Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 5.1e-85 317.8 167 100.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.3e-77 293.1 167 91.0
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.8e-75 285.4 167 89.2
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 4.7e-75 284.6 166 88.6
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 4.0e-74 281.6 166 88.6
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 3.8e-72 275.0 166 85.5
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.1e-71 273.5 168 83.3
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.4e-71 273.1 160 86.2
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.4e-71 272.3 163 84.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 1.6e-70 269.6 167 81.4
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.1e-70 269.2 163 82.8
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 2.1e-70 269.2 167 81.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 2.7e-70 268.9 164 82.9
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 2.7e-70 268.9 164 82.9
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 2.7e-70 268.9 167 81.4
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 2.7e-70 268.9 166 80.7
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.7e-70 268.9 151 92.1
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 3.5e-70 268.5 159 85.5
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 6.0e-70 267.7 166 81.3
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 6.0e-70 267.7 168 80.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 6.0e-70 267.7 162 86.4
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 7.8e-70 267.3 164 81.7
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 7.8e-70 267.3 165 81.2
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.0e-69 266.9 166 80.1
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.0e-69 266.9 166 80.1
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 1.0e-69 266.9 166 81.3
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 1.7e-69 266.2 164 80.5
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.7e-69 266.2 154 87.0
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 1.7e-69 266.2 159 84.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 2.3e-69 265.8 168 81.0
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.9e-69 265.0 164 82.9
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 5.1e-69 264.6 154 85.1
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.1e-69 264.6 154 85.1
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-68 263.5 166 78.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.1e-68 263.5 168 79.2
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 1.1e-68 263.5 166 80.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.5e-68 263.1 154 84.4
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 164 81.1
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 1.5e-68 263.1 167 80.2
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.9e-68 262.7 166 82.5
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.5e-68 262.3 166 79.5
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 3.3e-68 261.9 164 81.1
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 3.3e-68 261.9 166 80.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 4.3e-68 261.5 164 79.9
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 5.6e-68 261.2 164 79.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.6e-68 260.4 158 84.2
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.6e-67 259.6 156 82.7
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-67 259.6 161 81.4
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.6e-67 259.6 161 81.4
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.6e-67 259.6 157 81.5
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.1e-67 259.2 157 80.9
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.8e-67 258.8 167 80.8
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.8e-67 258.8 160 82.5
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.8e-67 258.8 166 77.7
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 3.6e-67 258.5 161 78.9
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 3.6e-67 258.5 166 80.1
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 3.6e-67 258.5 167 81.4
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.8e-67 258.1 161 80.7
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 4.8e-67 258.1 160 83.1
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 4.8e-67 258.1 160 83.1
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 6.2e-67 257.7 168 78.0
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.1e-66 256.9 157 80.3
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 1.8e-66 256.1 160 81.2
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 2.4e-66 255.8 166 77.7
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 2.4e-66 255.8 165 77.6
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 3.1e-66 255.4 157 82.8
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 3.1e-66 255.4 157 82.8
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 3.1e-66 255.4 157 82.8
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 4.0e-66 255.0 164 78.7
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 4.0e-66 255.0 153 81.0
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.0e-66 255.0 157 82.2
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.9e-66 254.2 165 78.8
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 6.9e-66 254.2 165 78.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 6.9e-66 254.2 154 83.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.2e-65 253.4 166 78.9
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 1.2e-65 253.4 174 74.1
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 1.5e-65 253.1 159 79.9
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.0e-65 252.7 165 77.6
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.0e-65 252.7 165 77.6
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.6e-65 252.3 165 77.6
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 5.8e-65 251.1 166 79.5
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 7.6e-65 250.8 151 81.5
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.9e-65 250.4 165 77.6
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.3e-64 250.0 166 75.3
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.3e-64 250.0 153 82.4
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 2.9e-64 248.8 157 79.6
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.8e-64 248.4 167 74.3
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.8e-64 248.4 166 76.5
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 1.1e-63 246.9 167 75.4
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.4e-63 245.7 153 77.8
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 2.4e-63 245.7 153 80.4
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 5.4e-63 244.6 157 77.1
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.6e-62 241.5 154 77.3
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 4.6e-62 241.5 147 81.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 4.6e-62 241.5 147 84.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 6.0e-62 241.1 140 85.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 5.1e-61 238.0 153 77.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 1.9e-60 236.1 154 77.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.6e-60 234.6 142 81.7
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 2.1e-59 232.6 153 76.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 3.7e-59 231.9 164 72.6
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 6.2e-59 231.1 153 76.5
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.4e-58 229.9 153 75.2
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.8e-58 229.6 143 80.4
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 7.6e-57 224.2 164 67.7
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 1.2e-54 216.9 153 72.5
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 6.0e-54 214.5 137 75.2
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 6.0e-54 214.5 134 80.6
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 8.7e-53 210.7 152 70.4
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 6.2e-51 204.5 131 76.3
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.4e-50 203.4 162 64.8
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.8e-50 203.0 153 64.7
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 4.5e-49 198.4 154 66.2
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.3e-48 196.8 118 83.1
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.3e-48 196.8 120 80.8
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.5e-48 194.5 129 78.3
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.2e-46 190.3 121 81.0
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 5.1e-45 184.9 108 85.2
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.9e-44 183.0 152 59.9
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.9e-44 183.0 107 83.2
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 5.7e-44 181.4 107 84.1
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.7e-44 180.6 129 74.4
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 3.7e-43 178.7 131 67.2
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 9.1e-34 147.5 91 80.2
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 1.8e-29 133.3 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.0e-17 93.2 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 4.1e-10 68.9 119 44.5


User provided reference genes

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