Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 3.2e-107 391.7 195 100.0
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 6.8e-65 251.1 193 68.4
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 3.4e-64 248.8 201 67.2
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 9.8e-64 247.3 195 66.7
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 9.5e-59 230.7 186 68.8
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.2e-58 230.3 156 75.0
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.4e-57 226.9 139 80.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 5.2e-57 224.9 127 82.7
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 4.4e-56 221.9 143 76.9
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 9.8e-56 220.7 138 77.5
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 9.8e-56 220.7 159 69.8
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 1.7e-55 219.9 138 77.5
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 1.7e-55 219.9 151 74.2
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 3.7e-55 218.8 141 76.6
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.4e-54 216.1 198 60.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 2.4e-54 216.1 198 60.6
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 3.2e-54 215.7 138 76.8
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 4.1e-54 215.3 141 73.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 5.4e-54 214.9 145 74.5
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.2e-53 213.8 137 75.2
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.7e-53 212.6 179 63.1
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 4.6e-53 211.8 160 68.1
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 7.8e-53 211.1 138 76.1
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.0e-52 210.7 167 65.3
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.3e-52 210.3 177 63.8
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.7e-52 209.9 142 73.9
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 3.0e-52 209.1 125 82.4
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 5.0e-52 208.4 142 72.5
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 6.6e-52 208.0 183 62.3
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.6e-52 208.0 154 68.2
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 8.6e-52 207.6 182 59.3
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.1e-51 207.2 142 71.1
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.1e-51 207.2 142 71.8
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 9.5e-51 204.1 138 71.7
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.2e-50 203.8 193 59.6
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 1.6e-50 203.4 147 67.3
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 2.8e-50 202.6 203 57.1
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 6.2e-50 201.4 152 67.8
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 8.1e-50 201.1 123 76.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 2.3e-49 199.5 139 69.8
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 6.8e-49 198.0 174 62.1
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 8.9e-49 197.6 114 82.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.2e-48 197.2 199 56.8
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.2e-48 197.2 174 61.5
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 1.5e-48 196.8 155 64.5
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 4.4e-48 195.3 178 59.0
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 5.8e-48 194.9 138 67.4
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.8e-48 194.9 142 67.6
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 7.5e-48 194.5 140 65.7
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 7.5e-48 194.5 126 75.4
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 7.5e-48 194.5 178 59.6
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 7.5e-48 194.5 140 67.9
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 7.5e-48 194.5 137 66.4
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 9.9e-48 194.1 148 66.2
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 2.9e-47 192.6 114 79.8
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.1e-46 190.7 135 68.1
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 3.2e-46 189.1 181 58.0
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 2.1e-45 186.4 123 72.4
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 2.7e-45 186.0 147 62.6
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 3.5e-45 185.7 131 68.7
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.0e-44 184.1 137 62.8
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 2.3e-44 183.0 127 69.3
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 8.6e-44 181.0 176 59.1
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 8.6e-44 181.0 166 59.6
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 8.6e-44 181.0 166 59.6
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 8.6e-44 181.0 152 64.5
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 8.6e-44 181.0 171 57.3
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.1e-43 180.6 145 66.2
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.1e-43 180.6 125 73.6
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.1e-43 180.6 162 58.6
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.5e-43 180.3 186 55.4
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.9e-43 179.9 125 71.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 2.5e-43 179.5 182 54.4
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.5e-43 179.5 126 69.8
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 9.5e-43 177.6 163 58.3
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 9.5e-43 177.6 163 58.3
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 9.5e-43 177.6 157 63.1
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 4.7e-42 175.3 127 69.3
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 8.1e-42 174.5 164 56.1
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.8e-41 173.3 141 65.2
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 9.9e-40 167.5 171 57.3
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.3e-39 167.2 132 65.2
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.9e-39 166.0 121 70.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 8.4e-39 164.5 181 54.1
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.4e-38 163.7 180 53.3
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.2e-38 162.5 164 56.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 5.4e-38 161.8 137 63.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.1e-37 159.8 169 55.0
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.7e-37 159.5 127 64.6
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 3.9e-36 155.6 138 60.9
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 3.9e-36 155.6 138 60.9
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 3.4e-32 142.5 139 51.1
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 2.9e-31 139.4 125 56.0
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 7.1e-30 134.8 118 57.6
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 2.7e-29 132.9 126 58.7
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.0e-28 129.4 122 54.1
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.3e-26 124.0 82 70.7
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.4e-25 120.6 86 69.8
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 3.1e-25 119.4 82 69.5
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.5e-24 115.5 82 67.1
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.3e-23 114.0 82 65.9
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.6e-18 97.1 80 60.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 3.9e-12 75.9 51 68.6
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 3.4e-08 62.8 52 59.6


User provided reference genes

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