Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 3.7e-149 531.6 277 100.0
SGA_v2.0_scaffold290G47309 Striga asiatica HOM05D010621 ORTHO05D402271 6.9e-71 271.6 277 58.8
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 1.5e-49 200.7 127 78.7
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 2.0e-25 120.6 150 45.3
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 1.5e-20 104.4 169 40.8
SGA_v2.0_scaffold7G03810 Striga asiatica HOM05D010621 ORTHO05D000126 1.5e-20 104.4 187 36.9
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 2.3e-18 97.1 80 48.8
SGA_v2.0_scaffold18G08304 Striga asiatica HOM05D010621 ORTHO05D000126 8.8e-18 95.1 160 39.4
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 5.7e-17 92.4 352 26.7
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 1.3e-16 91.3 80 48.8
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.8e-16 90.1 204 27.9
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 5.4e-15 85.9 77 42.9
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 1.6e-14 84.3 174 34.5
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 1.0e-13 81.6 210 32.9
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 2.9e-13 80.1 86 45.3
SGA_v2.0_scaffold68G22947 Striga asiatica HOM05D025057 ORTHO05D000126 1.1e-12 78.2 218 31.2
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 1.9e-12 77.4 90 42.2
SGA_v2.0_scaffold56G20035 Striga asiatica HOM05D010621 ORTHO05D000126 9.5e-12 75.1 119 37.8
TPR.G31906 Trifolium pratense HOM05D000003 ORTHO05D000006 3.6e-11 73.2 169 33.1
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 6.1e-11 72.4 81 39.5
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 8.0e-11 72.0 74 40.5
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-10 71.2 102 33.3
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-10 70.9 98 35.7
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 1.8e-10 70.9 80 40.0
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-10 70.5 80 40.0
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.3e-10 70.5 80 40.0
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 2.3e-10 70.5 128 30.5
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 2.3e-10 70.5 98 36.7
Nitab4.5_0013082g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.0e-10 70.1 80 42.5
Nitab4.5_0011919g0010 Nicotiana tabacum HOM05D007931 ORTHO05D000126 4.0e-10 69.7 80 38.8
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 4.0e-10 69.7 268 23.1
RhsimUnG0010100 Rhododendron simsii HOM05D000003 ORTHO05D000126 6.8e-10 68.9 80 40.0
SGA_v2.0_scaffold259G45819 Striga asiatica HOM05D000003 ORTHO05D000004 6.8e-10 68.9 159 29.6
TPR.G16107 Trifolium pratense HOM05D000003 ORTHO05D000126 6.8e-10 68.9 86 37.2
QL02p095718 Quercus lobata HOM05D000003 ORTHO05D000126 8.9e-10 68.6 79 39.2
SGA_v2.0_scaffold54G19489 Striga asiatica HOM05D010621 ORTHO05D000126 8.9e-10 68.6 206 27.7
QL05p062331 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-09 68.2 166 28.3
Atru.chr13.697 Acer truncatum HOM05D000003 ORTHO05D000126 2.0e-09 67.4 121 29.8
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 2.0e-09 67.4 81 40.7
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 2.6e-09 67.0 78 39.7
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 2.6e-09 67.0 78 39.7
Nitab4.5_0003490g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000126 3.4e-09 66.6 87 35.6
QL01p029685 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-09 66.6 87 39.1
QL03p071133 Quercus lobata HOM05D000003 ORTHO05D000126 3.4e-09 66.6 82 36.6
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.4e-09 66.6 79 39.2
Rhsim05G0174100 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.4e-09 66.6 100 34.0
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 3.4e-09 66.6 148 35.1
Nitab4.5_0007471g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.4e-09 66.2 80 35.0
QL11p036841 Quercus lobata HOM05D000003 ORTHO05D000126 4.4e-09 66.2 79 41.8
Atru.chr4.1290 Acer truncatum HOM05D000003 ORTHO05D000004 5.7e-09 65.9 117 32.5
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 5.7e-09 65.9 78 38.5
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 5.7e-09 65.9 78 38.5
Lj4g0025238 Lotus japonicus HOM05D000003 ORTHO05D000126 5.7e-09 65.9 81 39.5
QL09p026026 Quercus lobata HOM05D000003 ORTHO05D000126 5.7e-09 65.9 79 40.5
TPR.G21894 Trifolium pratense HOM05D000003 ORTHO05D000126 5.7e-09 65.9 101 33.7
Atru.chr7.130 Acer truncatum HOM05D000003 ORTHO05D000126 7.5e-09 65.5 114 31.6
Dinv11369 Davidia involucrata HOM05D000003 ORTHO05D000126 7.5e-09 65.5 130 34.6
QL01p041898 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-09 65.5 112 31.2
QL07p010757 Quercus lobata HOM05D000003 ORTHO05D000126 7.5e-09 65.5 79 40.5
SGA_v2.0_scaffold302G47838 Striga asiatica HOM05D044967 ORTHO05D000126 7.5e-09 65.5 150 31.3
Hma1.2p1_0145F.1_g065260 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 9.8e-09 65.1 79 39.2
QL04p002610 Quercus lobata HOM05D000038 ORTHO05D000126 9.8e-09 65.1 79 39.2
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 9.8e-09 65.1 100 32.0
Atru.chr8.822 Acer truncatum HOM05D000003 ORTHO05D000167 1.3e-08 64.7 127 32.3
Lj4C35T6 Lonicera japonica HOM05D000003 ORTHO05D000126 1.3e-08 64.7 78 44.9
QL01p013473 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-08 64.7 105 34.3
QL02p066394 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-08 64.7 79 35.4
QL07p017701 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-08 64.7 79 38.0
QL93p1863_0020 Quercus lobata HOM05D000003 ORTHO05D000126 1.3e-08 64.7 82 37.8
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 1.3e-08 64.7 75 42.7
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 2.2e-08 63.9 84 38.1
TPR.G36487 Trifolium pratense HOM05D000003 ORTHO05D000126 2.2e-08 63.9 88 38.6
TWI38G2234 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.2e-08 63.9 93 32.3
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 2.9e-08 63.5 81 35.8
QL06p022045 Quercus lobata HOM05D000003 ORTHO05D000126 2.9e-08 63.5 82 31.7
QL04p005346 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-08 63.2 82 34.1
QL07p048591 Quercus lobata HOM05D000003 ORTHO05D000126 3.7e-08 63.2 78 39.7
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 4.9e-08 62.8 103 31.1
Nitab4.5_0001659g0050 Nicotiana tabacum HOM05D007931 ORTHO05D014660 4.9e-08 62.8 175 27.4
QL11p033897 Quercus lobata HOM05D000003 ORTHO05D000126 4.9e-08 62.8 112 29.5
Rhsim06G0055700 Rhododendron simsii HOM05D000003 ORTHO05D000004 4.9e-08 62.8 79 38.0
QL03p060676 Quercus lobata HOM05D000003 ORTHO05D000126 6.4e-08 62.4 94 33.0
QL03p061166 Quercus lobata HOM05D000003 ORTHO05D000126 6.4e-08 62.4 79 35.4
QL07p022353 Quercus lobata HOM05D000003 ORTHO05D037433 6.4e-08 62.4 82 36.6
QL05p028700 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-08 62.0 131 27.5
QL06p009410 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-08 62.0 76 38.2
QL06p021500 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-08 62.0 131 27.5
QL08p035099 Quercus lobata HOM05D000003 ORTHO05D000126 8.3e-08 62.0 90 33.3
Atru.chr1.2640 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-07 61.6 133 29.3
QL01p000290 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 100 32.0
QL10p043858 Quercus lobata HOM05D000003 ORTHO05D000126 1.1e-07 61.6 84 36.9
Rhsim07G0115800 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.1e-07 61.6 111 33.3
Atru.chr8.603 Acer truncatum HOM05D000003 ORTHO05D000126 1.4e-07 61.2 122 31.1
QL02p079362 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-07 61.2 82 36.6
QL04p044617 Quercus lobata HOM05D000003 ORTHO05D000126 1.4e-07 61.2 112 30.4
QL03p018940 Quercus lobata HOM05D000003 ORTHO05D000126 1.8e-07 60.8 82 35.4
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 1.8e-07 60.8 82 32.9
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 1.8e-07 60.8 79 39.2
CSS0013263 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 2.4e-07 60.5 132 33.3
AUR62019705 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.4e-07 60.5 77 37.7
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 2.4e-07 60.5 78 37.2
Lj8P674T6 Lonicera japonica HOM05D000003 ORTHO05D000126 2.4e-07 60.5 78 42.3
Nn2g10957 Nelumbo nucifera HOM05D010490 ORTHO05D000126 2.4e-07 60.5 98 33.7
Nn5g27256 Nelumbo nucifera HOM05D000003 ORTHO05D000126 2.4e-07 60.5 78 43.6
QL09p045506 Quercus lobata HOM05D000003 ORTHO05D000004 2.4e-07 60.5 123 30.9
SGA_v2.0_scaffold232G43493 Striga asiatica HOM05D010621 ORTHO05D000126 2.4e-07 60.5 96 38.5
Dinv23120 Davidia involucrata HOM05D000003 ORTHO05D000126 3.2e-07 60.1 112 32.1
QL03p070763 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-07 60.1 78 41.0
QL09p051624 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-07 60.1 139 28.8
AUR62022247 Chenopodium quinoa HOM05D000003 ORTHO05D000126 4.1e-07 59.7 79 38.0
Dinv03310 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-07 59.7 78 38.5
Dinv10706 Davidia involucrata HOM05D000003 ORTHO05D000126 4.1e-07 59.7 78 35.9
Lj8C13T6 Lonicera japonica HOM05D000003 ORTHO05D000126 4.1e-07 59.7 124 34.7
QL05p001179 Quercus lobata HOM05D000003 ORTHO05D000126 4.1e-07 59.7 119 30.3
QL04p068010 Quercus lobata HOM05D000003 ORTHO05D000126 5.4e-07 59.3 75 37.3
QL05p068376 Quercus lobata HOM05D000003 ORTHO05D000126 5.4e-07 59.3 82 40.2
Atru.chr3.1587 Acer truncatum HOM05D000003 ORTHO05D000004 7.0e-07 58.9 90 33.3
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 7.0e-07 58.9 141 29.1
AUR62035818 Chenopodium quinoa HOM05D000003 ORTHO05D000006 7.0e-07 58.9 79 36.7
Haze_10712 Corylus avellana HOM05D000003 ORTHO05D000126 7.0e-07 58.9 134 32.8
Dinv15867 Davidia involucrata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 78 34.6
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 7.0e-07 58.9 112 28.6
QL02p095319 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 86 37.2
QL04p035145 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 80 37.5
QL05p028665 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 131 26.7
QL05p068878 Quercus lobata HOM05D000003 ORTHO05D000126 7.0e-07 58.9 82 40.2
SGA_v2.0_scaffold161G37849 Striga asiatica HOM05D025911 ORTHO05D000006 7.0e-07 58.9 65 44.6
AUR62022274 Chenopodium quinoa HOM05D000003 ORTHO05D000126 9.2e-07 58.5 79 36.7
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 9.2e-07 58.5 80 35.0
Hma1.2p1_1456F.1_g284630 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 9.2e-07 58.5 62 38.7
QL02p082075 Quercus lobata HOM05D000003 ORTHO05D000126 9.2e-07 58.5 79 35.4
QL07p031105 Quercus lobata HOM05D000003 ORTHO05D000006 9.2e-07 58.5 75 37.3
QL11p053357 Quercus lobata HOM05D000005 ORTHO05D000012 9.2e-07 58.5 94 37.2
Ah.10g030850 Amaranthus hybridus HOM05D000003 ORTHO05D000126 1.2e-06 58.2 53 52.8
QL01p020507 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 80 35.0
QL03p026642 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 89 33.7
QL04p012421 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 82 39.0
QL05p028552 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 151 28.5
QL05p054879 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 96 32.3
QL11p047246 Quercus lobata HOM05D000003 ORTHO05D000126 1.2e-06 58.2 78 39.7
AUR62000896 Chenopodium quinoa HOM05D000003 ORTHO05D000126 1.6e-06 57.8 79 32.9
COL.COLO4_24494 Corchorus olitorius HOM05D000003 ORTHO05D000126 1.6e-06 57.8 80 37.5
Dinv16534 Davidia involucrata HOM05D000003 ORTHO05D000126 1.6e-06 57.8 96 31.2
QL04p035033 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.8 77 36.4
QL04p035245 Quercus lobata HOM05D000003 ORTHO05D000126 1.6e-06 57.8 81 35.8
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 2.0e-06 57.4 86 30.2
COL.COLO4_09268 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.0e-06 57.4 80 41.2
QL03p034523 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 84 35.7
QL04p019848 Quercus lobata HOM05D067218 ORTHO05D000126 2.0e-06 57.4 127 27.6
QL04p035160 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 76 35.5
QL04p039399 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 163 28.2
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 102 34.3
QL08p022458 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 184 26.6
QL11p021674 Quercus lobata HOM05D000003 ORTHO05D000126 2.0e-06 57.4 78 39.7
Atru.chr12.2030 Acer truncatum HOM05D000003 ORTHO05D000126 2.7e-06 57.0 88 30.7
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.7e-06 57.0 76 34.2
COL.COLO4_10561 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.7e-06 57.0 80 36.2
Dinv17959 Davidia involucrata HOM05D000003 ORTHO05D000126 2.7e-06 57.0 76 36.8
Eucgr.F00181 Eucalyptus grandis HOM05D000003 ORTHO05D000126 2.7e-06 57.0 83 37.3
CANSAT01G2163 Cannabis sativa HOM05D000003 ORTHO05D000126 3.5e-06 56.6 76 38.2
QL02p019249 Quercus lobata HOM05D000003 ORTHO05D000126 3.5e-06 56.6 117 29.1
QL03p060940 Quercus lobata HOM05D000005 ORTHO05D000012 4.6e-06 56.2 76 38.2
QL04p019512 Quercus lobata HOM05D000003 ORTHO05D000126 4.6e-06 56.2 77 35.1
QL05p018238 Quercus lobata HOM05D000003 ORTHO05D000126 4.6e-06 56.2 83 33.7
QL08p012905 Quercus lobata HOM05D000003 ORTHO05D000126 4.6e-06 56.2 107 29.9
QL11p029683 Quercus lobata HOM05D000003 ORTHO05D000126 4.6e-06 56.2 83 36.1
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.6e-06 56.2 74 36.5
Rhsim04G0139700 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.6e-06 56.2 113 29.2
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.6e-06 56.2 74 36.5
AUR62015225 Chenopodium quinoa HOM05D000003 ORTHO05D000126 5.9e-06 55.8 79 35.4
Dinv19479 Davidia involucrata HOM05D000077 ORTHO05D000339 5.9e-06 55.8 111 29.7
Dinv32967 Davidia involucrata HOM05D000280 ORTHO05D003998 5.9e-06 55.8 111 29.7
Dinv38130 Davidia involucrata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 78 33.3
Lj3g0024247 Lotus japonicus HOM05D000003 ORTHO05D000126 5.9e-06 55.8 79 35.4
Lj4g0023781 Lotus japonicus HOM05D000003 ORTHO05D000126 5.9e-06 55.8 81 37.0
QL03p034744 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 84 34.5
QL03p062957 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 138 27.5
QL03p070144 Quercus lobata HOM05D000003 ORTHO05D000126 5.9e-06 55.8 82 32.9
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 5.9e-06 55.8 184 32.1
Atru.chr1.2555 Acer truncatum HOM05D000003 ORTHO05D000126 7.8e-06 55.5 95 32.6
AUR62019956 Chenopodium quinoa HOM05D000003 ORTHO05D000126 7.8e-06 55.5 80 35.0
Psat1g200760 Pisum sativum HOM05D000003 ORTHO05D000126 7.8e-06 55.5 81 35.8
QL02p016877 Quercus lobata HOM05D000003 ORTHO05D000126 7.8e-06 55.5 95 31.6
QL08p028447 Quercus lobata HOM05D000003 ORTHO05D000126 7.8e-06 55.5 96 26.0
QL08p034912 Quercus lobata HOM05D000003 ORTHO05D000126 7.8e-06 55.5 76 34.2
QL08p039671 Quercus lobata HOM05D000003 ORTHO05D000126 7.8e-06 55.5 138 30.4


User provided reference genes

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