008413 ORTHO05D000401 7.1e-20 101.7 159 42.1
PSO384G2190 Papaver somniferum HOM05D008413 ORTHO05D000401 4.6e-19 99.0 196 33.2
PSO675G5967 Papaver somniferum HOM05D008413 ORTHO05D000401 3.9e-18 95.9 174 35.1
SGA_v2.0_scaffold55G19853 Striga asiatica HOM05D008413 ORTHO05D000401 3.9e-18 95.9 196 38.3
SGA_v2.0_scaffold22G09929 Striga asiatica HOM05D008413 ORTHO05D000401 4.3e-17 92.4 191 33.5
SGA_v2.0_scaffold221G42721 Striga asiatica HOM05D008413 ORTHO05D000401 1.2e-14 84.3 183 32.8
SGA_v2.0_scaffold74G24716 Striga asiatica HOM05D008413 ORTHO05D000401 4.4e-14 82.4 185 31.9
Atru.chr11.187 Acer truncatum HOM05D008413 ORTHO05D000401 8.4e-13 78.2 65 55.4
SGA_v2.0_scaffold284G47013 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-12 77.4 178 31.5
SGA_v2.0_scaffold19G08596 Striga asiatica HOM05D008413 ORTHO05D000401 6.6e-10 68.6 103 47.6
PSO339G5332 Papaver somniferum HOM05D008413 ORTHO05D000401 7.3e-09 65.1 192 27.1
Zm00001eb138070 Zea mays HOM05D001576 ORTHO05D000401 7.3e-09 65.1 165 27.9
PSO170G1591 Papaver somniferum HOM05D008413 ORTHO05D000401 1.6e-08 63.9 61 49.2
SGA_v2.0_scaffold38G15030 Striga asiatica HOM05D008413 ORTHO05D000401 1.6e-08 63.9 157 31.2
ECA246G1137 Erigeron canadensis HOM05D000464 ORTHO05D000408 8.1e-08 61.6 88 30.7
SGA_v2.0_scaffold231G43417 Striga asiatica HOM05D008413 ORTHO05D000401 1.4e-07 60.8 53 49.1
Hma1.2p1_1313F.1_g274940 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 1.8e-07 60.5 105 31.4
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-06 57.8 111 27.0
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-06 57.8 111 27.0
ECA247G3187 Erigeron canadensis HOM05D008106 ORTHO05D010314 2.0e-06 57.0 92 28.3
Os07g0554400 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 4.4e-06 55.8 96 31.2


User provided reference genes

Program Settings