Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 1.4e-167 592.8 294 100.0
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 2.9e-104 382.5 308 66.9
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 7.0e-90 334.7 300 58.7
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 4.6e-89 332.0 262 69.5
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 8.1e-86 321.2 300 56.0
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 8.9e-85 317.8 301 59.8
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.0e-84 316.6 298 55.4
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 2.2e-83 313.2 299 55.2
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 1.4e-82 310.5 297 56.6
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 1.9e-82 310.1 295 53.9
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 2.1e-81 306.6 305 55.1
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 3.5e-81 305.8 305 51.8
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 3.5e-81 305.8 284 55.3
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 3.5e-81 305.8 298 53.7
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 4.6e-81 305.4 301 55.1
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 7.8e-81 304.7 303 57.1
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.0e-80 304.3 302 53.3
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 3.9e-80 302.4 295 56.3
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 5.1e-80 302.0 303 54.1
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 1.1e-79 300.8 308 53.6
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.5e-79 300.4 291 55.0
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 1.5e-79 300.4 299 55.9
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 3.3e-79 299.3 310 53.2
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 4.3e-79 298.9 293 53.2
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 5.6e-79 298.5 292 54.5
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 5.6e-79 298.5 302 52.0
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 1.2e-78 297.4 282 56.7
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 2.1e-78 296.6 303 55.4
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 6.2e-78 295.0 302 52.6
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 6.2e-78 295.0 302 52.6
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 8.1e-78 294.7 304 53.6
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 8.1e-78 294.7 301 54.2
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 8.1e-78 294.7 302 53.0
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 4.0e-77 292.4 300 50.3
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 5.2e-77 292.0 297 52.9
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 6.8e-77 291.6 288 52.4
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 8.9e-77 291.2 304 52.6
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 1.5e-76 290.4 302 53.0
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 2.0e-76 290.0 302 53.0
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 2.0e-76 290.0 305 51.1
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 2.0e-76 290.0 286 53.5
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 3.4e-76 289.3 288 53.8
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 4.4e-76 288.9 298 51.3
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 4.4e-76 288.9 297 52.2
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 3.8e-75 285.8 293 51.9
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-74 284.3 300 52.0
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 1.1e-74 284.3 300 52.0
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 1.1e-74 284.3 306 53.3
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 7.1e-74 281.6 274 57.7
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.7e-73 279.6 302 51.0
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 1.0e-72 277.7 298 49.7
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 4.3e-71 272.3 307 49.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 5.6e-71 271.9 295 51.5
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.2e-70 270.8 298 50.3
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 3.6e-70 269.2 299 48.5
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.4e-69 267.3 307 49.2
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 4.0e-69 265.8 276 52.5
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 4.0e-69 265.8 295 49.8
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 8.9e-69 264.6 302 48.0
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 8.9e-69 264.6 259 56.4
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 7.6e-68 261.5 300 47.7
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 8.4e-67 258.1 302 47.4
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 3.2e-66 256.1 280 52.1
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 3.2e-66 256.1 296 45.9
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 7.8e-65 251.5 292 48.6
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 1.0e-64 251.1 297 46.1
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 5.1e-64 248.8 313 45.4
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 5.1e-64 248.8 302 46.4
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.1e-64 248.8 302 46.4
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 1.1e-63 247.7 292 48.6
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 3.1e-61 239.6 304 46.7
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 4.0e-61 239.2 314 44.6
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 1.2e-60 237.7 295 46.1
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 5.8e-60 235.3 305 43.3
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 1.7e-59 233.8 248 51.6
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 4.2e-58 229.2 255 51.0
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 5.4e-58 228.8 252 50.0
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 5.4e-58 228.8 301 44.5
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 3.0e-56 223.0 254 50.8
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 1.3e-54 217.6 280 42.9
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 3.6e-54 216.1 309 41.1
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 3.1e-53 213.0 302 42.4
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 2.6e-52 209.9 270 47.8
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 2.7e-49 199.9 249 47.4
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 4.3e-47 192.6 212 48.1
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 6.9e-45 185.3 312 40.4
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 4.5e-44 182.6 297 39.4
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.2e-43 180.3 234 46.2
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 3.2e-42 176.4 195 49.2
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 4.2e-42 176.0 167 53.3
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.5e-42 175.6 183 49.7
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 7.1e-42 175.3 302 38.1
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 3.5e-41 172.9 192 49.0
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 7.9e-41 171.8 152 53.9
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 1.3e-40 171.0 192 47.4
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 2.3e-40 170.2 192 48.4
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 3.0e-40 169.9 205 45.4
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 7.4e-39 165.2 160 55.0
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 7.4e-39 165.2 160 55.0
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 7.4e-39 165.2 307 34.5
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.3e-38 164.5 160 55.0
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.3e-38 164.5 160 55.0
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 2.1e-38 163.7 287 36.9
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 4.8e-38 162.5 195 46.2
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 5.3e-37 159.1 284 39.1
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 3.8e-35 152.9 135 61.5
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 8.5e-35 151.8 98 73.5
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.5e-34 150.2 107 65.4
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 4.2e-34 149.4 237 37.6
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 7.9e-33 145.2 155 53.5
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.5e-31 141.0 176 44.9
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 3.4e-28 129.8 66 83.3
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 4.4e-23 112.8 201 37.3
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.4e-21 107.1 208 36.5
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 1.1e-18 98.2 193 36.3
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.1e-15 88.2 167 37.7
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 1.2e-12 78.2 84 48.8
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.0e-11 75.1 102 44.1
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 1.0e-11 75.1 87 49.4
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 1.2e-09 68.2 52 57.7
PGSC0003DMG400015096 Solanum tuberosum HOM05D006517 ORTHO05D007886 4.4e-07 59.7 62 43.5
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 2.8e-06 57.0 111 35.1
PSO135G0716 Papaver somniferum HOM05D000903 ORTHO05D000731 4.8e-06 56.2 71 36.6
PSO724G0463 Papaver somniferum HOM05D000903 ORTHO05D000731 8.2e-06 55.5 71 36.6


User provided reference genes

Program Settings