Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12662 Striga asiatica HOM05D008307 ORTHO05D010374 0.0e+00 1901.7 964 100.0
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 4.2e-83 313.9 626 37.2
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 1.7e-52 212.2 505 33.5
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 3.6e-50 204.5 303 41.3
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 6.1e-50 203.8 300 42.0
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 8.0e-50 203.4 319 40.4
DCAR_027325 Daucus carota HOM05D008307 ORTHO05D010374 1.3e-47 196.1 324 38.3
DCAR_024261 Daucus carota HOM05D008307 ORTHO05D010374 1.9e-46 192.2 306 36.3
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 9.2e-46 189.9 300 39.3
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 2.7e-45 188.3 306 34.6
PGSC0003DMG400017215 Solanum tuberosum HOM05D008307 ORTHO05D010374 6.0e-45 187.2 320 35.6
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 7.8e-45 186.8 308 38.6
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 1.7e-44 185.7 308 37.3
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 2.3e-44 185.3 320 35.9
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 3.0e-44 184.9 292 39.4
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 3.0e-44 184.9 384 35.4
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 1.1e-43 183.0 457 31.9
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 7.3e-43 180.3 332 38.0
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 7.3e-43 180.3 320 35.6
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 4.7e-42 177.6 387 33.1
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 1.4e-41 176.0 318 37.7
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 6.8e-41 173.7 329 35.6
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.5e-40 172.6 289 37.0
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 1.3e-39 169.5 374 33.2
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 1.3e-39 169.5 323 34.1
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.3e-39 169.5 483 31.1
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 1.7e-39 169.1 361 33.0
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 2.9e-39 168.3 361 33.0
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 4.9e-39 167.5 362 33.1
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 6.4e-39 167.2 284 37.7
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 8.3e-39 166.8 362 32.9
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 1.1e-38 166.4 215 47.4
CAN.G220.11 Capsicum annuum HOM05D008307 ORTHO05D010374 7.0e-38 163.7 298 34.6
Nitab4.5_0007280g0010 Nicotiana tabacum HOM05D008307 ORTHO05D010374 7.0e-38 163.7 302 35.8
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 2.7e-37 161.8 312 33.0
AT3G23370 Arabidopsis thaliana HOM05D008307 ORTHO05D010374 6.0e-37 160.6 546 28.8
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 6.0e-37 160.6 306 35.9
FAN17G2370 Fragaria x ananassa HOM05D000478 ORTHO05D010374 1.7e-36 159.1 253 41.9
Carub.0003s2363 Capsella rubella HOM05D008307 ORTHO05D010374 4.0e-33 147.9 232 37.9
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 4.0e-33 147.9 210 38.6
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 7.5e-32 143.7 421 30.6
COL.COLO4_15896 Corchorus olitorius HOM05D008307 ORTHO05D010374 1.1e-30 139.8 264 37.1
FAN12G4262 Fragaria x ananassa HOM05D000478 ORTHO05D010374 8.6e-28 130.2 177 45.8
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 9.5e-27 126.7 447 27.1
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 2.4e-25 122.1 301 30.2
Cc03_g05700 Coffea canephora HOM05D008307 ORTHO05D010374 4.6e-21 107.8 167 39.5
Thecc.04G258000 Theobroma cacao HOM05D008307 ORTHO05D010374 1.9e-19 102.4 215 34.4
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 5.8e-16 90.9 223 32.7
Cc03_g05710 Coffea canephora HOM05D008307 ORTHO05D010374 1.7e-15 89.4 151 36.4
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.4e-06 59.7 142 30.3
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 9.3e-06 57.0 115 34.8


User provided reference genes

Program Settings