Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12657 Striga asiatica HOM05D032302 ORTHO05D400554 2.5e-62 241.9 120 100.0
SGA_v2.0_scaffold191G40456 Striga asiatica HOM05D032302 ORTHO05D012909 1.5e-22 109.8 61 90.2
SGA_v2.0_scaffold5G03071 Striga asiatica HOM05D032302 ORTHO05D405004 2.0e-14 82.8 43 95.3
SGA_v2.0_scaffold31G12659 Striga asiatica HOM05D000718 ORTHO05D003905 2.6e-14 82.4 42 88.1
PGR031G3118 Punica granatum HOM05D000718 ORTHO05D003905 1.9e-09 66.2 40 72.5
Eucgr.F04473 Eucalyptus grandis HOM05D000718 ORTHO05D003905 4.2e-09 65.1 35 82.9
FvH4_3g18320 Fragaria vesca HOM05D000718 ORTHO05D003905 7.2e-09 64.3 34 79.4
FAN11G1179 Fragaria x ananassa HOM05D000718 ORTHO05D003905 7.2e-09 64.3 34 79.4
FAN16G0238 Fragaria x ananassa HOM05D000718 ORTHO05D003905 7.2e-09 64.3 34 79.4
FAN25G1976 Fragaria x ananassa HOM05D000718 ORTHO05D003905 7.2e-09 64.3 34 79.4
FAN25G3621 Fragaria x ananassa HOM05D000718 ORTHO05D003905 7.2e-09 64.3 34 79.4
Cc05_g11100 Coffea canephora HOM05D000718 ORTHO05D003905 9.5e-09 63.9 34 79.4
Lj8A148G36 Lonicera japonica HOM05D000718 ORTHO05D003905 1.2e-08 63.5 34 79.4
HPP92_024044 Vanilla planifolia HOM05D000718 ORTHO05D003905 1.6e-08 63.2 36 77.8
CSS0038708 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D003905 2.1e-08 62.8 39 66.7
Nitab4.5_0000035g0180 Nicotiana tabacum HOM05D000718 ORTHO05D003905 2.1e-08 62.8 34 79.4
Nitab4.5_0021759g0010 Nicotiana tabacum HOM05D000718 ORTHO05D003905 2.1e-08 62.8 34 79.4
Peaxi162Scf00111g01413 Petunia axillaris HOM05D000718 ORTHO05D003905 2.1e-08 62.8 53 54.7
FAN21G0298 Fragaria x ananassa HOM05D000718 ORTHO05D003905 2.8e-08 62.4 39 71.8
Peaxi162Scf00692g00513 Petunia axillaris HOM05D000718 ORTHO05D003905 2.8e-08 62.4 54 55.6
Thecc.07G111200 Theobroma cacao HOM05D000718 ORTHO05D003905 2.8e-08 62.4 34 76.5
Oeu031031.1 Olea europaea HOM05D000718 ORTHO05D003905 3.6e-08 62.0 36 72.2
Eucgr.F03269 Eucalyptus grandis HOM05D000718 ORTHO05D003905 4.7e-08 61.6 35 71.4
Sed0022037 Sechium edule HOM05D000718 ORTHO05D003905 4.7e-08 61.6 35 77.1
CiPaw.11G160500 Carya illinoinensis HOM05D000718 ORTHO05D003905 6.1e-08 61.2 35 71.4
Ciclev10023870m.g Citrus clementina HOM05D000718 ORTHO05D003905 6.1e-08 61.2 35 74.3
FvH4_3g18311 Fragaria vesca HOM05D000718 ORTHO05D003905 6.1e-08 61.2 34 76.5
Lj3g0017131 Lotus japonicus HOM05D000718 ORTHO05D003905 6.1e-08 61.2 34 79.4
RcHm_v2.0_Chr5g0030961 Rosa chinensis HOM05D000718 ORTHO05D003905 6.1e-08 61.2 34 76.5
Sc16g0007560 Simmondsia chinensis HOM05D000718 ORTHO05D003905 6.1e-08 61.2 35 71.4
Eucgr.F03273 Eucalyptus grandis HOM05D000718 ORTHO05D003905 8.0e-08 60.8 35 77.1
Lalb_Chr19g0133791 Lupinus albus HOM05D000718 ORTHO05D003905 1.0e-07 60.5 35 74.3
SGA_v2.0_scaffold47G17801 Striga asiatica HOM05D000718 ORTHO05D003905 1.0e-07 60.5 34 73.5
vmacro09493 Vaccinium macrocarpon HOM05D000718 ORTHO05D003905 1.0e-07 60.5 69 42.0
GSVIVG01014200001 Vitis vinifera HOM05D000718 ORTHO05D002712 1.0e-07 60.5 35 74.3
Atru.chr2.2149 Acer truncatum HOM05D000718 ORTHO05D003905 1.4e-07 60.1 38 65.8
Dinv14993 Davidia involucrata HOM05D000718 ORTHO05D003905 1.4e-07 60.1 34 70.6
Duzib213G0325 Durio zibethinus HOM05D000718 ORTHO05D003905 1.4e-07 60.1 38 68.4
Glyma.06G228800 Glycine max HOM05D000718 ORTHO05D003905 1.4e-07 60.1 38 65.8
Nitab4.5_0006953g0030 Nicotiana tabacum HOM05D000718 ORTHO05D003905 1.4e-07 60.1 34 73.5
PGSC0003DMG400007072 Solanum tuberosum HOM05D000718 ORTHO05D003905 1.4e-07 60.1 39 66.7
MSTRG.14962 Avicennia marina HOM05D000718 ORTHO05D003905 1.8e-07 59.7 31 77.4
CSS0040392 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D003905 1.8e-07 59.7 32 75.0
Dinv18363 Davidia involucrata HOM05D000718 ORTHO05D003905 1.8e-07 59.7 34 70.6
Lj3g0020389 Lotus japonicus HOM05D000718 ORTHO05D003905 1.8e-07 59.7 34 76.5
TAR624G0221 Trochodendron aralioides HOM05D000718 ORTHO05D003905 1.8e-07 59.7 34 70.6
MSTRG.6676 Avicennia marina HOM05D000718 ORTHO05D003905 2.3e-07 59.3 31 80.6
CiPaw.12G113500 Carya illinoinensis HOM05D000718 ORTHO05D003905 2.3e-07 59.3 43 60.5
Haze_09325 Corylus avellana HOM05D000718 ORTHO05D003905 2.3e-07 59.3 34 70.6
Eucgr.F03272 Eucalyptus grandis HOM05D000718 ORTHO05D003905 2.3e-07 59.3 35 74.3
Nitab4.5_0003565g0030 Nicotiana tabacum HOM05D000718 ORTHO05D003905 2.3e-07 59.3 34 73.5
Rhsim04G0026400 Rhododendron simsii HOM05D000718 ORTHO05D003905 2.3e-07 59.3 67 43.3
RcHm_v2.0_Chr5g0030971 Rosa chinensis HOM05D000718 ORTHO05D003905 2.3e-07 59.3 33 75.8
Solyc12g014270.3 Solanum lycopersicum HOM05D000718 ORTHO05D003905 3.0e-07 58.9 32 75.0
SGA_v2.0_scaffold70G23378 Striga asiatica HOM05D000718 ORTHO05D003905 3.0e-07 58.9 34 70.6
Migut.M00729 Erythranthe guttata HOM05D000718 ORTHO05D003905 4.0e-07 58.5 34 70.6
Rhsim06G0207700 Rhododendron simsii HOM05D000718 ORTHO05D003905 4.0e-07 58.5 34 73.5
Actinidia18800 Actinidia chinensis HOM05D000718 ORTHO05D003905 5.2e-07 58.2 42 61.9
Glyma.12G157500 Glycine max HOM05D000718 ORTHO05D003905 5.2e-07 58.2 34 67.6
Psat6g010080 Pisum sativum HOM05D000718 ORTHO05D003905 5.2e-07 58.2 35 68.6
CANSAT35G0358 Cannabis sativa HOM05D000718 ORTHO05D003905 6.8e-07 57.8 31 77.4
Psat6g010000 Pisum sativum HOM05D000718 ORTHO05D003905 6.8e-07 57.8 35 68.6
TPR.G30481 Trifolium pratense HOM05D000718 ORTHO05D003905 6.8e-07 57.8 35 68.6
vmacro09494 Vaccinium macrocarpon HOM05D000718 ORTHO05D003905 6.8e-07 57.8 34 70.6
FAN21G2233 Fragaria x ananassa HOM05D000718 ORTHO05D003905 8.9e-07 57.4 54 53.7
Nn1g04431 Nelumbo nucifera HOM05D000718 ORTHO05D003905 1.2e-06 57.0 35 71.4
Nn1g09180 Nelumbo nucifera HOM05D000718 ORTHO05D003905 1.2e-06 57.0 35 65.7
Sabra11G0097100 Salix brachista HOM05D000718 ORTHO05D003905 1.2e-06 57.0 34 70.6
Sopen12g006060 Solanum pennellii HOM05D000718 ORTHO05D003905 1.2e-06 57.0 32 71.9
Gohir.A13G149401 Gossypium hirsutum HOM05D000718 ORTHO05D003905 1.5e-06 56.6 34 70.6
Gohir.D13G153900 Gossypium hirsutum HOM05D000718 ORTHO05D003905 1.5e-06 56.6 34 70.6
MD03G1242900 Malus domestica HOM05D000718 ORTHO05D003905 1.5e-06 56.6 67 40.3
QL02p094741 Quercus lobata HOM05D000718 ORTHO05D003905 1.5e-06 56.6 34 67.6
QL04p083602 Quercus lobata HOM05D000718 ORTHO05D003905 1.5e-06 56.6 34 67.6
TAR627G0128 Trochodendron aralioides HOM05D000718 ORTHO05D003905 1.5e-06 56.6 54 51.9
MELO3C025638.2 Cucumis melo HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 70.6
Migut.H01996 Erythranthe guttata HOM05D000718 ORTHO05D003905 2.0e-06 56.2 48 58.3
Phvul.011G162100 Phaseolus vulgaris HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 73.5
RcHm_v2.0_Chr5g0030951 Rosa chinensis HOM05D000718 ORTHO05D003905 2.0e-06 56.2 54 53.7
SalBow8G1089 Salvia bowleyana HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 70.6
TWI39G1238 Tripterygium wilfordii HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 67.6
vmacro11936 Vaccinium macrocarpon HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 70.6
vmacro23383 Vaccinium macrocarpon HOM05D000718 ORTHO05D003905 2.0e-06 56.2 34 70.6
Solyc07g062460.4 Solanum lycopersicum HOM05D000718 ORTHO05D003905 2.6e-06 55.8 37 64.9
CSS0001779 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D003905 3.4e-06 55.5 53 47.2
Gorai.013G173800 Gossypium raimondii HOM05D000718 ORTHO05D003905 3.4e-06 55.5 34 70.6
MD03G1243400 Malus domestica HOM05D000718 ORTHO05D003905 3.4e-06 55.5 39 64.1
SalBow7G2917 Salvia bowleyana HOM05D000718 ORTHO05D003905 3.4e-06 55.5 33 72.7
SalBow7G4548 Salvia bowleyana HOM05D000718 ORTHO05D003905 3.4e-06 55.5 33 72.7
Cpa.g.c30496 Carica papaya HOM05D000718 ORTHO05D003905 4.4e-06 55.1 37 64.9
CsaV3_4G033130 Cucumis sativus L. HOM05D000718 ORTHO05D003905 4.4e-06 55.1 34 67.6
ECA240G0560 Erigeron canadensis HOM05D000718 ORTHO05D003905 4.4e-06 55.1 34 67.6
Prupe.4G164900 Prunus persica HOM05D000718 ORTHO05D003905 4.4e-06 55.1 31 71.0
PGSC0003DMG400015387 Solanum tuberosum HOM05D000718 ORTHO05D003905 4.4e-06 55.1 32 71.9
TPR.G8087 Trifolium pratense HOM05D000718 ORTHO05D003905 4.4e-06 55.1 35 68.6
TWI39G1231 Tripterygium wilfordii HOM05D000718 ORTHO05D003905 4.4e-06 55.1 34 67.6
VMungo1127G1811 Vigna mungo HOM05D000718 ORTHO05D003905 4.4e-06 55.1 44 56.8
MD03G1243300 Malus domestica HOM05D000718 ORTHO05D003905 5.7e-06 54.7 34 67.6
QL02p094759 Quercus lobata HOM05D000718 ORTHO05D003905 5.7e-06 54.7 34 64.7
PGSC0003DMG401021263 Solanum tuberosum HOM05D000718 ORTHO05D003905 5.7e-06 54.7 32 68.8
SGA_v2.0_scaffold111G31513 Striga asiatica HOM05D002714 ORTHO05D003085 5.7e-06 54.7 29 93.1
SGA_v2.0_scaffold54G19503 Striga asiatica HOM05D002714 ORTHO05D003085 5.7e-06 54.7 29 93.1
vmacro14648 Vaccinium macrocarpon HOM05D000718 ORTHO05D003905 5.7e-06 54.7 33 66.7
HPP92_021764 Vanilla planifolia HOM05D000718 ORTHO05D003905 5.7e-06 54.7 49 53.1
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 7.5e-06 54.3 31 71.0
DCAR_017171 Daucus carota HOM05D000718 ORTHO05D003905 7.5e-06 54.3 34 64.7
Gohir.D11G305512 Gossypium hirsutum HOM05D000718 ORTHO05D003905 7.5e-06 54.3 34 67.6
Gorai.007G326900 Gossypium raimondii HOM05D000718 ORTHO05D003905 7.5e-06 54.3 34 67.6
Thecc.07G111100 Theobroma cacao HOM05D000718 ORTHO05D003905 7.5e-06 54.3 35 62.9
Atru.chr2.2150 Acer truncatum HOM05D000718 ORTHO05D003905 9.8e-06 53.9 37 62.2
COL.COLO4_17553 Corchorus olitorius HOM05D000718 ORTHO05D003905 9.8e-06 53.9 55 54.5
Duzib268G1121 Durio zibethinus HOM05D000718 ORTHO05D003905 9.8e-06 53.9 34 67.6
Gohir.D13G153800 Gossypium hirsutum HOM05D000718 ORTHO05D003905 9.8e-06 53.9 34 67.6
HanXRQChr13g0390381 Helianthus annuus HOM05D000718 ORTHO05D003905 9.8e-06 53.9 38 60.5
Lsat_1_v5_gn_9_100000 Lactuca sativa HOM05D000718 ORTHO05D003905 9.8e-06 53.9 39 59.0
Potri.011G109700 Populus trichocarpa HOM05D000718 ORTHO05D003905 9.8e-06 53.9 34 64.7
QL02p094738 Quercus lobata HOM05D000718 ORTHO05D003905 9.8e-06 53.9 34 64.7
QL04p083599 Quercus lobata HOM05D000718 ORTHO05D003905 9.8e-06 53.9 34 64.7
Rhsim04G0026200 Rhododendron simsii HOM05D000718 ORTHO05D003905 9.8e-06 53.9 66 40.9


User provided reference genes

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