Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 1.1e-237 826.2 434 100.0
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 3.5e-130 469.2 385 63.1
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 2.8e-119 433.0 384 56.2
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 6.9e-118 428.3 313 68.1
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 1.1e-115 421.0 382 56.3
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 1.2e-114 417.5 343 60.1
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 7.9e-114 414.8 350 60.3
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 3.3e-112 409.5 333 62.5
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 9.7e-112 407.9 381 54.9
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 8.2e-111 404.8 425 49.6
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 2.4e-110 403.3 435 49.7
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 2.4e-110 403.3 425 49.2
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 3.1e-110 402.9 368 56.0
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.5e-109 400.6 381 52.2
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 4.5e-109 399.1 379 54.1
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 2.5e-107 393.3 343 57.1
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 4.6e-106 389.0 391 51.4
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 4.6e-106 389.0 395 51.4
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 5.1e-105 385.6 368 53.5
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 6.7e-105 385.2 340 57.1
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 9.7e-104 381.3 417 48.2
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 1.3e-103 380.9 343 53.6
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 1.7e-103 380.6 369 53.1
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.2e-103 380.2 328 57.6
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 2.8e-103 379.8 369 53.1
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 3.7e-103 379.4 369 53.1
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 8.2e-103 378.3 432 48.1
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 1.4e-102 377.5 369 52.6
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 3.1e-102 376.3 370 52.7
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 6.9e-102 375.2 413 48.7
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.2e-101 374.4 355 52.1
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 2.6e-101 373.2 382 51.0
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 5.9e-101 372.1 357 51.8
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 1.0e-100 371.3 368 50.8
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 2.2e-100 370.2 355 51.0
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 2.9e-100 369.8 341 53.4
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.9e-100 369.8 368 50.3
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 6.5e-100 368.6 428 47.7
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 9.4e-99 364.8 369 51.2
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 2.7e-98 363.2 384 49.0
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 1.0e-97 361.3 369 50.4
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 3.0e-97 359.8 430 46.5
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 3.0e-97 359.8 335 54.0
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 5.1e-97 359.0 368 50.8
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 6.7e-97 358.6 368 49.5
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 8.8e-97 358.2 314 58.3
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 8.8e-97 358.2 333 54.7
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 2.0e-96 357.1 338 52.4
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 9.7e-96 354.8 338 52.1
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 1.3e-95 354.4 368 50.0
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 2.2e-95 353.6 413 47.9
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 3.7e-95 352.8 343 51.9
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 9.1e-94 348.2 318 55.0
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.2e-93 347.8 357 50.7
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 1.2e-93 347.8 389 48.3
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 1.5e-93 347.4 357 49.9
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.5e-93 347.4 360 50.0
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 2.6e-93 346.7 343 51.6
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 5.9e-93 345.5 299 56.5
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 5.9e-93 345.5 324 54.3
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 1.0e-92 344.7 357 49.9
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.0e-92 344.7 335 51.9
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 2.9e-92 343.2 357 49.3
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 5.0e-92 342.4 335 53.1
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 6.5e-92 342.0 328 53.4
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 1.1e-91 341.3 357 49.3
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 1.1e-91 341.3 357 49.0
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 3.2e-91 339.7 357 50.1
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 5.5e-91 339.0 334 51.8
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.2e-90 337.8 349 49.9
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 3.9e-89 332.8 347 48.7
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 5.2e-89 332.4 287 57.5
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 5.2e-89 332.4 383 47.3
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 2.2e-87 327.0 354 49.4
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 4.8e-87 325.9 341 49.0
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 6.3e-87 325.5 368 48.6
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 8.2e-87 325.1 331 49.8
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 1.1e-86 324.7 390 46.7
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 5.3e-86 322.4 424 45.0
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 2.6e-85 320.1 342 49.1
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 3.2e-83 313.2 327 51.7
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 9.4e-83 311.6 424 41.5
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 2.7e-82 310.1 368 45.9
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 1.0e-81 308.1 405 43.7
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 7.5e-80 302.0 343 46.6
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 1.8e-78 297.4 436 40.6
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 1.8e-78 297.4 339 46.9
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 7.0e-78 295.4 246 59.3
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.1e-74 283.9 352 44.9
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 2.7e-74 283.5 333 45.6
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 1.8e-73 280.8 232 59.5
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 3.4e-72 276.6 345 44.9
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 4.4e-72 276.2 246 56.1
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 8.3e-71 271.9 248 61.7
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 1.1e-67 261.5 208 63.0
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 1.5e-67 261.2 208 62.0
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.0e-65 255.0 293 45.7
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 1.4e-62 244.6 297 44.4
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 2.4e-62 243.8 299 45.2
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 4.6e-61 239.6 218 56.4
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 1.5e-59 234.6 341 40.5
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 3.3e-59 233.4 205 59.0
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 5.6e-51 206.1 181 56.4
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 4.6e-37 159.8 301 35.9
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 1.8e-33 147.9 175 45.7
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 3.2e-30 137.1 196 41.8
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 9.0e-25 119.0 343 26.8
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 1.2e-21 108.6 168 39.9
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 7.9e-21 105.9 202 33.7
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 1.3e-18 98.6 125 40.8
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 7.4e-11 72.8 174 42.5
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 3.7e-10 70.5 251 27.9
Eucgr.E00646 Eucalyptus grandis HOM05D000001 ORTHO05D011055 3.2e-06 57.4 275 23.6


User provided reference genes

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