Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 4.0e-165 584.7 298 100.0
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 2.4e-85 319.7 320 59.7
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 1.7e-83 313.5 318 58.8
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 2.9e-83 312.8 318 58.8
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 7.2e-82 308.1 325 55.7
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 1.6e-81 307.0 317 57.7
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.1e-81 306.6 308 57.8
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.3e-80 303.1 304 57.6
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 3.0e-80 302.8 343 54.8
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 8.7e-80 301.2 269 59.1
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 8.7e-80 301.2 325 54.5
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.5e-79 300.4 313 55.9
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 3.3e-79 299.3 292 58.9
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 5.7e-79 298.5 294 56.5
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 7.4e-79 298.1 289 58.1
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 9.7e-79 297.7 291 56.0
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 9.7e-79 297.7 277 58.8
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 3.7e-78 295.8 294 58.5
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 4.8e-78 295.4 300 55.0
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 4.8e-78 295.4 291 55.7
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 6.3e-78 295.0 276 57.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 8.2e-78 294.7 276 57.2
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 1.1e-77 294.3 289 58.8
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 1.4e-77 293.9 312 54.2
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 1.2e-76 290.8 282 57.8
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 1.5e-76 290.4 295 57.6
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 1.5e-76 290.4 302 56.6
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 3.4e-76 289.3 273 59.7
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 3.4e-76 289.3 335 51.9
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 7.7e-76 288.1 323 52.6
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 1.0e-75 287.7 308 52.9
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 2.2e-75 286.6 316 54.4
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.9e-75 286.2 278 55.4
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 2.9e-75 286.2 278 55.4
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 3.8e-75 285.8 276 57.6
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.1e-74 284.3 292 55.5
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 1.4e-74 283.9 294 53.1
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 3.2e-74 282.7 315 54.0
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 4.2e-74 282.3 313 52.1
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 9.4e-74 281.2 275 56.0
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 9.4e-74 281.2 314 52.5
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 9.4e-74 281.2 281 56.6
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 2.7e-73 279.6 309 54.4
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 3.6e-73 279.3 294 55.4
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 3.6e-73 279.3 299 53.8
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 4.6e-73 278.9 313 54.0
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 6.1e-73 278.5 278 56.1
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 1.4e-72 277.3 314 51.9
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 1.8e-72 276.9 268 56.0
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 2.3e-72 276.6 315 51.4
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 3.0e-72 276.2 290 54.5
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 3.3e-71 272.7 296 53.4
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 7.4e-71 271.6 314 50.3
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 2.8e-70 269.6 268 56.7
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 3.7e-70 269.2 294 53.7
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 8.2e-70 268.1 300 53.0
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 1.1e-69 267.7 297 52.5
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 1.1e-69 267.7 292 52.1
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 1.8e-69 266.9 350 46.6
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 2.4e-69 266.5 315 51.1
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 6.9e-69 265.0 294 52.4
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 9.1e-69 264.6 299 50.8
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 2.6e-68 263.1 298 50.0
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 7.7e-68 261.5 327 50.5
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 7.7e-68 261.5 329 49.5
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 1.3e-67 260.8 275 54.9
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 2.2e-67 260.0 317 49.2
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 2.2e-67 260.0 321 49.8
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 3.8e-67 259.2 305 52.1
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 1.2e-65 254.2 308 50.0
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 3.6e-65 252.7 307 50.5
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 4.7e-65 252.3 306 50.7
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 6.1e-65 251.9 315 48.6
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.4e-64 250.8 314 50.0
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 2.3e-64 250.0 302 51.7
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 3.0e-64 249.6 302 51.3
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.6e-63 246.5 275 52.7
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 4.4e-63 245.7 282 52.8
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 4.4e-63 245.7 274 51.1
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.3e-62 244.2 296 50.0
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 4.8e-62 242.3 282 51.4
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 4.8e-62 242.3 282 51.4
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 1.1e-61 241.1 274 49.6
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 2.4e-61 240.0 296 49.3
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 3.1e-61 239.6 272 49.3
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 1.0e-59 234.6 285 51.6
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 1.7e-59 233.8 312 45.8
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 5.0e-59 232.3 306 45.8
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.4e-53 214.2 202 55.0
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 4.4e-47 192.6 307 41.4
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 1.3e-46 191.0 272 40.4
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 6.5e-43 178.7 275 36.0
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 1.1e-37 161.4 173 50.3
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.7e-35 154.1 120 64.2
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 2.3e-35 153.7 131 59.5
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 8.9e-32 141.7 180 50.0
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 1.4e-29 134.4 263 33.5
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 1.2e-28 131.3 265 35.5
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 1.1e-21 108.2 260 37.3
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 6.6e-19 99.0 115 52.2
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.3e-18 96.7 202 40.1
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 4.3e-18 96.3 129 45.0
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.6e-17 93.2 252 28.2
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 1.6e-12 77.8 111 44.1
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 2.1e-12 77.4 280 26.1
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 3.8e-06 56.6 293 20.8


User provided reference genes

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