Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 5.0e-105 384.4 189 100.0
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 5.8e-61 238.0 198 61.6
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 1.3e-57 226.9 189 64.6
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 2.3e-57 226.1 201 60.7
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 8.6e-57 224.2 241 51.9
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 5.6e-56 221.5 198 58.6
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 5.6e-56 221.5 201 59.2
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 2.8e-55 219.2 196 58.7
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 6.2e-55 218.0 196 58.2
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 8.1e-55 217.6 196 58.2
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 1.4e-54 216.9 200 60.0
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 4.0e-54 215.3 195 59.0
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 5.2e-54 214.9 195 56.9
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 7.5e-53 211.1 205 59.0
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 3.7e-52 208.8 193 56.5
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 4.9e-52 208.4 196 56.1
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 1.1e-51 207.2 203 54.2
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.9e-51 206.5 196 56.1
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 4.1e-51 205.3 191 55.5
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 5.4e-51 204.9 194 55.2
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 5.4e-51 204.9 189 55.6
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 5.4e-51 204.9 200 57.0
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 2.1e-50 203.0 196 55.6
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 4.6e-50 201.8 190 55.3
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 4.6e-50 201.8 197 56.9
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 1.0e-49 200.7 200 56.0
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 1.7e-49 199.9 193 53.4
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 1.7e-49 199.9 200 55.5
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 3.0e-49 199.1 194 53.6
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 3.0e-49 199.1 195 51.8
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 3.9e-49 198.7 171 60.2
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 3.9e-49 198.7 203 53.2
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 1.1e-48 197.2 194 54.1
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 1.5e-48 196.8 201 51.7
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 1.9e-48 196.4 194 53.1
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 3.3e-48 195.7 195 53.8
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 4.3e-48 195.3 199 54.8
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 7.3e-48 194.5 193 58.0
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 9.5e-48 194.1 198 55.1
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 1.2e-47 193.7 195 53.8
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 1.6e-47 193.4 190 53.2
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 2.1e-47 193.0 198 53.0
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 2.1e-47 193.0 212 51.4
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 3.6e-47 192.2 190 54.7
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 6.2e-47 191.4 194 53.6
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 8.1e-47 191.0 161 59.6
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 2.4e-46 189.5 191 52.9
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 2.4e-46 189.5 192 54.7
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 4.0e-46 188.7 194 52.6
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 5.2e-46 188.3 194 52.1
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 5.2e-46 188.3 202 53.5
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 6.8e-46 188.0 200 51.5
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 8.9e-46 187.6 198 52.0
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 1.2e-45 187.2 203 51.2
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 2.0e-45 186.4 191 51.8
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 2.6e-45 186.0 193 50.3
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 7.6e-45 184.5 191 51.3
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 1.7e-44 183.3 203 52.7
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 3.8e-44 182.2 191 52.4
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 3.8e-44 182.2 174 53.4
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 4.9e-44 181.8 196 49.0
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 8.4e-44 181.0 199 47.7
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 8.4e-44 181.0 197 51.8
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 1.9e-43 179.9 227 48.5
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 1.9e-43 179.9 191 51.8
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 4.2e-43 178.7 205 47.8
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 5.4e-43 178.3 195 49.2
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 7.1e-43 177.9 190 51.6
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 1.2e-42 177.2 193 50.8
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 2.1e-42 176.4 203 48.3
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 4.6e-42 175.3 198 47.5
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 1.3e-41 173.7 207 48.3
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 1.3e-41 173.7 207 48.3
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 1.3e-41 173.7 199 48.7
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 1.1e-40 170.6 193 48.7
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 1.5e-40 170.2 192 50.5
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 2.5e-40 169.5 169 53.8
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 1.2e-39 167.2 196 49.5
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 2.1e-39 166.4 200 48.5
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 6.2e-39 164.9 204 47.1
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 6.2e-39 164.9 193 49.2
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 8.1e-39 164.5 201 47.3
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 1.8e-38 163.3 204 47.5
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 6.9e-38 161.4 204 46.1
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 6.9e-38 161.4 204 46.6
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 1.2e-37 160.6 204 46.1
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 1.5e-37 160.2 287 38.3
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 2.0e-37 159.8 204 46.6
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 2.0e-37 159.8 199 47.7
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 2.6e-37 159.5 187 48.7
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 3.4e-37 159.1 204 45.6
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 9.9e-37 157.5 208 43.8
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 2.9e-36 156.0 195 45.6
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 3.8e-36 155.6 199 49.7
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 8.4e-36 154.5 205 46.3
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 1.4e-35 153.7 194 45.9
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 1.4e-35 153.7 194 45.9
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 1.4e-35 153.7 149 52.3
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 1.9e-35 153.3 153 50.3
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 7.1e-35 151.4 195 46.2
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 2.1e-34 149.8 198 43.9
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 3.5e-34 149.1 197 46.2
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 6.0e-34 148.3 201 45.8
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 7.8e-34 147.9 197 46.2
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 7.8e-34 147.9 180 45.0
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 7.8e-34 147.9 165 49.7
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 3.9e-33 145.6 199 43.7
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 8.7e-33 144.4 201 45.3
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 2.5e-32 142.9 201 46.3
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 1.7e-28 130.2 130 54.6
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 1.4e-27 127.1 158 47.5
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 6.0e-26 121.7 125 53.6
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 2.2e-20 103.2 83 59.0
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 1.5e-16 90.5 134 40.3
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 1.3e-12 77.4 74 55.4
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 1.4e-11 73.9 69 53.6
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 3.0e-09 66.2 65 49.2
AagrBONN_evm.TU.Sc2ySwM_369.455 Anthoceros agrestis HOM05D006703 ORTHO05D008389 8.7e-09 64.7 115 32.2
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 1.1e-08 64.3 50 60.0
Glyma.19G201366 Glycine max HOM05D006703 ORTHO05D008389 2.5e-08 63.2 122 35.2
Pp3c9_17430 Physcomitrium patens HOM05D006703 ORTHO05D008389 2.4e-06 56.6 75 41.3


User provided reference genes

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