Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 7.8e-192 673.7 359 100.0
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 1.4e-156 556.6 357 84.0
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 2.2e-146 522.7 357 78.7
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 2.4e-140 502.7 371 73.9
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 1.8e-135 486.5 362 73.8
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 2.0e-131 473.0 357 71.1
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 5.0e-130 468.4 358 70.1
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 6.5e-130 468.0 357 70.6
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 1.9e-129 466.5 339 72.3
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 5.5e-129 464.9 338 72.5
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 1.2e-128 463.8 369 68.3
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 1.8e-124 449.9 359 70.2
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 1.2e-123 447.2 431 59.4
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 5.0e-122 441.8 336 69.6
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 3.2e-121 439.1 347 68.3
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 7.2e-121 438.0 375 64.0
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 3.3e-118 429.1 338 66.6
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 4.8e-117 425.2 360 64.7
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 4.8e-117 425.2 336 65.8
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 2.4e-116 422.9 344 65.7
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 9.1e-116 421.0 356 62.4
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 3.5e-115 419.1 334 65.0
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 4.5e-115 418.7 350 64.0
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 1.7e-114 416.8 342 66.1
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 2.2e-114 416.4 344 63.7
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 2.9e-114 416.0 338 63.3
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 3.8e-114 415.6 336 64.9
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 5.0e-114 415.2 358 62.3
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 8.5e-114 414.5 402 59.5
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 2.5e-113 412.9 351 63.5
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.2e-113 412.1 336 64.9
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 4.2e-113 412.1 357 62.7
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 4.2e-113 412.1 320 70.0
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 5.5e-113 411.8 335 63.9
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.7e-112 409.5 336 64.3
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 1.8e-111 406.8 357 62.2
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.8e-111 404.8 336 64.0
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 6.8e-111 404.8 320 69.1
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 6.8e-111 404.8 320 69.7
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 1.2e-110 404.1 347 60.8
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 1.2e-110 404.1 339 64.3
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 9.8e-110 401.0 342 62.6
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 3.7e-109 399.1 341 63.0
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 1.2e-107 394.0 341 61.6
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 1.6e-107 393.7 278 75.5
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 1.6e-107 393.7 354 59.0
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.0e-107 393.3 357 59.9
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 2.7e-107 392.9 353 59.2
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 3.5e-107 392.5 361 59.6
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 3.5e-107 392.5 355 60.8
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 5.9e-107 391.7 357 58.5
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 5.9e-107 391.7 336 61.3
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 5.9e-107 391.7 342 59.9
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 7.7e-107 391.3 344 61.6
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 1.3e-106 390.6 356 59.8
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 2.9e-106 389.4 332 62.0
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 1.9e-105 386.7 341 58.1
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 4.2e-105 385.6 333 60.7
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 9.5e-105 384.4 342 58.8
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 1.2e-104 384.0 338 60.7
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 2.8e-104 382.9 338 59.5
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 3.6e-104 382.5 339 59.9
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 1.8e-103 380.2 338 59.8
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 1.8e-103 380.2 341 59.5
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 1.8e-103 380.2 476 49.2
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 3.0e-103 379.4 381 56.2
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 1.5e-102 377.1 363 56.7
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.4e-102 375.6 336 60.1
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 2.8e-101 372.9 356 55.3
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 4.9e-101 372.1 353 56.4
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 7.8e-99 364.8 308 64.0
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 4.3e-97 359.0 336 60.7
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 1.2e-96 357.5 338 56.8
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 1.2e-96 357.5 293 65.2
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 1.6e-96 357.1 338 56.8
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 1.0e-95 354.4 338 56.8
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 1.8e-95 353.6 309 59.9
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 4.0e-95 352.4 345 55.7
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 5.2e-95 352.1 358 55.6
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 5.2e-95 352.1 444 47.3
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 1.5e-94 350.5 346 56.1
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 4.4e-94 349.0 344 55.8
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 5.8e-94 348.6 333 54.4
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 9.8e-94 347.8 351 54.1
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 3.7e-93 345.9 349 54.4
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 3.7e-93 345.9 336 56.2
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 3.7e-93 345.9 336 56.2
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 3.7e-93 345.9 317 64.0
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 6.4e-93 345.1 373 54.2
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 8.3e-93 344.7 344 55.5
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 1.9e-92 343.6 357 53.5
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 4.1e-92 342.4 304 63.2
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 1.2e-91 340.9 372 51.3
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 1.6e-91 340.5 344 54.9
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 1.0e-90 337.8 293 60.4
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 3.0e-90 336.3 352 54.0
SalBow3G0632 Salvia bowleyana HOM05D004482 ORTHO05D005212 3.9e-90 335.9 249 76.3
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 1.1e-89 334.3 265 69.8
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 2.5e-89 333.2 359 52.1
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 1.6e-88 330.5 410 49.3
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 2.1e-88 330.1 312 59.3
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.8e-88 329.7 303 60.1
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 1.1e-87 327.8 297 58.9
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 1.1e-87 327.8 337 55.8
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.0e-87 325.9 303 60.4
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 2.0e-86 323.6 555 40.5
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 7.5e-86 321.6 315 57.1
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 1.7e-85 320.5 337 53.1
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 2.2e-85 320.1 352 52.8
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 1.1e-84 317.8 271 62.4
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 1.9e-84 317.0 302 57.3
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 2.4e-84 316.6 348 49.1
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 3.9e-82 309.3 293 57.0
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 3.9e-82 309.3 344 51.5
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 1.5e-81 307.4 293 57.0
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 8.1e-80 301.6 306 56.5
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 1.5e-78 297.4 311 54.7
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 9.9e-78 294.7 223 68.2
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 4.6e-75 285.8 340 47.1
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 3.4e-70 269.6 345 47.5
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 4.9e-69 265.8 350 45.7
Oeu006194.1 Olea europaea HOM05D004482 ORTHO05D005212 5.8e-62 242.3 192 70.3
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 1.4e-60 237.7 332 45.2
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 1.9e-60 237.3 248 52.8
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 8.1e-56 221.9 151 72.2
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 4.0e-55 219.5 163 66.3
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 1.5e-49 201.1 127 78.7
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 2.8e-48 196.8 232 50.9
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 2.8e-48 196.8 161 66.5
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 8.1e-48 195.3 202 52.5
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 3.1e-47 193.4 320 38.4
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 1.2e-46 191.4 380 35.8
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 2.0e-46 190.7 327 36.1
Gohir.D02G026860 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.2e-45 187.2 199 53.8
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 3.8e-45 186.4 172 59.3
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 2.1e-40 170.6 309 35.9
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 1.2e-38 164.9 113 70.8
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 1.2e-38 164.9 113 70.8
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 5.8e-38 162.5 136 62.5
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 5.8e-38 162.5 104 77.9
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 7.1e-36 155.6 238 43.7
DCAR_012442 Daucus carota HOM05D004482 ORTHO05D005212 4.6e-27 126.3 105 65.7
FAN16G2719 Fragaria x ananassa HOM05D004482 ORTHO05D005212 2.0e-25 120.9 133 51.9
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-24 116.7 151 44.4
BcaB01g01629 Brassica carinata HOM05D004482 ORTHO05D005212 4.1e-23 113.2 248 37.5
VMungo0251G0179 Vigna mungo HOM05D004482 ORTHO05D005212 3.4e-22 110.2 140 44.3
TWI09G0568 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 1.1e-20 105.1 115 47.0
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 2.0e-17 94.4 321 28.0
EL10Ac4g09026 Beta vulgaris HOM05D004482 ORTHO05D005212 1.7e-16 91.3 86 55.8
CDE09G0489 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 1.2e-14 85.1 109 45.9
Zm00001eb291290 Zea mays HOM05D004482 ORTHO05D005212 2.8e-08 63.9 243 26.7


User provided reference genes

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