Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold319G48538 Striga asiatica HOM05D011744 ORTHO05D013311 7.8e-106 387.1 193 100.0
SGA_v2.0_scaffold238G43896 Striga asiatica HOM05D011744 ORTHO05D400094 3.9e-57 225.3 196 68.4
SGA_v2.0_scaffold38G15052 Striga asiatica HOM05D011744 ORTHO05D406050 4.5e-53 211.8 113 96.5
SGA_v2.0_scaffold84G26504 Striga asiatica HOM05D011744 ORTHO05D399379 2.7e-50 202.6 115 93.9
SGA_v2.0_scaffold257G45697 Striga asiatica HOM05D011744 ORTHO05D402722 3.0e-49 199.1 105 96.2
SGA_v2.0_scaffold43G16479 Striga asiatica HOM05D011744 ORTHO05D403080 4.4e-40 168.7 113 81.4
SGA_v2.0_scaffold780G53590 Striga asiatica HOM05D011744 ORTHO05D401770 7.0e-22 108.2 115 54.8
SGA_v2.0_scaffold5G02951 Striga asiatica HOM05D011744 ORTHO05D405449 9.2e-22 107.8 115 54.8
SGA_v2.0_scaffold167G38438 Striga asiatica HOM05D011744 ORTHO05D401765 1.6e-21 107.1 115 54.8
SGA_v2.0_scaffold157G37339 Striga asiatica HOM05D011744 ORTHO05D399373 2.5e-19 99.8 112 53.6
SGA_v2.0_scaffold5G03035 Striga asiatica HOM05D011744 ORTHO05D402155 2.5e-19 99.8 112 53.6
SGA_v2.0_scaffold472G52097 Striga asiatica HOM05D011744 ORTHO05D403850 4.7e-18 95.5 115 50.4
SGA_v2.0_scaffold43G16250 Striga asiatica HOM05D011744 ORTHO05D403320 1.4e-17 94.0 111 52.3
SGA_v2.0_scaffold29G12302 Striga asiatica HOM05D011744 ORTHO05D021022 1.6e-13 80.5 92 50.0
SGA_v2.0_scaffold150G36686 Striga asiatica HOM05D011744 ORTHO05D405588 2.1e-13 80.1 99 51.5
SGA_v2.0_scaffold272G46343 Striga asiatica HOM05D009828 ORTHO05D013311 2.5e-11 73.2 96 41.7
SGA_v2.0_scaffold14G07095 Striga asiatica HOM05D011744 ORTHO05D401437 3.1e-09 66.2 98 45.9
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 2.0e-08 63.5 72 37.5
Gorai.013G104200 Gossypium raimondii HOM05D000017 ORTHO05D000013 2.6e-08 63.2 62 45.2
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.9e-08 61.2 54 48.1
SGA_v2.0_scaffold211G42136 Striga asiatica HOM05D009828 ORTHO05D013311 9.9e-08 61.2 62 43.5
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.7e-07 60.5 57 43.9
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.2e-07 60.1 74 44.6
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.9e-07 59.7 75 38.7
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.9e-07 58.9 74 40.5
CANSAT54G1964 Cannabis sativa HOM05D000017 ORTHO05D000013 6.4e-07 58.5 75 33.3
CANSAT56G2649 Cannabis sativa HOM05D000017 ORTHO05D000013 6.4e-07 58.5 69 43.5
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.4e-07 58.5 72 36.1
Hma1.2p1_0587F.1_g183910 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-07 58.2 58 46.6
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.4e-07 58.2 75 38.7
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 8.4e-07 58.2 66 43.9
RcHm_v2.0_Chr5g0080361 Rosa chinensis HOM05D000017 ORTHO05D000013 2.4e-06 56.6 55 45.5
CANSAT25G0520 Cannabis sativa HOM05D000017 ORTHO05D000013 3.2e-06 56.2 76 38.2
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.1e-06 55.8 98 35.7
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 5.4e-06 55.5 70 34.3
FvH4_5g24521 Fragaria vesca HOM05D000017 ORTHO05D009451 7.1e-06 55.1 70 40.0
FvH4_6g31092 Fragaria vesca HOM05D000017 ORTHO05D000013 7.1e-06 55.1 55 45.5
Prupe.6G181000 Prunus persica HOM05D000017 ORTHO05D000013 7.1e-06 55.1 74 37.8
FvH4_2g39083 Fragaria vesca HOM05D000017 ORTHO05D000013 9.2e-06 54.7 70 40.0
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 9.2e-06 54.7 74 35.1
TWI15G0100 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 9.2e-06 54.7 46 52.2


User provided reference genes

Program Settings