Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12890 Striga asiatica HOM05D002441 ORTHO05D002376 4.1e-209 731.1 360 100.0
SGA_v2.0_scaffold28G11887 Striga asiatica HOM05D002441 ORTHO05D000174 1.9e-145 519.6 381 73.0
SGA_v2.0_scaffold123G33403 Striga asiatica HOM05D002441 ORTHO05D000174 6.5e-53 212.2 331 44.7
SGA_v2.0_scaffold15G07417 Striga asiatica HOM05D002441 ORTHO05D000174 3.7e-24 116.7 144 48.6
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-23 113.6 379 23.7
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.9e-20 104.4 380 25.0
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-18 97.4 374 24.6
Medtr7g110100 Medicago truncatula HOM05D008036 ORTHO05D000174 5.2e-18 96.3 378 24.3
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-17 95.1 374 24.3
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 2.0e-17 94.4 374 24.6
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 2.6e-17 94.0 358 24.9
Nitab4.5_0000305g0130 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-16 91.3 311 24.4
CAN.G764.9 Capsicum annuum HOM05D002441 ORTHO05D002376 2.2e-16 90.9 167 31.1
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 2.2e-16 90.9 375 23.2
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.8e-16 90.5 389 23.9
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 3.7e-16 90.1 343 23.9
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.7e-16 90.1 186 31.7
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 6.3e-16 89.4 383 24.0
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.1e-15 88.6 380 23.4
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.0e-15 85.9 160 33.1
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 9.1e-15 85.5 379 22.2
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.1e-15 85.5 192 28.1
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.0e-14 84.3 185 28.1
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 3.5e-14 83.6 377 21.8
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 4.5e-14 83.2 328 21.6
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 5.9e-14 82.8 128 35.9
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.0e-13 82.0 165 31.5
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 1.0e-13 82.0 190 30.5
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.2e-13 80.9 249 28.1
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 3.8e-13 80.1 334 24.3
arahy.Tifrunner.gnm1.ann1.36ZJIB Arachis hypogaea HOM05D002441 ORTHO05D002376 6.5e-13 79.3 332 23.5
Medtr3g452170 Medicago truncatula HOM05D008036 ORTHO05D000174 6.5e-13 79.3 274 24.1
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 6.5e-13 79.3 348 26.4
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.5e-13 79.0 357 24.1
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 8.5e-13 79.0 367 22.6
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.5e-12 78.2 357 24.1
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-12 78.2 342 23.1
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 1.5e-12 78.2 168 28.6
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-12 77.8 357 24.1
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 1.9e-12 77.8 357 24.1
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 2.5e-12 77.4 357 24.1
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 4.2e-12 76.6 359 24.0
SGA_v2.0_scaffold241G44194 Striga asiatica HOM05D011787 ORTHO05D008317 1.2e-11 75.1 195 28.2
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 2.7e-11 73.9 375 21.6
Nitab4.5_0021602g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.0e-11 72.4 105 33.3
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 1.0e-10 72.0 383 23.8
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 1.4e-10 71.6 114 33.3
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.4e-10 71.6 381 22.8
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 1.8e-10 71.2 381 26.0
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 2.3e-10 70.9 237 27.8
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 3.0e-10 70.5 198 26.8
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 5.2e-10 69.7 385 25.2
C07p16110 Brassica napus HOM05D009574 ORTHO05D012637 1.2e-09 68.6 231 26.8
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.4e-09 67.0 220 23.2
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.8e-09 65.5 191 26.2
Glyma.13G025000 Glycine max HOM05D002090 ORTHO05D001923 1.7e-08 64.7 384 24.7
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 4.8e-08 63.2 384 24.2
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 4.8e-08 63.2 327 23.5
Ah.11g041650 Amaranthus hybridus HOM05D000353 ORTHO05D000174 1.1e-07 62.0 245 23.3
Medtr0048s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 1.1e-07 62.0 243 22.2
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.1e-07 62.0 327 23.2
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-07 60.8 385 21.6
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-07 60.5 188 26.6
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-07 60.5 128 28.1
CAN.G598.12 Capsicum annuum HOM05D002441 ORTHO05D002376 4.1e-07 60.1 163 25.8
ECA232G2412 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-07 59.7 188 26.6
ECA238G1832 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.4e-07 59.7 297 23.9
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 5.4e-07 59.7 218 24.3
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 5.4e-07 59.7 116 28.4
LjContig00155g0001945 Lotus japonicus HOM05D000353 ORTHO05D000174 7.0e-07 59.3 224 25.0
Nitab4.5_0000265g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.1e-07 58.9 108 26.9
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.2e-06 58.5 125 31.2
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 1.6e-06 58.2 110 30.0
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.7e-06 57.4 184 26.6


User provided reference genes

Program Settings