Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 1.0e-177 626.7 331 100.0
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 3.4e-109 399.1 323 70.0
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 3.5e-69 266.2 325 52.6
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 4.0e-65 252.7 336 49.4
SalBow3G3100 Salvia bowleyana HOM05D014524 ORTHO05D006541 6.4e-47 192.2 322 44.4
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 3.2e-46 189.9 338 44.7
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 4.3e-35 152.9 357 39.2
SalBow3G0625 Salvia bowleyana HOM05D014524 ORTHO05D006541 7.5e-32 142.1 277 42.2
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 2.5e-27 127.1 274 38.7
Dinv29788 Davidia involucrata HOM05D008171 ORTHO05D006541 5.4e-22 109.4 219 38.4
Rhsim07G0050800 Rhododendron simsii HOM05D008171 ORTHO05D006541 7.8e-21 105.5 287 34.8
Oeu061870.1 Olea europaea HOM05D008729 ORTHO05D006541 1.0e-20 105.1 117 51.3
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 2.5e-19 100.5 290 33.1
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 7.3e-19 99.0 336 30.1
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 7.3e-19 99.0 344 32.3
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 2.8e-18 97.1 219 37.4
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 4.7e-18 96.3 100 50.0
Cpa.g.sc59.27 Carica papaya HOM05D008171 ORTHO05D006541 8.1e-18 95.5 291 34.0
ClCG09G011900 Citrullus lanatus HOM05D008171 ORTHO05D006541 8.1e-18 95.5 270 31.5
Duzib177G0581 Durio zibethinus HOM05D008171 ORTHO05D006541 1.1e-17 95.1 225 37.3
Glyma.18G253500 Glycine max HOM05D008729 ORTHO05D006541 2.4e-17 94.0 234 35.9
Potri.004G028100 Populus trichocarpa HOM05D008171 ORTHO05D006541 3.1e-17 93.6 271 31.4
Nitab4.5_0009780g0020 Nicotiana tabacum HOM05D008171 ORTHO05D006541 5.2e-17 92.8 112 46.4
Sabra04G0016000 Salix brachista HOM05D008171 ORTHO05D006541 5.2e-17 92.8 232 34.9
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 8.9e-17 92.0 224 37.1
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 1.5e-16 91.3 120 46.7
Nitab4.5_0004705g0050 Nicotiana tabacum HOM05D008171 ORTHO05D006541 2.0e-16 90.9 97 48.5
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 2.6e-16 90.5 272 34.2
Atru.chr3.807 Acer truncatum HOM05D008171 ORTHO05D006541 3.4e-16 90.1 247 33.2
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 3.4e-16 90.1 274 34.7
Eucgr.F04204 Eucalyptus grandis HOM05D008729 ORTHO05D006541 3.8e-15 86.7 157 39.5
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 2.4e-14 84.0 163 37.4
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 3.2e-14 83.6 160 36.2
Sed0013719 Sechium edule HOM05D008171 ORTHO05D006541 3.2e-14 83.6 138 37.7
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 4.2e-14 83.2 244 32.4
Haze_11490 Corylus avellana HOM05D008171 ORTHO05D006541 5.4e-14 82.8 272 34.2
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 7.1e-14 82.4 326 29.1
Phvul.008G026200 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 7.1e-14 82.4 275 32.0
unitig_21.g20743 Utricularia gibba HOM05D050672 ORTHO05D006541 7.1e-14 82.4 278 33.1
Phvul.008G045500 Phaseolus vulgaris HOM05D008729 ORTHO05D006541 1.6e-13 81.3 275 31.3
Thecc.04G268400 Theobroma cacao HOM05D008171 ORTHO05D006541 1.6e-13 81.3 224 31.7
VMungo1383G3710 Vigna mungo HOM05D008729 ORTHO05D006541 2.1e-13 80.9 280 32.1
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 2.7e-13 80.5 266 31.2
FAN22G0719 Fragaria x ananassa HOM05D013250 ORTHO05D006541 2.7e-13 80.5 264 30.3
Oeu023142.1 Olea europaea HOM05D008171 ORTHO05D006541 2.7e-13 80.5 323 30.0
Prupe.1G051700 Prunus persica HOM05D013250 ORTHO05D006541 6.0e-13 79.3 249 32.9
Cc00_g01630 Coffea canephora HOM05D008729 ORTHO05D006541 7.8e-13 79.0 100 49.0
FvH4_4g05130 Fragaria vesca HOM05D013250 ORTHO05D006541 7.8e-13 79.0 287 27.5
RcHm_v2.0_Chr4g0396051 Rosa chinensis HOM05D013250 ORTHO05D006541 1.0e-12 78.6 264 30.7
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 3.0e-12 77.0 220 32.7
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 3.9e-12 76.6 187 34.8
Actinidia32333 Actinidia chinensis HOM05D008171 ORTHO05D006541 2.5e-11 73.9 253 33.2
FAN12G1247 Fragaria x ananassa HOM05D013250 ORTHO05D006541 2.5e-11 73.9 287 27.5
Psat3g195600 Pisum sativum HOM05D008729 ORTHO05D006541 2.5e-11 73.9 176 36.4
Ca_04035_v3 Cicer arietinum L. HOM05D008729 ORTHO05D006541 7.3e-11 72.4 191 36.1
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 7.3e-11 72.4 85 51.8
Lj1g0024023 Lotus japonicus HOM05D008729 ORTHO05D006541 7.3e-11 72.4 209 32.5
TPR.G6386 Trifolium pratense HOM05D008729 ORTHO05D006541 9.6e-11 72.0 188 31.9
CsaV3_3G049130 Cucumis sativus L. HOM05D008171 ORTHO05D006541 1.3e-10 71.6 263 30.8
DCAR_027373 Daucus carota HOM05D008171 ORTHO05D006541 1.3e-10 71.6 223 34.5
DCAR_002271 Daucus carota HOM05D008729 ORTHO05D006541 1.6e-10 71.2 278 32.7
CiPaw.01G175900 Carya illinoinensis HOM05D008171 ORTHO05D006541 2.1e-10 70.9 86 45.3
MD13G1018300 Malus domestica HOM05D008171 ORTHO05D006541 4.8e-10 69.7 159 29.6
TPR.G16999 Trifolium pratense HOM05D008729 ORTHO05D006541 1.1e-09 68.6 226 29.2
QL06p021862 Quercus lobata HOM05D008171 ORTHO05D006541 1.8e-09 67.8 277 32.1
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 2.4e-09 67.4 79 45.6
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 6.9e-09 65.9 47 66.0
MD16G1230200 Malus domestica HOM05D013250 ORTHO05D006541 6.9e-09 65.9 214 30.4
FAN07G0121 Fragaria x ananassa HOM05D022272 ORTHO05D006541 9.0e-09 65.5 115 33.9
Lalb_Chr03g0040281 Lupinus albus HOM05D008729 ORTHO05D006541 9.0e-09 65.5 277 32.5
FvH4_4g33320 Fragaria vesca HOM05D022272 ORTHO05D006541 1.2e-08 65.1 121 34.7
A05p13010 Brassica napus HOM05D008171 ORTHO05D006541 1.5e-08 64.7 270 26.7
FAN07G2840 Fragaria x ananassa HOM05D004513 ORTHO05D005459 1.5e-08 64.7 130 32.3
FAN12G2236 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.5e-08 64.7 122 36.1
FAN22G1062 Fragaria x ananassa HOM05D022272 ORTHO05D006541 2.0e-08 64.3 123 35.8
Medtr4g072520 Medicago truncatula HOM05D008729 ORTHO05D006541 3.4e-08 63.5 200 27.5
CAN.G184.75 Capsicum annuum HOM05D001868 ORTHO05D009153 5.8e-08 62.8 102 36.3
Prupe.1G335500 Prunus persica HOM05D008171 ORTHO05D006541 7.6e-08 62.4 218 31.2
BcaB02g10481 Brassica carinata HOM05D008171 ORTHO05D006541 9.9e-08 62.0 274 28.8
BraA05t20241Z Brassica rapa HOM05D008171 ORTHO05D006541 9.9e-08 62.0 265 26.8
Medtr4g072710 Medicago truncatula HOM05D008729 ORTHO05D006541 1.3e-07 61.6 203 31.0
Medtr5g069720 Medicago truncatula HOM05D008729 ORTHO05D006541 1.3e-07 61.6 203 28.6
C04p17400 Brassica napus HOM05D008171 ORTHO05D006541 1.7e-07 61.2 272 28.7
BolC4t23290H Brassica oleracea HOM05D008171 ORTHO05D006541 1.7e-07 61.2 272 28.7
SalBow3G0463 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.9e-07 60.5 37 70.3
Medtr4g072430 Medicago truncatula HOM05D008729 ORTHO05D006541 3.8e-07 60.1 208 27.9
SalBow4G0482 Salvia bowleyana HOM05D014524 ORTHO05D006541 3.8e-07 60.1 92 46.7
AT2G32235 Arabidopsis thaliana HOM05D008171 ORTHO05D006541 6.4e-07 59.3 286 26.6
MELO3C003414.2 Cucumis melo HOM05D008171 ORTHO05D006541 6.4e-07 59.3 90 41.1
Medtr5g069080 Medicago truncatula HOM05D008729 ORTHO05D006541 6.4e-07 59.3 47 55.3
Carub.0004s1355 Capsella rubella HOM05D008171 ORTHO05D006541 1.1e-06 58.5 276 26.1
RcHm_v2.0_Chr4g0442521 Rosa chinensis HOM05D013250 ORTHO05D006541 1.1e-06 58.5 63 42.9
FAN17G0494 Fragaria x ananassa HOM05D022272 ORTHO05D006541 1.4e-06 58.2 143 30.1
Medtr5g068870 Medicago truncatula HOM05D008729 ORTHO05D006541 1.4e-06 58.2 45 57.8
Medtr4g052440 Medicago truncatula HOM05D008729 ORTHO05D006541 1.9e-06 57.8 53 49.1
Medtr7g007830 Medicago truncatula HOM05D008729 ORTHO05D006541 7.1e-06 55.8 118 33.9
CANSAT78G0015 Cannabis sativa HOM05D008171 ORTHO05D006541 9.3e-06 55.5 294 31.0


User provided reference genes

Program Settings