Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 7.1e-102 374.0 198 100.0
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.2e-46 188.7 213 54.0
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.2e-46 188.7 213 54.0
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 1.8e-41 173.3 229 48.9
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 2.6e-40 169.5 200 51.0
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 1.2e-37 160.6 214 48.6
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.7e-37 158.7 226 49.1
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.1e-33 147.5 214 43.5
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 5.3e-33 145.2 216 43.5
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 9.1e-33 144.4 201 44.8
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 5.9e-32 141.7 221 43.4
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 1.3e-31 140.6 220 41.8
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 2.9e-31 139.4 216 39.8
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 3.8e-31 139.0 215 46.0
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 8.5e-31 137.9 219 42.9
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 4.0e-28 129.0 217 41.0
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 1.1e-27 127.5 215 41.4
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.5e-27 127.1 213 40.4
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.3e-26 124.0 211 39.3
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 1.3e-26 124.0 216 37.5
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 4.8e-26 122.1 186 43.0
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 8.2e-26 121.3 194 39.2
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 1.4e-25 120.6 262 35.9
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 3.1e-25 119.4 224 38.8
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 7.0e-25 118.2 221 39.4
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.0e-24 116.7 222 37.8
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.0e-24 116.7 222 37.8
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.7e-24 116.3 216 36.6
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 3.5e-24 115.9 215 35.3
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 3.5e-24 115.9 222 37.8
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 3.5e-24 115.9 222 36.9
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 3.5e-24 115.9 209 39.2
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 4.5e-24 115.5 204 37.7
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 5.9e-24 115.2 195 41.5
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.3e-23 114.0 214 37.4
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.3e-23 114.0 193 36.8
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 1.7e-23 113.6 223 37.2
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.9e-23 112.8 215 38.1
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 2.9e-23 112.8 223 35.9
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.0e-23 112.1 235 35.3
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.5e-23 111.7 223 36.8
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 6.5e-23 111.7 216 38.4
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 8.5e-23 111.3 213 38.0
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.5e-22 109.8 203 36.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 2.5e-22 109.8 216 35.6
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.5e-22 109.8 209 37.8
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 4.2e-22 109.0 225 35.6
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 4.2e-22 109.0 225 35.6
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 9.4e-22 107.8 169 40.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.2e-21 107.5 200 36.0
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 1.2e-21 107.5 185 41.6
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 3.6e-21 105.9 208 37.0
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 3.6e-21 105.9 212 34.0
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 4.7e-21 105.5 217 35.0
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 4.7e-21 105.5 211 36.0
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 4.7e-21 105.5 213 37.1
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 4.7e-21 105.5 215 34.4
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 6.1e-21 105.1 208 34.1
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 8.0e-21 104.8 230 35.2
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.8e-20 103.6 205 37.6
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.3e-20 103.2 215 34.9
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.0e-20 102.8 201 38.3
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 5.2e-20 102.1 206 37.9
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 6.8e-20 101.7 214 35.5
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 1.5e-19 100.5 88 54.5
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.5e-19 100.5 220 33.6
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.6e-19 99.8 205 36.1
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 3.4e-19 99.4 211 36.0
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 4.4e-19 99.0 203 35.5
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 5.7e-19 98.6 207 34.3
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 4.8e-18 95.5 195 35.4
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 6.3e-18 95.1 192 37.5
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 1.4e-17 94.0 192 37.5
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.4e-17 94.0 198 33.8
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 3.1e-17 92.8 192 37.5
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 5.4e-17 92.0 240 31.2
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 5.4e-17 92.0 194 34.5
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 5.4e-17 92.0 155 40.6
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 7.0e-17 91.7 224 32.6
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 7.7e-16 88.2 85 54.1
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 1.0e-15 87.8 181 35.9
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.7e-15 87.0 168 36.9
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.7e-15 87.0 112 44.6
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.9e-15 86.3 177 36.7
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.9e-15 86.3 162 38.9
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 5.0e-15 85.5 213 32.9
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.1e-14 84.3 180 36.1
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.5e-14 84.0 213 30.5
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.5e-14 83.2 213 32.9
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 4.2e-14 82.4 169 37.3
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 7.2e-14 81.6 193 37.3
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 7.2e-14 81.6 88 47.7
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.2e-13 80.9 204 31.9
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.1e-13 80.1 98 44.9
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 2.7e-13 79.7 229 31.0
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 3.6e-13 79.3 229 31.0
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.1e-13 78.6 214 32.2
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 6.1e-13 78.6 180 31.7
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.0e-12 76.3 168 34.5
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 5.2e-12 75.5 211 32.2
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 5.2e-12 75.5 211 32.2
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.2e-12 75.5 171 35.7
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.2e-11 74.3 173 34.7
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.5e-11 73.9 213 31.0
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 2.0e-11 73.6 211 32.2
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.0e-11 73.6 215 30.7
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-11 73.2 212 32.5
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 7.5e-11 71.6 153 35.3
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 8.3e-10 68.2 99 42.4
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 8.3e-10 68.2 162 35.8
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.4e-09 67.4 102 45.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 1.8e-09 67.0 178 34.3
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 1.8e-09 67.0 178 34.3
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 1.8e-09 67.0 178 34.3
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 3.1e-09 66.2 174 34.5
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.1e-09 66.2 194 31.4
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.1e-09 65.9 171 33.9
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 5.4e-09 65.5 178 33.1
Nitab4.5_0000867g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 7.0e-09 65.1 69 52.2
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.2e-08 64.3 103 41.7
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.7e-08 63.2 69 50.7
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.7e-08 63.2 148 34.5
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 4.5e-08 62.4 177 31.6
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 7.7e-08 61.6 179 26.3
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.0e-07 61.2 202 32.2
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.3e-07 60.8 86 39.5
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 3.8e-07 59.3 182 31.3
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 1.9e-06 57.0 156 34.0
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 9.5e-06 54.7 179 28.5


User provided reference genes

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