Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 3.4e-72 275.0 152 100.0
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 3.1e-49 198.7 188 60.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.2e-23 112.8 186 43.0
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.5e-22 110.2 188 41.0
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.4e-20 103.6 190 38.4
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 8.8e-20 100.9 194 37.1
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 8.8e-20 100.9 188 38.3
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.5e-19 100.1 188 38.8
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.5e-19 100.1 188 38.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.0e-19 99.8 188 38.3
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.6e-19 99.4 188 38.8
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.6e-19 99.4 190 37.9
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 4.4e-19 98.6 190 38.4
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 4.4e-19 98.6 188 37.8
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.5e-19 97.8 194 36.6
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 7.5e-19 97.8 188 37.8
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 1.7e-18 96.7 188 36.7
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.7e-18 96.7 188 36.7
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 1.7e-18 96.7 190 36.8
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 2.2e-18 96.3 190 35.8
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.2e-18 96.3 188 37.2
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 3.7e-18 95.5 178 38.2
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 4.9e-18 95.1 188 37.2
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 6.3e-18 94.7 188 38.3
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 8.3e-18 94.4 190 36.3
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 8.3e-18 94.4 190 36.8
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 8.3e-18 94.4 190 36.8
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.1e-17 94.0 190 36.3
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.4e-17 92.8 190 36.8
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 2.4e-17 92.8 196 33.2
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 5.4e-17 91.7 200 34.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 7.0e-17 91.3 188 37.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 7.0e-17 91.3 191 36.6
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.6e-16 90.1 196 34.2
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.6e-16 90.1 190 33.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 2.0e-16 89.7 188 35.6
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 2.7e-16 89.4 190 35.3
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.7e-16 89.4 190 33.7
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 3.5e-16 89.0 188 36.7
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 3.5e-16 89.0 190 34.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 4.5e-16 88.6 190 35.8
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.3e-15 87.0 190 33.2
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.3e-15 87.0 186 36.0
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.3e-15 87.0 186 36.0
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 2.3e-15 86.3 54 70.4
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 5.0e-15 85.1 190 35.3
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.6e-15 84.7 56 67.9
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 6.6e-15 84.7 210 31.9
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 6.6e-15 84.7 196 32.1
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 8.6e-15 84.3 196 32.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 8.6e-15 84.3 188 35.1
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-14 84.0 196 32.7
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 1.1e-14 84.0 188 35.1
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 1.5e-14 83.6 54 72.2
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.9e-14 83.2 188 34.0
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 1.9e-14 83.2 188 34.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 3.3e-14 82.4 196 32.1
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 3.3e-14 82.4 196 32.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 4.3e-14 82.0 188 34.0
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 5.6e-14 81.6 198 32.3
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 7.3e-14 81.3 186 33.9
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 7.3e-14 81.3 186 33.9
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 9.5e-14 80.9 196 32.7
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 9.5e-14 80.9 188 33.0
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 9.5e-14 80.9 239 30.5
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.2e-13 80.5 196 32.7
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.2e-13 80.5 188 35.6
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.6e-13 80.1 196 32.7
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.1e-13 79.7 196 31.6
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 2.1e-13 79.7 190 32.6
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 2.8e-13 79.3 196 32.7
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 2.8e-13 79.3 188 34.0
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 4.7e-13 78.6 196 31.6
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.4e-12 77.0 196 31.6
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.8e-12 76.6 190 33.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.8e-12 76.6 190 33.2
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.8e-12 76.6 196 32.7
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 1.8e-12 76.6 190 31.6
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 1.8e-12 76.6 188 32.4
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 3.0e-12 75.9 190 31.6
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 4.0e-12 75.5 190 31.6
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 4.0e-12 75.5 190 31.6
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.0e-12 75.5 190 31.6
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 4.0e-12 75.5 190 32.6
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 4.0e-12 75.5 190 32.6
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 4.0e-12 75.5 169 34.9
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 4.0e-12 75.5 196 30.1
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 5.2e-12 75.1 190 31.6
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 5.2e-12 75.1 190 31.6
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 5.2e-12 75.1 190 31.6
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 6.8e-12 74.7 190 30.0
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.2e-11 73.9 190 31.6
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.5e-11 73.6 190 32.6
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 2.0e-11 73.2 190 32.1
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 2.6e-11 72.8 190 31.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 3.4e-11 72.4 188 32.4
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 7.5e-11 71.2 52 63.5
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 9.8e-11 70.9 190 30.5
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 2.2e-10 69.7 54 59.3
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.7e-10 68.9 54 57.4
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 3.7e-10 68.9 178 32.6
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.2e-08 63.9 54 55.6
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.2e-08 63.9 54 59.3
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 3.0e-07 59.3 163 32.5


User provided reference genes

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