Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 2.4e-132 476.1 360 100.0
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 8.7e-74 281.6 368 69.8
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 8.1e-72 275.0 322 74.5
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 8.1e-72 275.0 343 72.0
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.1e-71 273.1 322 68.9
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 9.0e-71 271.6 365 68.5
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 9.0e-71 271.6 362 68.8
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 2.0e-70 270.4 362 69.3
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.4e-70 269.2 365 63.0
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 6.4e-69 265.4 317 74.1
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 6.0e-67 258.8 362 65.2
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 7.9e-67 258.5 339 71.4
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 2.5e-65 253.4 363 66.1
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 3.6e-64 249.6 331 59.5
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 2.1e-59 233.8 329 68.1
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 2.1e-59 233.8 329 68.1
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 3.5e-59 233.0 310 65.8
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 4.6e-59 232.6 366 68.9
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 2.3e-58 230.3 328 65.9
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 5.1e-58 229.2 320 68.1
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 8.7e-58 228.4 368 62.0
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 2.5e-57 226.9 343 66.8
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 7.4e-57 225.3 322 59.9
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 7.4e-57 225.3 365 60.3
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 9.6e-57 224.9 377 59.9
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 9.6e-57 224.9 322 65.2
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 1.3e-56 224.6 337 62.9
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.1e-56 223.8 339 66.1
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 2.1e-56 223.8 321 59.2
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 2.1e-56 223.8 322 66.8
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 1.1e-55 221.5 361 60.4
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.1e-55 221.5 321 63.2
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 2.4e-55 220.3 376 63.3
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 1.2e-54 218.0 366 59.6
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.6e-54 216.9 336 65.8
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 7.6e-54 215.3 347 62.2
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 1.3e-53 214.5 324 64.2
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 1.3e-53 214.5 324 64.2
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 1.3e-53 214.5 324 64.2
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 1.3e-53 214.5 324 64.2
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 4.9e-53 212.6 328 63.1
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 1.4e-52 211.1 328 63.4
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 1.4e-52 211.1 324 63.3
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 1.9e-52 210.7 327 62.7
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 2.5e-52 210.3 325 66.2
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 4.2e-52 209.5 324 63.3
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 1.2e-51 208.0 363 56.7
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 1.6e-51 207.6 367 58.3
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.7e-51 206.8 352 59.9
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 7.9e-51 205.3 344 57.3
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 1.3e-50 204.5 369 46.6
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 2.3e-50 203.8 370 56.5
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 6.7e-50 202.2 318 57.5
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 6.7e-50 202.2 363 57.6
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 6.7e-50 202.2 363 60.6
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 1.1e-49 201.4 364 57.4
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.5e-49 201.1 325 61.5
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 4.3e-49 199.5 364 60.4
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 9.6e-49 198.4 337 58.8
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 9.6e-49 198.4 331 62.8
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.3e-48 198.0 353 56.9
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.3e-48 198.0 287 69.0
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 2.1e-48 197.2 326 63.2
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 2.8e-48 196.8 328 54.6
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 6.3e-48 195.7 310 63.9
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 8.2e-48 195.3 366 59.8
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 8.2e-48 195.3 360 59.4
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 4.1e-47 193.0 331 59.2
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 4.1e-47 193.0 331 59.2
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 9.0e-47 191.8 316 63.0
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 9.0e-47 191.8 367 58.9
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 9.0e-47 191.8 316 62.7
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 2.0e-46 190.7 313 67.7
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 3.4e-46 189.9 362 57.5
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 3.4e-46 189.9 324 61.4
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 4.5e-46 189.5 362 57.5
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 5.0e-45 186.0 317 66.9
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 3.2e-44 183.3 318 62.3
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 3.2e-44 183.3 352 59.4
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 5.5e-44 182.6 332 62.0
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 7.2e-44 182.2 327 59.0
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 7.2e-44 182.2 299 60.9
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 9.3e-44 181.8 339 49.3
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 1.6e-43 181.0 312 64.7
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 3.5e-43 179.9 378 52.1
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 4.6e-43 179.5 322 60.2
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 7.9e-43 178.7 326 57.1
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.0e-42 178.3 309 44.7
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.0e-42 178.3 360 56.4
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 2.3e-42 177.2 329 53.5
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 3.9e-42 176.4 350 59.4
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 6.7e-42 175.6 326 62.0
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 6.7e-42 175.6 314 60.5
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 1.9e-41 174.1 340 59.1
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 2.5e-41 173.7 337 50.7
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 4.3e-41 172.9 348 45.1
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 4.3e-41 172.9 327 59.3
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 2.8e-40 170.2 381 53.3
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 4.8e-40 169.5 332 55.7
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 6.3e-40 169.1 253 63.6
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 6.3e-40 169.1 253 63.6
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 1.1e-39 168.3 335 50.4
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 1.1e-39 168.3 347 52.2
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.1e-39 168.3 314 60.5
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 1.8e-39 167.5 365 55.6
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.8e-39 167.5 336 56.5
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 2.6e-38 163.7 253 62.8
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 3.4e-38 163.3 328 55.5
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 3.4e-38 163.3 313 58.8
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 5.9e-38 162.5 295 60.0
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 5.9e-38 162.5 380 53.4
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 5.9e-38 162.5 390 41.3
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 1.0e-37 161.8 295 60.0
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 2.2e-37 160.6 324 56.8
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 2.9e-37 160.2 355 56.3
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 6.5e-37 159.1 334 63.8
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 8.5e-37 158.7 377 54.6
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 1.1e-36 158.3 362 58.6
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.4e-36 157.9 324 58.0
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 2.5e-36 157.1 362 58.3
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 3.2e-36 156.8 325 45.8
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 5.5e-36 156.0 300 58.7
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 1.2e-35 154.8 285 59.3
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 2.1e-35 154.1 339 49.6
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 2.1e-35 154.1 365 44.1
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 1.0e-34 151.8 359 56.0
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.0e-34 151.8 378 52.4
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 1.8e-34 151.0 327 54.4
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 3.9e-34 149.8 307 60.6
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 8.8e-34 148.7 327 53.2
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 8.8e-34 148.7 318 57.2
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.1e-33 148.3 328 50.0
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 1.1e-33 148.3 318 56.9
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 2.0e-33 147.5 371 51.5
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 3.3e-33 146.7 334 56.6
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 3.3e-33 146.7 334 56.6
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 7.4e-33 145.6 328 56.4
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 9.7e-33 145.2 205 67.8
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 2.8e-32 143.7 331 54.1
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 2.8e-32 143.7 269 55.4
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 8.2e-32 142.1 352 54.3
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 1.4e-31 141.4 353 51.6
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 1.8e-31 141.0 334 56.0
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 4.1e-31 139.8 334 55.1
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 9.1e-31 138.7 349 53.0
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 9.1e-31 138.7 358 53.4
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.6e-30 137.1 327 46.5
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 3.4e-30 136.7 321 55.8
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 4.5e-30 136.3 244 67.6
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 7.7e-30 135.6 320 55.0
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 7.7e-30 135.6 361 52.9
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 1.7e-29 134.4 318 58.2
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 8.5e-29 132.1 318 55.3
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 1.1e-28 131.7 322 54.7
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 2.5e-28 130.6 327 51.4
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 2.5e-28 130.6 258 67.1
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 3.2e-28 130.2 319 57.4
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 5.5e-28 129.4 334 55.7
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 9.4e-28 128.6 363 51.0
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 4.7e-27 126.3 147 57.8
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 1.4e-26 124.8 367 49.9
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 3.0e-26 123.6 359 51.3
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 6.7e-26 122.5 325 52.0
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 8.8e-26 122.1 335 51.3
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 2.6e-25 120.6 338 53.6
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 2.2e-24 117.5 346 53.2
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 9.1e-23 112.1 320 49.1
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 9.1e-23 112.1 302 57.0
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 1.0e-21 108.6 104 51.9
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.3e-21 108.2 335 49.3
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 2.2e-21 107.5 147 55.8
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 3.8e-21 106.7 213 49.8
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 8.5e-21 105.5 208 46.6
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 3.2e-20 103.6 80 70.0
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 2.1e-19 100.9 209 46.4
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 2.7e-19 100.5 329 46.2
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 1.8e-18 97.8 363 47.7
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 1.8e-18 97.8 363 47.7
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 1.8e-18 97.8 363 47.7
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 6.7e-18 95.9 196 53.1
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 3.3e-17 93.6 279 52.7
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 2.2e-16 90.9 80 53.8
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 3.5e-14 83.6 260 58.8
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 4.2e-12 76.6 108 47.2
SEGI_15755 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 1.6e-11 74.7 321 55.5
SEGI_36064 Sequoiadendron giganteum HOM05D003453 ORTHO05D004154 3.0e-10 70.5 146 64.4
BraA07t29361Z Brassica rapa HOM05D003453 ORTHO05D042392 4.5e-06 56.6 66 47.0


User provided reference genes

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