Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 2166.3 1090 100.0
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 1699.9 1041 85.3
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 0.0e+00 1392.9 1018 72.7
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 1348.6 880 80.2
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 0.0e+00 1331.6 1016 69.6
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 0.0e+00 1181.4 1055 60.7
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 0.0e+00 1155.2 1016 61.9
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 0.0e+00 1153.3 1019 61.8
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 0.0e+00 1150.6 1019 61.6
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 0.0e+00 1121.3 980 62.2
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 0.0e+00 1112.4 1017 60.5
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1099.3 1011 59.3
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 0.0e+00 1085.5 1012 58.1
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 0.0e+00 1082.8 1005 59.0
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 0.0e+00 1080.5 957 61.2
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 2.2e-311 1072.4 1007 58.3
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.1e-310 1070.1 1018 56.7
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.3e-310 1068.5 1021 57.5
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 4.8e-309 1064.7 1010 57.4
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 9.0e-308 1060.4 990 58.9
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.7e-306 1056.2 992 57.6
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.5e-305 1052.4 1168 52.1
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 9.3e-305 1050.4 1021 57.9
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 2.7e-304 1048.9 1014 56.5
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 1.0e-303 1047.0 1000 57.3
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 1.3e-303 1046.6 1006 58.1
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 3.0e-303 1045.4 992 57.1
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 8.7e-303 1043.9 1014 56.3
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 3.7e-301 1038.5 1024 56.6
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 6.2e-301 1037.7 992 56.9
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 8.2e-301 1037.3 1040 56.8
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 3.4e-299 1031.9 992 56.9
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 7.6e-299 1030.8 992 56.0
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 1.3e-298 1030.0 1025 55.2
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 1.7e-298 1029.6 991 56.8
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 2.9e-298 1028.9 1024 56.7
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 6.5e-298 1027.7 930 60.0
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 7.2e-297 1024.2 1021 56.2
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 1.2e-296 1023.5 1021 56.3
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 1.6e-296 1023.1 993 56.4
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 6.1e-296 1021.1 997 55.8
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 7.9e-296 1020.8 988 57.0
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 5.1e-295 1018.1 1023 54.3
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 1.1e-294 1016.9 989 55.6
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 3.3e-294 1015.4 1012 55.6
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 7.4e-294 1014.2 994 57.1
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 9.7e-294 1013.8 1013 55.7
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 2.2e-293 1012.7 1108 52.2
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 6.3e-293 1011.1 1016 54.9
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 1.1e-292 1010.4 1051 52.8
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 2.4e-292 1009.2 994 57.1
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 2.4e-292 1009.2 1014 55.2
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 2.4e-292 1009.2 995 56.4
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 3.1e-292 1008.8 991 57.2
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 4.1e-292 1008.4 1029 53.2
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 4.1e-292 1008.4 1025 53.2
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 5.3e-292 1008.1 1002 56.6
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 5.3e-292 1008.1 990 56.6
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 6.9e-292 1007.7 1001 55.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 6.9e-292 1007.7 1016 54.5
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 9.0e-292 1007.3 1012 55.5
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 2.6e-291 1005.7 1007 55.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 4.5e-291 1005.0 1016 54.4
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 1.0e-290 1003.8 998 54.4
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 1.7e-290 1003.0 982 55.5
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 1.7e-290 1003.0 991 54.9
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.2e-290 1002.7 1014 54.9
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 6.5e-290 1001.1 1035 54.6
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 3.2e-289 998.8 1002 53.7
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 7.2e-289 997.7 1020 52.9
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 1.6e-288 996.5 997 54.2
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.6e-288 996.5 990 56.4
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 1.6e-288 996.5 990 54.9
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 2.1e-288 996.1 991 56.5
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 2.1e-288 996.1 998 54.0
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.7e-288 995.7 1016 54.3
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 4.6e-288 995.0 1029 52.4
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 6.1e-288 994.6 993 55.9
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 1.4e-287 993.4 999 53.6
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 5.1e-287 991.5 1002 53.7
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 5.1e-287 991.5 993 55.3
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 6.7e-287 991.1 998 53.8
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 2.5e-286 989.2 1003 53.8
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 3.3e-286 988.8 941 58.7
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 7.4e-286 987.6 1001 55.1
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 4.8e-285 984.9 993 53.8
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.8e-284 983.0 993 53.9
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 2.4e-284 982.6 993 53.7
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 1.5e-283 979.9 977 55.2
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 1.7e-282 976.5 1001 53.6
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 2.9e-282 975.7 1015 53.4
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 5.0e-282 974.9 1013 53.9
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 4.2e-281 971.8 980 54.5
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 3.6e-280 968.8 1052 52.2
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 6.1e-280 968.0 984 54.7
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 3.9e-279 965.3 1025 52.8
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 7.4e-278 961.1 1019 53.1
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 9.7e-278 960.7 1019 53.2
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 4.1e-276 955.3 980 54.3
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 3.5e-275 952.2 1004 53.4
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 8.5e-274 947.6 977 54.1
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.1e-273 947.2 979 53.9
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.9e-273 946.4 976 53.8
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 7.0e-268 927.9 993 52.6
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 4.8e-261 905.2 1087 50.0
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 1.4e-260 903.7 928 54.2
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 1.2e-259 900.6 1017 50.2
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 3.4e-254 882.5 997 52.3
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 1.3e-250 870.5 888 54.5
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 7.3e-241 838.2 997 47.0
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 1.4e-236 823.9 938 47.8
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.4e-230 802.4 1017 47.1
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 2.7e-227 793.1 1033 45.5
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.7e-219 766.5 1029 44.2
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 3.0e-218 763.1 1027 44.1
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 1.1e-215 754.6 1078 42.1
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-214 751.1 975 44.1
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 5.8e-206 722.2 992 45.4
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 1.2e-198 698.0 723 54.8
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 5.3e-191 672.5 663 56.1
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 2.9e-189 666.8 994 43.1
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.3e-186 657.1 651 55.8
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 8.8e-170 602.1 1061 36.6
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 5.2e-162 576.2 1046 35.9
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.6e-158 564.7 449 66.6
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 5.5e-156 556.2 1018 35.8
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 2.7e-147 527.3 520 57.1
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 1.1e-143 515.4 945 35.8
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.5e-142 510.4 654 43.7
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 7.7e-142 509.2 464 59.1
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 5.8e-121 439.9 239 93.7
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 3.2e-103 380.9 342 61.7
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.5e-100 372.1 730 33.8
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 3.3e-92 344.4 489 42.1
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 5.4e-87 327.0 297 62.6
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 2.7e-86 324.7 397 47.1
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.7e-75 287.7 337 47.2
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 6.2e-75 287.0 757 29.3
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-57 229.6 363 36.4
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 8.5e-56 223.4 289 45.0
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 4.7e-54 217.6 887 25.7
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-50 205.7 289 38.1
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.2e-47 194.9 388 34.0
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 7.2e-47 193.7 165 59.4
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 3.0e-45 188.3 286 40.6
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-42 178.7 291 36.4
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 1.2e-41 176.4 146 61.6
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 3.5e-41 174.9 146 61.0
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 7.7e-41 173.7 1025 21.6
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 1.2e-38 166.4 293 33.4
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-38 166.0 168 46.4
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 1.0e-37 163.3 110 68.2
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 4.0e-37 161.4 1236 20.2
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.3e-36 158.3 155 46.5
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-35 156.4 136 52.2
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-35 156.0 160 48.1
PRCOL_00004619 Prasinoderma coloniale HOM05D003580 ORTHO05D004441 7.0e-34 150.6 941 21.3
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.5e-33 147.9 152 47.4
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-32 146.7 149 45.6
FvH4_3g34230 Fragaria vesca HOM05D003580 ORTHO05D004441 8.5e-32 143.7 146 55.5
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.5e-32 143.7 140 49.3
TPR.G7717 Trifolium pratense HOM05D003580 ORTHO05D004441 5.5e-31 141.0 127 59.1
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.2e-29 134.4 122 50.8
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 8.3e-27 127.1 99 59.6
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.9e-25 120.9 142 41.5
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 2.9e-24 118.6 130 43.1
Actinidia22485 Actinidia chinensis HOM05D003580 ORTHO05D004441 2.6e-20 105.5 183 40.4
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.6e-20 105.5 103 47.6
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.4e-20 105.1 120 43.3
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 5.7e-20 104.4 124 41.9
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-19 103.2 119 41.2
QL01p051634 Quercus lobata HOM05D003580 ORTHO05D004441 2.8e-19 102.1 291 32.0
Cpa.g.c39794 Carica papaya HOM05D003580 ORTHO05D004441 4.9e-19 101.3 66 74.2
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.3e-19 100.9 134 39.6
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-16 93.2 89 48.3
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-16 92.8 104 45.2
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 1.9e-15 89.4 66 57.6
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 2.5e-15 89.0 97 51.5
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-14 86.3 74 52.7
VMungo1383G0656 Vigna mungo HOM05D003580 ORTHO05D004441 5.4e-10 71.2 51 70.6
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 1.6e-09 69.7 97 44.3
SGA_v2.0_scaffold88G27351 Striga asiatica HOM05D000351 ORTHO05D000250 1.5e-07 63.2 31 90.3
Actinidia35884 Actinidia chinensis HOM05D000084 ORTHO05D014724 5.6e-07 61.2 123 34.1


User provided reference genes

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