Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 5.8e-161 570.9 290 100.0
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 7.9e-102 374.4 285 71.9
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 2.2e-96 356.3 284 70.4
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.2e-70 270.8 231 65.8
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 3.4e-68 262.7 311 51.1
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.4e-66 257.3 287 52.3
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 7.0e-66 255.0 299 50.2
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 9.1e-66 254.6 290 51.7
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-65 254.2 296 52.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 1.6e-65 253.8 296 52.0
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.5e-65 252.7 314 48.7
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.5e-65 252.3 330 47.3
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 5.0e-64 248.8 304 50.0
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 5.0e-64 248.8 312 47.8
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 5.0e-64 248.8 332 47.9
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.5e-63 247.3 316 48.1
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.5e-63 247.3 321 46.4
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.5e-63 247.3 310 48.4
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.9e-63 246.9 315 48.6
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.7e-62 242.3 317 47.3
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 8.0e-62 241.5 308 47.4
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.0e-61 241.1 309 47.2
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.4e-61 240.7 320 46.2
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 4.0e-61 239.2 294 50.0
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 4.0e-61 239.2 324 45.1
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 4.0e-61 239.2 338 47.0
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 5.2e-61 238.8 308 48.1
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 2.6e-60 236.5 324 46.3
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 3.4e-60 236.1 324 46.3
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 4.4e-60 235.7 299 49.2
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 4.4e-60 235.7 314 45.5
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 7.5e-60 235.0 313 46.3
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 9.8e-60 234.6 303 46.9
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 1.3e-59 234.2 312 45.8
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 6.3e-59 231.9 323 46.1
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 6.3e-59 231.9 292 49.0
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 8.3e-59 231.5 327 45.0
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 8.3e-59 231.5 295 47.5
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 1.8e-58 230.3 293 47.4
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 3.1e-58 229.6 323 45.2
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 5.4e-58 228.8 276 49.3
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.3e-56 224.2 329 44.1
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 1.3e-56 224.2 383 39.7
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 1.3e-56 224.2 307 46.9
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 2.9e-56 223.0 333 42.3
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 4.3e-55 219.2 374 40.6
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 5.6e-55 218.8 314 42.0
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 7.3e-55 218.4 323 42.1
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 9.5e-55 218.0 285 48.1
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 1.6e-54 217.2 323 41.5
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 2.1e-54 216.9 312 42.9
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.1e-54 216.9 332 42.5
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.1e-54 216.9 260 50.8
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 3.6e-54 216.1 298 45.6
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 3.6e-54 216.1 309 44.7
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 3.6e-54 216.1 335 41.2
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 4.7e-54 215.7 312 42.9
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 8.0e-54 214.9 312 42.0
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 3.0e-53 213.0 304 43.4
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 5.2e-53 212.2 312 42.0
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 5.2e-53 212.2 373 38.6
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 8.9e-53 211.5 320 42.2
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 8.9e-53 211.5 326 41.1
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 2.0e-52 210.3 293 44.0
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 5.7e-52 208.8 284 44.7
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 1.4e-50 204.1 284 44.4
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.4e-50 204.1 254 49.2
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 9.2e-50 201.4 291 43.3
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 1.6e-49 200.7 273 46.5
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 3.0e-48 196.4 311 40.8
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 8.6e-48 194.9 286 41.3
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 4.7e-46 189.1 259 46.3
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 8.0e-46 188.3 233 49.4
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.4e-45 187.6 316 39.2
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 8.9e-45 184.9 278 42.8
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 3.4e-44 183.0 253 45.5
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 3.4e-44 183.0 234 46.6
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 7.5e-44 181.8 293 39.2
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 4.9e-43 179.1 189 54.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 4.1e-42 176.0 268 43.3
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 4.6e-41 172.6 353 34.3
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 4.6e-41 172.6 271 42.4
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 6.6e-40 168.7 306 38.6
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 6.6e-40 168.7 174 54.6
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 5.6e-39 165.6 306 37.9
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 2.8e-38 163.3 251 42.2
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.2e-35 153.7 167 55.1
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.2e-35 153.7 177 52.0
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.5e-31 141.0 234 41.9
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.6e-30 137.5 359 27.9
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 8.9e-29 131.7 97 61.9
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 1.7e-27 127.5 168 47.6
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 1.6e-25 120.9 181 44.2
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 8.6e-24 115.2 87 62.1
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 1.1e-21 108.2 248 33.1
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 4.0e-21 106.3 78 65.4
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.7e-17 93.6 161 40.4
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 5.1e-16 89.4 338 24.0
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 3.6e-14 83.2 87 55.2
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.1e-13 81.6 126 39.7
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.1e-13 80.1 73 57.5
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 5.8e-12 75.9 327 25.7
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 5.8e-12 75.9 68 54.4
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.4e-10 70.5 63 52.4
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.6e-09 67.8 61 59.0
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 4.6e-09 66.2 45 66.7
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 3.0e-08 63.5 41 75.6
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 2.1e-06 57.4 403 21.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.8e-06 57.0 60 50.0


User provided reference genes

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