Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.0e-105 386.7 192 100.0
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.1e-48 197.2 188 60.6
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 2.7e-42 176.0 208 52.4
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.1e-40 170.6 210 49.5
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 8.2e-39 164.5 208 47.6
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 2.4e-38 162.9 201 49.3
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 5.3e-38 161.8 201 48.8
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 2.6e-37 159.5 208 46.6
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.0e-36 157.5 208 47.1
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.3e-36 157.1 198 48.5
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 1.3e-36 157.1 208 45.7
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 1.7e-36 156.8 208 45.7
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 2.9e-36 156.0 198 49.0
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 6.5e-36 154.8 208 45.2
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 4.2e-35 152.1 208 45.2
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 4.2e-35 152.1 210 44.3
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 5.5e-35 151.8 198 48.5
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 9.4e-35 151.0 210 43.8
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 9.4e-35 151.0 198 48.5
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 9.4e-35 151.0 210 43.8
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.2e-34 150.6 210 42.9
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.6e-34 150.2 209 43.5
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-34 150.2 208 44.7
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-34 150.2 208 44.2
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 1.6e-34 150.2 199 47.2
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 3.6e-34 149.1 210 43.8
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 3.6e-34 149.1 208 44.2
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 4.7e-34 148.7 210 43.3
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 8.0e-34 147.9 210 43.3
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.0e-34 147.9 210 43.3
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 8.0e-34 147.9 198 48.0
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.4e-33 147.1 210 43.3
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 1.4e-33 147.1 210 43.3
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 1.4e-33 147.1 243 40.3
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.3e-33 146.4 210 44.3
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 5.2e-33 145.2 210 42.9
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 8.8e-33 144.4 208 43.8
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.2e-32 144.1 210 42.4
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 1.2e-32 144.1 210 43.8
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 2.6e-32 142.9 210 42.9
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 5.7e-32 141.7 210 42.4
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 7.5e-32 141.4 220 41.8
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 7.5e-32 141.4 210 42.4
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 7.5e-32 141.4 208 43.3
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 9.7e-32 141.0 210 42.4
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 1.7e-31 140.2 210 41.9
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 6.3e-31 138.3 208 41.8
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 8.2e-31 137.9 210 39.5
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.1e-30 137.5 210 41.4
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 1.4e-30 137.1 210 41.4
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 1.8e-30 136.7 210 43.3
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.8e-30 136.7 282 35.5
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 2.4e-30 136.3 210 40.0
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 4.1e-30 135.6 210 41.0
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 4.1e-30 135.6 210 41.0
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 5.3e-30 135.2 210 41.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 5.3e-30 135.2 210 40.5
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 7.0e-30 134.8 210 41.9
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 7.0e-30 134.8 212 41.0
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 7.0e-30 134.8 210 41.0
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.2e-29 134.0 194 43.3
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.6e-29 133.7 198 42.4
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.6e-29 133.7 210 39.0
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 2.0e-29 133.3 210 40.5
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 2.0e-29 133.3 210 40.5
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 2.0e-29 133.3 210 40.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 2.7e-29 132.9 210 40.5
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.5e-29 132.5 210 40.5
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 3.5e-29 132.5 210 40.5
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 3.5e-29 132.5 198 42.4
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.5e-29 132.1 210 40.0
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 4.5e-29 132.1 210 39.5
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 4.5e-29 132.1 210 40.0
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 5.9e-29 131.7 210 40.0
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 5.9e-29 131.7 210 40.0
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 5.9e-29 131.7 210 40.5
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 7.7e-29 131.3 210 40.0
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 7.7e-29 131.3 208 39.9
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.0e-28 131.0 210 40.5
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.3e-28 130.6 210 41.0
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.3e-28 130.6 210 39.5
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.7e-28 130.2 210 40.0
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 2.2e-28 129.8 210 39.5
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 5.0e-28 128.6 191 42.4
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 6.5e-28 128.3 210 40.0
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 6.5e-28 128.3 196 41.3
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 8.5e-28 127.9 210 39.0
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 8.5e-28 127.9 210 38.6
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 3.2e-27 125.9 210 38.6
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 4.2e-27 125.6 187 42.2
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 5.5e-27 125.2 196 41.3
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 5.5e-27 125.2 210 38.6
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 9.4e-27 124.4 210 38.6
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 3.6e-26 122.5 210 37.1
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 6.1e-26 121.7 210 37.6
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 2.0e-24 116.7 173 42.8
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 2.6e-24 116.3 210 37.1
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 3.1e-22 109.4 209 39.2
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 5.9e-21 105.1 201 36.3
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 1.5e-19 100.5 211 36.0
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 8.0e-18 94.7 182 37.4
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.0e-17 94.4 173 39.9
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 3.0e-17 92.8 57 70.2
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 1.2e-16 90.9 57 68.4
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.4e-16 89.4 62 66.1
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 3.4e-16 89.4 62 66.1
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 7.5e-16 88.2 57 64.9
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 3.7e-15 85.9 58 67.2
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 4.9e-15 85.5 57 64.9
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 6.3e-15 85.1 57 64.9
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 1.8e-14 83.6 54 72.2
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 2.7e-13 79.7 106 45.3
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 5.9e-13 78.6 58 63.8
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 7.3e-11 71.6 57 54.4
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 7.3e-11 71.6 57 54.4
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 7.3e-11 71.6 57 54.4
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 2.1e-10 70.1 198 32.3
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 4.4e-08 62.4 190 31.1
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 7.5e-08 61.6 57 49.1
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 1.7e-07 60.5 58 48.3
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 8.3e-07 58.2 57 52.6
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.2e-06 56.2 213 26.8
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 5.4e-06 55.5 42 59.5


User provided reference genes

Program Settings