Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 2.6e-206 721.8 368 100.0
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 2.1e-123 446.4 425 57.4
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 2.2e-117 426.4 414 58.7
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 1.2e-107 394.0 447 50.6
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 2.8e-80 303.1 502 41.6
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 2.0e-73 280.4 370 44.9
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 8.3e-56 221.9 422 37.0
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 1.0e-53 214.9 417 35.3
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 1.3e-53 214.5 444 34.2
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 1.2e-49 201.4 411 37.2
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 1.5e-49 201.1 424 36.1
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 4.4e-49 199.5 381 35.2
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 6.4e-48 195.7 350 38.0
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 8.3e-48 195.3 361 34.6
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 1.1e-47 194.9 445 34.4
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.4e-47 194.5 417 34.1
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 1.9e-47 194.1 379 36.9
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 7.1e-47 192.2 404 34.4
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 3.5e-46 189.9 368 37.2
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 6.0e-46 189.1 417 34.3
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 3.9e-45 186.4 370 36.2
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.1e-45 186.0 383 35.8
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 5.1e-45 186.0 399 34.1
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 5.1e-45 186.0 427 32.6
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 8.6e-45 185.3 420 32.9
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 1.1e-44 184.9 420 32.9
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 3.3e-44 183.3 379 35.1
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 4.3e-44 183.0 368 34.2
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 7.3e-44 182.2 369 33.9
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 7.3e-44 182.2 420 33.6
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 7.3e-44 182.2 413 33.9
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.1e-43 180.6 322 36.3
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 3.6e-43 179.9 421 32.5
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 8.1e-43 178.7 421 32.3
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 1.8e-42 177.6 419 32.9
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 3.1e-42 176.8 421 32.1
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 3.1e-42 176.8 368 32.1
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 6.8e-42 175.6 385 33.8
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 6.8e-42 175.6 385 33.8
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 1.2e-41 174.9 413 31.2
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 1.5e-41 174.5 321 36.4
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 3.4e-41 173.3 371 34.8
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 3.4e-41 173.3 399 33.3
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 4.4e-41 172.9 408 33.6
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 9.9e-41 171.8 355 33.8
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 9.9e-41 171.8 411 31.9
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 1.3e-40 171.4 402 32.8
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 2.2e-40 170.6 389 32.4
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 6.4e-40 169.1 355 32.7
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 8.4e-40 168.7 406 31.5
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 8.4e-40 168.7 406 31.5
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 8.4e-40 168.7 360 34.2
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 1.1e-39 168.3 353 33.4
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 2.4e-39 167.2 411 31.6
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 5.4e-39 166.0 425 31.1
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 7.1e-39 165.6 414 31.4
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 1.2e-38 164.9 412 30.8
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 1.6e-38 164.5 322 36.3
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 1.6e-38 164.5 355 33.8
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 2.1e-38 164.1 355 33.8
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 3.5e-38 163.3 428 31.1
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 4.6e-38 162.9 367 32.2
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 6.0e-38 162.5 419 31.0
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 1.3e-37 161.4 402 31.8
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 2.3e-37 160.6 377 33.7
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 3.0e-37 160.2 355 33.8
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 3.9e-37 159.8 428 30.6
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 1.1e-36 158.3 381 34.1
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 1.1e-36 158.3 414 32.1
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 1.5e-36 157.9 347 32.6
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 3.3e-36 156.8 341 33.1
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 3.3e-36 156.8 361 33.2
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 1.2e-35 154.8 357 33.1
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.6e-35 154.5 356 33.1
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 2.1e-35 154.1 364 33.5
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 2.8e-35 153.7 383 30.8
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 2.8e-35 153.7 410 31.5
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 8.1e-35 152.1 438 31.1
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 1.8e-34 151.0 358 32.1
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 4.0e-34 149.8 358 32.1
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 4.0e-34 149.8 343 34.1
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 9.0e-34 148.7 220 40.5
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.6e-33 147.1 364 32.7
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 2.2e-32 144.1 420 30.0
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 1.9e-31 141.0 285 35.4
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 1.0e-29 135.2 339 32.4
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.7e-29 134.4 130 51.5
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 3.0e-29 133.7 130 50.8
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 6.6e-29 132.5 130 50.8
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 1.1e-28 131.7 396 28.5
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 1.9e-28 131.0 376 32.7
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 7.3e-28 129.0 130 49.2
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 1.6e-27 127.9 368 31.8
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 1.8e-26 124.4 359 28.1
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 8.4e-24 115.5 201 38.3
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.7e-22 110.5 201 36.8
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 7.9e-22 109.0 464 26.7
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 1.3e-21 108.2 454 26.9
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 1.5e-20 104.8 351 28.8
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 5.6e-20 102.8 231 34.2
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 1.5e-17 94.7 166 37.3
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 3.4e-17 93.6 115 40.0
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 3.4e-17 93.6 79 53.2
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.3e-16 91.7 231 32.5
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 2.9e-16 90.5 372 27.4
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 1.2e-14 85.1 215 31.6
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 1.2e-14 85.1 298 27.2
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 4.3e-12 76.6 80 50.0
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 2.1e-11 74.3 75 44.0
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.8e-10 71.2 46 69.6
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 4.0e-10 70.1 45 68.9
BraA10t42873Z Brassica rapa HOM05D006262 ORTHO05D007266 1.4e-07 61.6 178 28.7
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 3.2e-07 60.5 155 31.6
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 6.1e-06 56.2 124 30.6


User provided reference genes

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