Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.8e-195 685.6 333 100.0
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.7e-111 406.8 285 70.5
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 2.4e-70 270.0 276 56.9
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 1.6e-58 230.7 258 49.6
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 2.2e-55 220.3 290 46.2
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 5.4e-54 215.7 269 48.0
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 9.2e-54 214.9 271 48.7
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.7e-52 210.7 271 46.1
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 7.3e-51 205.3 272 46.3
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.2e-50 204.5 267 44.6
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 5.2e-49 199.1 267 43.8
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 1.2e-48 198.0 267 43.4
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 9.9e-48 194.9 275 41.1
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 9.9e-48 194.9 264 43.9
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 1.7e-47 194.1 261 46.7
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 2.7e-45 186.8 267 43.8
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 7.8e-45 185.3 268 43.7
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 3.6e-42 176.4 277 40.8
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 3.8e-39 166.4 259 39.4
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 8.4e-39 165.2 268 40.7
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 3.9e-36 156.4 284 39.1
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 3.6e-34 149.8 302 37.1
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 6.9e-33 145.6 270 38.1
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 4.4e-32 142.9 256 35.9
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.4e-32 142.9 262 38.2
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 9.9e-32 141.7 269 35.3
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 2.2e-31 140.6 270 37.8
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.1e-30 138.3 274 34.3
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 1.4e-30 137.9 270 35.6
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 3.2e-30 136.7 273 34.1
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 4.2e-30 136.3 265 34.7
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 4.2e-30 136.3 268 34.7
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 4.2e-30 136.3 261 36.4
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.4e-30 136.0 267 33.7
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.4e-30 136.0 283 35.3
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.1e-29 134.0 272 33.8
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 2.7e-29 133.7 273 34.4
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 3.5e-29 133.3 275 33.5
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 4.6e-29 132.9 269 34.9
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 1.0e-28 131.7 258 34.5
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 1.3e-28 131.3 283 33.9
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 3.0e-28 130.2 142 47.9
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 8.7e-28 128.6 277 37.2
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.5e-27 127.9 257 35.0
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 2.5e-27 127.1 269 33.5
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 5.6e-27 125.9 168 44.0
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.3e-26 124.8 276 34.1
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 1.6e-26 124.4 269 36.1
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.1e-26 124.0 279 36.2
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.8e-26 123.6 263 33.8
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 3.6e-26 123.2 266 35.3
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 3.6e-26 123.2 260 33.1
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 6.2e-26 122.5 273 33.7
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 1.8e-25 120.9 175 43.4
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 2.0e-24 117.5 265 33.6
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 3.4e-24 116.7 276 31.2
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 4.5e-24 116.3 279 31.9
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 2.2e-23 114.0 262 32.1
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 4.9e-23 112.8 267 31.5
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.1e-22 111.7 269 29.4
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 1.4e-22 111.3 263 32.3
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 1.4e-22 111.3 268 30.6
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 3.2e-22 110.2 100 54.0
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 3.2e-22 110.2 269 30.9
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 7.1e-22 109.0 94 55.3
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 2.7e-21 107.1 99 54.5
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.5e-21 106.7 152 41.4
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 1.0e-20 105.1 239 34.3
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 1.8e-20 104.4 274 31.0
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 3.9e-20 103.2 264 31.8
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 6.7e-20 102.4 262 29.8
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 8.7e-20 102.1 271 29.9
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 1.1e-19 101.7 285 33.0
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.5e-19 101.3 100 50.0
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 5.6e-19 99.4 275 28.7
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 5.6e-19 99.4 85 62.4
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 1.6e-18 97.8 266 31.2
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 2.1e-18 97.4 266 30.5
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 6.2e-18 95.9 264 29.9
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.1e-17 95.1 266 29.7
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 1.5e-16 91.3 265 26.8
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 3.4e-16 90.1 270 31.1
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 3.4e-16 90.1 159 37.7
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 1.7e-15 87.8 277 26.4
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 2.9e-15 87.0 264 26.1
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 6.5e-15 85.9 262 28.2
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 7.1e-14 82.4 138 35.5
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 9.3e-14 82.0 115 41.7
Oeu006273.1 Olea europaea HOM05D007097 ORTHO05D008131 2.1e-13 80.9 143 34.3
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 2.1e-13 80.9 260 26.2
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 2.7e-13 80.5 268 28.4
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 2.7e-13 80.5 274 26.6
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 4.6e-13 79.7 101 41.6
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 7.9e-13 79.0 261 26.4
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 4.3e-11 73.2 103 38.8
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 7.4e-11 72.4 264 24.6
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 1.3e-10 71.6 136 34.6
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 1.6e-10 71.2 260 26.9
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 2.1e-10 70.9 58 53.4
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 2.1e-10 70.9 111 37.8
ECA233G1347 Erigeron canadensis HOM05D007097 ORTHO05D008131 4.8e-10 69.7 265 23.4
SEGI_18590 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 1.1e-09 68.6 100 37.0
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 1.4e-09 68.2 269 24.9
Ah.08g210060 Amaranthus hybridus HOM05D007097 ORTHO05D008131 6.9e-09 65.9 98 35.7
CBR_g27764 Chara braunii HOM05D017347 ORTHO05D008131 2.6e-08 63.9 103 35.0
Actinidia03892 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.7e-07 61.2 107 34.6
Sc20g0006720 Simmondsia chinensis HOM05D007097 ORTHO05D008131 3.8e-07 60.1 90 34.4
Nn3g18010 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.0e-07 59.7 70 47.1


User provided reference genes

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