Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 5.4e-57 224.2 118 100.0
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 6.4e-26 120.9 87 77.0
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.1e-22 110.2 104 62.5
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 1.6e-21 106.3 87 65.5
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.6e-21 106.3 87 69.0
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 2.1e-21 105.9 89 64.0
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 2.1e-21 105.9 87 67.8
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 3.6e-21 105.1 87 64.4
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 8.1e-21 104.0 87 60.9
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 8.1e-21 104.0 87 64.4
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 8.1e-21 104.0 85 67.1
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.8e-20 102.8 87 62.1
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 1.8e-20 102.8 87 62.1
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 1.8e-20 102.8 87 62.1
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 2.4e-20 102.4 89 61.8
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 3.1e-20 102.1 87 62.1
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 4.0e-20 101.7 87 62.1
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 4.0e-20 101.7 87 63.2
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 4.0e-20 101.7 89 59.6
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 4.0e-20 101.7 87 64.4
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 4.0e-20 101.7 87 62.1
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 5.3e-20 101.3 87 62.1
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 5.3e-20 101.3 87 62.1
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 5.3e-20 101.3 87 60.9
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 5.3e-20 101.3 87 62.1
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 6.9e-20 100.9 87 59.8
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 6.9e-20 100.9 87 60.9
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.2e-19 100.1 89 60.7
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.2e-19 100.1 87 59.8
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.2e-19 100.1 87 62.1
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.2e-19 100.1 87 60.9
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 1.5e-19 99.8 87 59.8
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.5e-19 99.8 87 59.8
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 1.5e-19 99.8 87 62.1
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 2.0e-19 99.4 86 61.6
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.0e-19 99.4 87 58.6
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.6e-19 99.0 87 58.6
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 2.6e-19 99.0 87 58.6
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 2.6e-19 99.0 87 58.6
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 2.6e-19 99.0 87 62.1
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.6e-19 99.0 91 56.0
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 3.4e-19 98.6 87 58.6
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 4.5e-19 98.2 87 58.6
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 5.8e-19 97.8 87 58.6
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 5.8e-19 97.8 87 58.6
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 5.8e-19 97.8 87 59.8
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 7.6e-19 97.4 87 60.9
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 9.9e-19 97.1 87 59.8
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 1.3e-18 96.7 87 62.1
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 1.3e-18 96.7 87 58.6
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 1.3e-18 96.7 87 58.6
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 1.7e-18 96.3 104 55.8
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 1.7e-18 96.3 87 58.6
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.7e-18 96.3 91 60.4
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 1.7e-18 96.3 91 60.4
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.7e-18 96.3 87 58.6
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 2.2e-18 95.9 87 56.3
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 2.2e-18 95.9 87 56.3
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 2.2e-18 95.9 87 57.5
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.2e-18 95.9 87 56.3
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 3.8e-18 95.1 87 56.3
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 3.8e-18 95.1 85 61.2
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 3.8e-18 95.1 87 58.6
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 4.9e-18 94.7 87 58.6
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 6.4e-18 94.4 86 59.3
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 6.4e-18 94.4 87 57.5
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 6.4e-18 94.4 87 57.5
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 6.4e-18 94.4 87 57.5
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 8.4e-18 94.0 87 59.8
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 8.4e-18 94.0 85 60.0
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 8.4e-18 94.0 87 57.5
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 1.1e-17 93.6 87 55.2
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.1e-17 93.6 87 58.6
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 1.1e-17 93.6 87 56.3
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 1.1e-17 93.6 87 57.5
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 1.4e-17 93.2 87 56.3
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-17 93.2 87 55.2
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 1.4e-17 93.2 87 56.3
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 1.9e-17 92.8 87 58.6
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 1.9e-17 92.8 84 59.5
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 1.9e-17 92.8 87 57.5
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 2.4e-17 92.4 87 55.2
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.4e-17 92.4 87 57.5
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 3.2e-17 92.0 87 57.5
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 3.2e-17 92.0 87 54.0
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 4.2e-17 91.7 87 57.5
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 4.2e-17 91.7 84 57.1
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 4.2e-17 91.7 87 55.2
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 5.4e-17 91.3 87 58.6
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 5.4e-17 91.3 87 56.3
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 7.1e-17 90.9 87 56.3
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 7.1e-17 90.9 87 56.3
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 7.1e-17 90.9 87 54.0
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 7.1e-17 90.9 89 56.2
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 7.1e-17 90.9 87 56.3
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 9.3e-17 90.5 87 55.2
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 9.3e-17 90.5 87 57.5
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 9.3e-17 90.5 87 55.2
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 9.3e-17 90.5 87 56.3
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 1.2e-16 90.1 89 53.9
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 1.2e-16 90.1 87 55.2
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 1.2e-16 90.1 83 55.4
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 1.6e-16 89.7 87 51.7
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.6e-16 89.7 79 58.2
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.6e-16 89.7 87 52.9
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.6e-16 89.7 87 52.9
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 1.6e-16 89.7 87 56.3
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 2.7e-16 89.0 79 58.2
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 2.7e-16 89.0 83 55.4
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 3.5e-16 88.6 87 54.0
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 4.6e-16 88.2 87 55.2
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 6.0e-16 87.8 87 54.0
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 6.0e-16 87.8 79 58.2
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.0e-15 87.0 87 52.9
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 1.0e-15 87.0 87 55.2
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.0e-15 87.0 87 52.9
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 1.3e-15 86.7 87 52.9
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 1.3e-15 86.7 87 52.9
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 1.3e-15 86.7 87 52.9
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 1.3e-15 86.7 87 52.9
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 2.3e-15 85.9 87 51.7
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 3.0e-15 85.5 87 51.7
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 3.0e-15 85.5 87 51.7
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 3.0e-15 85.5 87 51.7
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 3.9e-15 85.1 87 51.7
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 3.9e-15 85.1 79 57.0
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 5.1e-15 84.7 79 57.0
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 5.1e-15 84.7 79 57.0
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 6.7e-15 84.3 87 51.7
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 8.7e-15 84.0 85 51.8
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 8.7e-15 84.0 87 58.6
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 8.7e-15 84.0 79 57.0
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 1.5e-14 83.2 85 51.8
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.5e-14 83.2 85 51.8
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.9e-14 82.8 85 50.6
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.9e-14 82.8 85 51.8
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 4.3e-14 81.6 87 52.9
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 4.3e-14 81.6 70 60.0
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 7.4e-14 80.9 71 60.6
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 9.6e-14 80.5 92 50.0
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.3e-13 80.1 87 51.7
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.3e-13 80.1 87 51.7
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.3e-13 80.1 85 50.6
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 1.6e-13 79.7 108 47.2
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 2.1e-13 79.3 71 59.2
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 2.8e-13 79.0 87 50.6
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.8e-13 79.0 92 48.9
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 3.7e-13 78.6 85 49.4
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 6.2e-13 77.8 87 49.4
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 8.1e-13 77.4 87 51.7
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 6.9e-12 74.3 70 55.7
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 2.2e-10 69.3 122 37.7
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 2.2e-10 69.3 80 47.5
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 4.9e-10 68.2 82 48.8
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 4.9e-10 68.2 47 70.2
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 6.4e-10 67.8 85 45.9
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-09 66.6 87 40.2
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 1.4e-09 66.6 68 54.4
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.9e-09 66.2 74 48.6
HanXRQChr05g0134001 Helianthus annuus HOM05D000626 ORTHO05D003868 9.3e-09 63.9 62 58.1
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 6.0e-08 61.2 92 39.1
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 7.9e-08 60.8 84 38.1
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 3.9e-07 58.5 71 50.7
HPP92_010240 Vanilla planifolia HOM05D000626 ORTHO05D003868 5.6e-06 54.7 59 52.5
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 9.6e-06 53.9 43 60.5


User provided reference genes

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