Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12592 Striga asiatica HOM05D007349 ORTHO05D009317 8.8e-122 440.3 218 100.0
SalBow3G0646 Salvia bowleyana HOM05D007349 ORTHO05D009317 5.5e-39 165.2 243 44.9
Migut.N00367 Erythranthe guttata HOM05D007349 ORTHO05D009317 6.9e-26 121.7 232 39.2
Dinv29576 Davidia involucrata HOM05D007349 ORTHO05D009317 1.2e-25 120.9 233 35.6
MSTRG.21955 Avicennia marina HOM05D007349 ORTHO05D009317 1.5e-25 120.6 125 53.6
Dinv29581 Davidia involucrata HOM05D007349 ORTHO05D009317 4.5e-25 119.0 232 35.8
Hma1.2p1_2958F.1_g330790 Hydrangea macrophylla HOM05D007349 ORTHO05D009317 5.9e-25 118.6 233 36.5
Oeu026866.1 Olea europaea HOM05D007349 ORTHO05D009317 1.0e-24 117.9 278 33.1
Nitab4.5_0008389g0020 Nicotiana tabacum HOM05D007349 ORTHO05D009317 1.7e-24 117.1 229 35.8
unitig_8.g4490 Utricularia gibba HOM05D007349 ORTHO05D009317 8.5e-24 114.8 152 41.4
CSS0029747 Camellia sinensis var. sinensis HOM05D007349 ORTHO05D009317 9.4e-23 111.3 235 35.3
DCAR_024489 Daucus carota HOM05D007349 ORTHO05D009317 2.1e-22 110.2 233 36.1
Cc03_g07560 Coffea canephora HOM05D007349 ORTHO05D009317 1.0e-21 107.8 227 35.2
GSVIVG01029086001 Vitis vinifera HOM05D007349 ORTHO05D009317 3.0e-21 106.3 233 35.6
Sed0005273 Sechium edule HOM05D007349 ORTHO05D009317 2.6e-20 103.2 242 34.3
Haze_11590 Corylus avellana HOM05D007349 ORTHO05D009317 3.3e-20 102.8 155 40.6
Rhsim09G0053700 Rhododendron simsii HOM05D007349 ORTHO05D009317 4.4e-20 102.4 240 33.8
PGSC0003DMG400016859 Solanum tuberosum HOM05D007349 ORTHO05D009317 4.4e-20 102.4 231 32.9
Ciclev10005791m.g Citrus clementina HOM05D007349 ORTHO05D009317 5.7e-20 102.1 244 36.9
Cfa011815 Carpinus fangiana HOM05D007349 ORTHO05D009317 2.8e-19 99.8 231 33.8
CiPaw.01G123800 Carya illinoinensis HOM05D007349 ORTHO05D009317 3.1e-18 96.3 232 33.6
CANSAT78G2317 Cannabis sativa HOM05D007349 ORTHO05D009317 1.6e-17 94.0 225 35.6
ClCG05G003470 Citrullus lanatus HOM05D007349 ORTHO05D009317 1.6e-17 94.0 235 32.3
Lsat_1_v5_gn_6_59420 Lactuca sativa HOM05D007349 ORTHO05D009317 2.6e-17 93.2 140 35.7
RcHm_v2.0_Chr4g0385541 Rosa chinensis HOM05D007349 ORTHO05D009317 7.7e-17 91.7 230 32.6
CsaV3_3G011130 Cucumis sativus L. HOM05D007349 ORTHO05D009317 1.0e-16 91.3 236 31.4
Nn3g19440 Nelumbo nucifera HOM05D007349 ORTHO05D009317 1.0e-16 91.3 236 32.6
PSO210G4925 Papaver somniferum HOM05D007349 ORTHO05D009317 1.0e-16 91.3 76 55.3
RcHm_v2.0_Chr6g0244431 Rosa chinensis HOM05D007349 ORTHO05D009317 1.0e-16 91.3 219 32.0
FAN12G2695 Fragaria x ananassa HOM05D007349 ORTHO05D009317 2.9e-16 89.7 154 39.0
FvH4_4g00420 Fragaria vesca HOM05D007349 ORTHO05D009317 1.1e-15 87.8 154 38.3
Peaxi162Scf00938g00312 Petunia axillaris HOM05D007349 ORTHO05D009317 1.9e-15 87.0 86 54.7
MD04G1004500 Malus domestica HOM05D007349 ORTHO05D009317 2.5e-15 86.7 107 48.6
Ca_10404_v3 Cicer arietinum L. HOM05D007349 ORTHO05D009317 4.2e-15 85.9 233 35.2
MBI07_g23672_MAGBIO Magnolia biondii HOM05D007349 ORTHO05D009317 4.2e-15 85.9 232 31.9
Nitab4.5_0000676g0280 Nicotiana tabacum HOM05D007349 ORTHO05D009317 5.5e-15 85.5 214 31.3
TAR103G0001 Trochodendron aralioides HOM05D007349 ORTHO05D009317 5.5e-15 85.5 94 43.6
ECA248G1485 Erigeron canadensis HOM05D007349 ORTHO05D009317 7.2e-15 85.1 202 31.7
Lalb_Chr21g0312631 Lupinus albus HOM05D007349 ORTHO05D009317 7.2e-15 85.1 148 44.6
VMungo0720G2898 Vigna mungo HOM05D007349 ORTHO05D009317 7.2e-15 85.1 145 38.6
ATR0329G016 Amborella trichopoda HOM05D007349 ORTHO05D009317 9.4e-15 84.7 214 31.3
Gohir.A09G052212 Gossypium hirsutum HOM05D007349 ORTHO05D009317 9.4e-15 84.7 171 38.6
Gorai.006G056500 Gossypium raimondii HOM05D007349 ORTHO05D009317 9.4e-15 84.7 237 34.6
Medtr1g090010 Medicago truncatula HOM05D007349 ORTHO05D009317 9.4e-15 84.7 237 33.3
Eucgr.H02845 Eucalyptus grandis HOM05D007349 ORTHO05D009317 1.6e-14 84.0 98 45.9
Glyma.20G197951 Glycine max HOM05D007349 ORTHO05D009317 2.1e-14 83.6 86 48.8
HanXRQChr07g0185641 Helianthus annuus HOM05D007349 ORTHO05D009317 2.7e-14 83.2 253 28.9
QL06p023778 Quercus lobata HOM05D007349 ORTHO05D009317 2.7e-14 83.2 180 33.3
Phvul.007G134400 Phaseolus vulgaris HOM05D007349 ORTHO05D009317 3.6e-14 82.8 158 36.7
Glyma.10G192600 Glycine max HOM05D007349 ORTHO05D009317 6.1e-14 82.0 156 37.2
Thecc.04G207000 Theobroma cacao HOM05D007349 ORTHO05D009317 6.1e-14 82.0 162 40.7
TWI09G1137 Tripterygium wilfordii HOM05D007349 ORTHO05D009317 6.1e-14 82.0 246 32.1
Cpa.g.sc59.118 Carica papaya HOM05D007349 ORTHO05D009317 8.0e-14 81.6 219 32.4
Sopen12g033040 Solanum pennellii HOM05D007349 ORTHO05D009317 8.0e-14 81.6 97 47.4
Potri.003G177900 Populus trichocarpa HOM05D007349 ORTHO05D009317 1.0e-13 81.3 77 54.5
Solyc12g098220.2 Solanum lycopersicum HOM05D007349 ORTHO05D009317 1.0e-13 81.3 79 53.2
Aqoxy5G00063 Aquilegia oxysepala HOM05D007349 ORTHO05D009317 1.4e-13 80.9 245 29.4
FAN22G0302 Fragaria x ananassa HOM05D007349 ORTHO05D009317 1.4e-13 80.9 166 36.7
Gohir.D09G052924 Gossypium hirsutum HOM05D007349 ORTHO05D009317 1.8e-13 80.5 235 32.8
PGR142G2055 Punica granatum HOM05D007349 ORTHO05D009317 1.8e-13 80.5 144 36.1
Sabra03G0130400 Salix brachista HOM05D007349 ORTHO05D009317 1.8e-13 80.5 77 53.2
Manes.03G149400 Manihot esculenta HOM05D007349 ORTHO05D009317 2.3e-13 80.1 153 39.2
Zm00001eb046010 Zea mays HOM05D007349 ORTHO05D009317 2.3e-13 80.1 83 47.0
Lj5g0019311 Lotus japonicus HOM05D007349 ORTHO05D009317 5.2e-13 79.0 191 35.1
Duzib212G0593 Durio zibethinus HOM05D007349 ORTHO05D009317 1.2e-12 77.8 171 33.9
Hund19205 Selenicereus undatus HOM05D007349 ORTHO05D009317 1.2e-12 77.8 167 31.7
EL10Ac3g06899 Beta vulgaris HOM05D007349 ORTHO05D009317 1.5e-12 77.4 82 45.1
Psat0s3951g0040 Pisum sativum HOM05D007349 ORTHO05D009317 2.0e-12 77.0 246 32.1
arahy.Tifrunner.gnm1.ann1.FV8RA9 Arachis hypogaea HOM05D007349 ORTHO05D009317 2.6e-12 76.6 132 37.9
arahy.Tifrunner.gnm1.ann1.X6WBXQ Arachis hypogaea HOM05D007349 ORTHO05D009317 2.6e-12 76.6 132 37.9
TPR.G13407 Trifolium pratense HOM05D007349 ORTHO05D009317 2.6e-12 76.6 78 50.0
CARHR219460 Cardamine hirsuta HOM05D007349 ORTHO05D009317 1.3e-11 74.3 116 41.4
MELO3C006324.2 Cucumis melo HOM05D007349 ORTHO05D009317 1.3e-11 74.3 226 28.3
vmacro00487 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.7e-11 73.9 167 31.7
AT4G13690 Arabidopsis thaliana HOM05D007349 ORTHO05D009317 2.2e-11 73.6 80 48.8
Ah.13g075780 Amaranthus hybridus HOM05D007349 ORTHO05D009317 3.1e-10 69.7 232 30.2
Prupe.1G004200 Prunus persica HOM05D007349 ORTHO05D009317 5.3e-10 68.9 175 30.9
C04p42240 Brassica napus HOM05D007349 ORTHO05D009317 2.0e-09 67.0 79 46.8
AL7G42820 Arabidopsis lyrata HOM05D007349 ORTHO05D009317 2.7e-09 66.6 48 62.5
BcaC02g09398 Brassica carinata HOM05D007349 ORTHO05D009317 3.5e-09 66.2 79 45.6
BolC4t25802H Brassica oleracea HOM05D007349 ORTHO05D009317 4.5e-09 65.9 79 45.6
Sp7g11450 Schrenkiella parvula HOM05D007349 ORTHO05D009317 1.0e-08 64.7 125 36.8
TAR636G1730 Trochodendron aralioides HOM05D007349 ORTHO05D009317 1.0e-08 64.7 42 64.3
Carub.0007s2878 Capsella rubella HOM05D007349 ORTHO05D009317 1.3e-08 64.3 202 30.7
Aa31LG9G3970 Aethionema arabicum HOM05D007349 ORTHO05D009317 2.2e-08 63.5 222 28.8
AUR62012020 Chenopodium quinoa HOM05D007349 ORTHO05D009317 2.2e-08 63.5 79 43.0
AUR62015355 Chenopodium quinoa HOM05D007349 ORTHO05D009317 6.5e-08 62.0 148 33.1
BraA04t16541Z Brassica rapa HOM05D007349 ORTHO05D009317 8.5e-08 61.6 81 42.0
BcaB03g16060 Brassica carinata HOM05D007349 ORTHO05D009317 1.1e-07 61.2 221 30.3
A04p08500 Brassica napus HOM05D007349 ORTHO05D009317 1.1e-07 61.2 81 42.0
Thhalv10026053m.g Eutrema salsugineum HOM05D007349 ORTHO05D009317 1.9e-07 60.5 130 36.9
THA.LOC104808722 Tarenaya hassleriana HOM05D007349 ORTHO05D009317 9.4e-07 58.2 214 29.9


User provided reference genes

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