Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 1969.1 991 100.0
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 1696.8 1041 85.3
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 0.0e+00 1190.6 820 76.7
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 0.0e+00 1139.8 927 66.9
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 0.0e+00 1087.4 959 63.2
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 3.7e-284 981.9 962 57.1
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 5.9e-282 974.5 961 56.7
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 5.0e-281 971.5 961 56.5
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 9.4e-280 967.2 961 56.3
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 1.8e-270 936.4 961 55.0
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 3.6e-263 912.1 935 55.9
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 4.0e-262 908.7 923 55.5
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 4.9e-260 901.7 922 55.4
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 6.2e-255 884.8 952 52.3
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 3.1e-254 882.5 928 53.6
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 6.6e-249 864.8 957 52.1
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 4.3e-248 862.1 927 52.2
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 1.8e-246 856.7 962 50.8
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 2.0e-245 853.2 927 52.3
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 5.8e-245 851.7 925 51.9
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 2.9e-244 849.4 1108 46.8
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 8.3e-244 847.8 930 51.3
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 8.3e-244 847.8 930 51.7
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 5.4e-243 845.1 934 51.7
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 4.6e-242 842.0 962 51.8
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 4.6e-242 842.0 930 51.4
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 1.7e-241 840.1 971 50.3
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 2.3e-241 839.7 931 51.2
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 2.5e-240 836.3 938 50.9
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 3.6e-239 832.4 944 49.5
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 3.1e-238 829.3 939 50.5
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 9.9e-237 824.3 967 49.5
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 1.7e-236 823.5 930 50.6
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 8.4e-236 821.2 930 50.9
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 8.4e-236 821.2 919 51.6
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 2.4e-235 819.7 927 50.9
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 9.2e-235 817.8 969 49.1
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 1.2e-234 817.4 930 51.1
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 1.6e-234 817.0 930 50.2
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 2.7e-234 816.2 965 48.1
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 3.5e-234 815.8 992 50.4
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 6.0e-234 815.1 969 49.1
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 7.8e-234 814.7 951 49.3
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 3.0e-233 812.8 935 49.5
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 3.0e-233 812.8 1000 47.7
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 3.0e-233 812.8 933 51.1
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 3.9e-233 812.4 933 48.9
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 3.3e-232 809.3 973 48.8
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 3.3e-232 809.3 930 49.7
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 5.6e-232 808.5 929 50.3
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 7.3e-232 808.1 932 49.2
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 2.1e-231 806.6 960 47.8
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 2.1e-231 806.6 964 49.2
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.8e-231 806.2 963 48.9
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 3.6e-231 805.8 934 48.8
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 3.6e-231 805.8 933 48.2
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 3.6e-231 805.8 937 49.0
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 3.6e-231 805.8 938 50.7
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 3.6e-231 805.8 932 50.1
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 8.1e-231 804.7 935 48.2
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 1.8e-230 803.5 939 48.7
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 2.4e-230 803.1 1065 46.1
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 6.9e-230 801.6 966 48.6
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 9.0e-230 801.2 961 49.0
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 2.0e-229 800.0 927 49.0
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.0e-229 800.0 904 50.9
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 2.0e-229 800.0 964 48.9
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.4e-229 799.3 966 48.6
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 3.4e-229 799.3 931 49.1
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 4.4e-229 798.9 929 50.6
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 5.8e-229 798.5 928 49.5
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 5.8e-229 798.5 928 48.8
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.7e-228 797.0 925 49.3
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 2.9e-228 796.2 935 48.6
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 3.8e-228 795.8 966 48.4
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 3.8e-228 795.8 931 50.4
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 8.4e-228 794.7 935 50.5
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 1.9e-227 793.5 925 49.1
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 3.2e-227 792.7 925 50.3
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 4.2e-227 792.3 894 51.0
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 9.3e-227 791.2 925 49.0
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 1.2e-226 790.8 932 50.9
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.6e-226 790.4 929 48.5
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 2.7e-226 789.6 936 49.7
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 6.0e-226 788.5 928 50.3
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 7.8e-226 788.1 928 49.7
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 8.7e-225 784.6 931 50.1
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 9.6e-224 781.2 917 50.1
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 2.1e-223 780.0 888 51.9
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 6.2e-223 778.5 920 48.7
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 1.1e-222 777.7 928 49.8
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 4.0e-222 775.8 946 48.8
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 5.3e-222 775.4 969 47.1
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 9.0e-222 774.6 961 47.0
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 9.9e-221 771.2 916 49.1
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 2.2e-220 770.0 919 48.0
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 2.2e-220 770.0 964 47.1
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 1.9e-216 756.9 889 50.5
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 7.4e-216 755.0 938 48.1
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 1.3e-215 754.2 938 48.2
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 4.5e-213 745.7 922 47.4
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 3.8e-212 742.7 835 50.9
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.9e-211 740.3 939 47.3
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 3.2e-211 739.6 921 47.1
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 2.3e-209 733.4 919 46.6
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.5e-208 730.7 916 46.4
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 3.3e-208 729.6 917 46.6
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 2.7e-202 709.9 937 43.8
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 3.7e-199 699.5 1031 44.0
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 5.3e-198 695.7 877 46.8
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 2.2e-188 663.7 948 41.4
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 2.8e-183 646.7 671 54.7
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 4.7e-178 629.4 954 42.2
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 1.7e-175 620.9 948 40.7
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 2.1e-170 604.0 895 40.8
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 6.1e-170 602.4 962 39.7
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-160 571.2 924 38.9
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 1.3e-159 568.2 990 37.3
Atru.chr10.106 Acer truncatum HOM05D003580 ORTHO05D004441 4.9e-151 539.7 666 48.2
Nitab4.5_0000001g0420 Nicotiana tabacum HOM05D003580 ORTHO05D004441 4.1e-150 536.6 989 38.5
Atru.chr10.124 Acer truncatum HOM05D003580 ORTHO05D004441 2.8e-146 523.9 654 47.6
Nitab4.5_0000693g0020 Nicotiana tabacum HOM05D003580 ORTHO05D004441 3.2e-142 510.4 615 48.5
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 2.9e-135 487.3 396 64.9
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.3e-127 459.1 576 44.1
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 7.1e-126 456.1 442 56.1
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 4.7e-122 443.4 990 33.1
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 4.0e-113 413.7 956 32.2
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.1e-109 401.4 971 31.8
Dinv14590 Davidia involucrata HOM05D003580 ORTHO05D004441 2.8e-106 391.0 516 46.7
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 3.3e-99 367.5 816 33.2
SGA_v2.0_scaffold1489G53965 Striga asiatica HOM05D003580 ORTHO05D004441 6.9e-89 333.2 242 76.9
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 4.3e-83 313.9 289 61.2
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.7e-74 284.3 725 31.0
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 3.8e-71 274.2 288 49.3
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 1.7e-66 258.8 244 61.5
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 6.5e-63 246.9 704 28.0
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-59 235.3 367 37.6
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.0e-52 213.0 289 39.1
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-50 205.7 394 34.3
CDE02G3888 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 2.4e-49 201.8 393 36.1
Pp3c22_14630 Physcomitrium patens HOM05D003580 ORTHO05D004441 3.2e-46 191.4 844 25.9
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.4e-44 186.0 286 37.1
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 5.0e-39 167.5 290 34.1
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.6e-39 167.2 168 47.6
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-36 159.1 155 47.7
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.9e-36 156.8 160 49.4
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.9e-36 156.8 136 52.9
SEGI_02361 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-34 152.5 334 32.6
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-34 152.5 236 36.9
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.4e-33 148.7 152 48.7
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.0e-32 145.6 198 42.4
FvH4_3g34230 Fragaria vesca HOM05D003580 ORTHO05D004441 3.9e-31 141.4 146 54.8
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-29 136.0 122 52.5
Cpa.g.sc272.6 Carica papaya HOM05D003580 ORTHO05D004441 4.9e-26 124.4 143 49.7
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-25 123.2 143 42.7
QL01p051634 Quercus lobata HOM05D003580 ORTHO05D004441 1.9e-25 122.5 293 33.8
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 9.2e-25 120.2 130 44.6
BcaNung02234 Brassica carinata HOM05D003580 ORTHO05D004441 6.0e-24 117.5 259 32.0
arahy.Tifrunner.gnm1.ann1.G7UC7Z Arachis hypogaea HOM05D003580 ORTHO05D004441 6.6e-23 114.0 146 47.3
arahy.Tifrunner.gnm1.ann1.0G6L2R Arachis hypogaea HOM05D003580 ORTHO05D004441 1.9e-22 112.5 146 46.6
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.0e-21 107.1 132 42.4
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 1.1e-20 106.7 124 43.5
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-20 105.9 103 49.5
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.1e-20 105.1 119 42.9
QL01p051611 Quercus lobata HOM05D003580 ORTHO05D004441 2.0e-19 102.4 106 52.8
CBR_g38824 Chara braunii HOM05D003580 ORTHO05D000002 1.3e-18 99.8 242 32.2
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.7e-18 99.4 112 45.5
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 5.4e-17 94.4 89 50.6
QL01p051624 Quercus lobata HOM05D003580 ORTHO05D004441 7.1e-17 94.0 100 52.0
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 7.1e-17 94.0 104 46.2
MCO16G457 Micromonas commoda HOM05D003580 ORTHO05D004441 9.2e-17 93.6 870 20.3
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 3.0e-15 88.6 66 57.6
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.6e-15 87.4 74 54.1
TPR.G7717 Trifolium pratense HOM05D003580 ORTHO05D004441 1.6e-13 82.8 85 51.8
Actinidia22485 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.1e-12 80.1 168 36.9
BcaB04g17891 Brassica carinata HOM05D003580 ORTHO05D004441 5.8e-11 74.3 69 52.2
Cre14.g628050 Chlamydomonas reinhardtii HOM05D003580 ORTHO05D004441 4.9e-10 71.2 233 26.2
PSO063G6607 Papaver somniferum HOM05D003580 ORTHO05D004441 2.4e-09 68.9 95 44.2
SGA_v2.0_scaffold88G27351 Striga asiatica HOM05D000351 ORTHO05D000250 1.3e-07 63.2 31 90.3


User provided reference genes

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