Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold317G48459 Striga asiatica HOM05D005570 ORTHO05D007368 6.7e-59 230.7 137 100.0
SGA_v2.0_scaffold96G29016 Striga asiatica HOM05D005570 ORTHO05D007368 1.3e-25 120.2 62 91.9
SGA_v2.0_scaffold317G48460 Striga asiatica HOM05D005570 ORTHO05D007368 8.2e-25 117.5 59 94.9
SGA_v2.0_scaffold317G48443 Striga asiatica HOM05D005570 ORTHO05D007368 7.0e-24 114.4 57 96.5
SGA_v2.0_scaffold323G48653 Striga asiatica HOM05D005570 ORTHO05D007368 5.9e-23 111.3 59 89.8
SGA_v2.0_scaffold28G12060 Striga asiatica HOM05D005570 ORTHO05D007368 1.3e-22 110.2 62 85.5
MSTRG.12255 Avicennia marina HOM05D005570 ORTHO05D007368 1.2e-18 97.1 59 78.0
SGA_v2.0_scaffold2G00813 Striga asiatica HOM05D005570 ORTHO05D007368 1.5e-18 96.7 59 83.1
Nn4g22113 Nelumbo nucifera HOM05D005570 ORTHO05D007368 9.7e-18 94.0 59 74.6
Oeu015172.1 Olea europaea HOM05D005570 ORTHO05D007368 1.3e-17 93.6 59 76.3
Gohir.D01G037900 Gossypium hirsutum HOM05D005570 ORTHO05D007368 2.2e-17 92.8 59 74.6
Gorai.002G046300 Gossypium raimondii HOM05D005570 ORTHO05D007368 2.2e-17 92.8 59 74.6
Duzib213G1053 Durio zibethinus HOM05D005570 ORTHO05D007368 3.7e-17 92.0 59 74.6
vmacro09474 Vaccinium macrocarpon HOM05D005570 ORTHO05D007368 3.7e-17 92.0 59 74.6
Cpa.g.sc136.41 Carica papaya HOM05D005570 ORTHO05D007368 4.8e-17 91.7 71 60.6
CSS0001120 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 6.3e-17 91.3 60 71.7
Peaxi162Scf00612g00133 Petunia axillaris HOM05D005570 ORTHO05D007368 6.3e-17 91.3 60 71.7
HPP92_013643 Vanilla planifolia HOM05D005570 ORTHO05D007368 6.3e-17 91.3 59 72.9
ATR0751G216 Amborella trichopoda HOM05D005570 ORTHO05D007368 8.3e-17 90.9 59 74.6
CANSAT01G1761 Cannabis sativa HOM05D005570 ORTHO05D007368 8.3e-17 90.9 57 73.7
Gohir.A01G047200 Gossypium hirsutum HOM05D005570 ORTHO05D007368 8.3e-17 90.9 59 72.9
Lsat_1_v5_gn_9_102501 Lactuca sativa HOM05D005570 ORTHO05D007368 8.3e-17 90.9 59 71.2
Cc02_g29600 Coffea canephora HOM05D005570 ORTHO05D007368 1.1e-16 90.5 59 72.9
HanXRQChr03g0075001 Helianthus annuus HOM05D005570 ORTHO05D007368 1.4e-16 90.1 56 75.0
Solyc07g042710.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 1.4e-16 90.1 58 72.4
Sopen07g023810 Solanum pennellii HOM05D005570 ORTHO05D007368 1.4e-16 90.1 58 72.4
GSVIVG01018573001 Vitis vinifera HOM05D005570 ORTHO05D007368 1.4e-16 90.1 59 72.9
Rhsim04G0030600 Rhododendron simsii HOM05D005570 ORTHO05D007368 1.8e-16 89.7 58 74.1
Thecc.07G134300 Theobroma cacao HOM05D005570 ORTHO05D007368 2.4e-16 89.4 59 71.2
MELO3C026167.2 Cucumis melo HOM05D005570 ORTHO05D007368 3.1e-16 89.0 59 71.2
TAR374G1095 Trochodendron aralioides HOM05D005570 ORTHO05D007368 3.1e-16 89.0 59 71.2
arahy.Tifrunner.gnm1.ann1.66C0B7 Arachis hypogaea HOM05D005570 ORTHO05D007368 4.1e-16 88.6 58 72.4
arahy.Tifrunner.gnm1.ann1.TWVE3E Arachis hypogaea HOM05D005570 ORTHO05D007368 4.1e-16 88.6 58 72.4
ECA240G0244 Erigeron canadensis HOM05D005570 ORTHO05D007368 4.1e-16 88.6 56 71.4
Hma1.2p1_0599F.1_g187020 Hydrangea macrophylla HOM05D005570 ORTHO05D007368 4.1e-16 88.6 59 72.9
CDE10G0507 Ceratophyllum demersum HOM05D005570 ORTHO05D007368 5.3e-16 88.2 58 74.1
Oeu031101.2 Olea europaea HOM05D005570 ORTHO05D007368 5.3e-16 88.2 53 77.4
CsaV3_1G000130 Cucumis sativus L. HOM05D005570 ORTHO05D007368 7.0e-16 87.8 59 69.5
Lj1g0005707 Lotus japonicus HOM05D005570 ORTHO05D007368 7.0e-16 87.8 59 67.8
PGR031G1532 Punica granatum HOM05D005570 ORTHO05D007368 7.0e-16 87.8 58 74.1
PGR044G2338 Punica granatum HOM05D005570 ORTHO05D007368 7.0e-16 87.8 58 74.1
Solyc07g045260.3 Solanum lycopersicum HOM05D005570 ORTHO05D007368 7.0e-16 87.8 58 70.7
Eucgr.K01395 Eucalyptus grandis HOM05D005570 ORTHO05D007368 9.1e-16 87.4 58 74.1
Lj9C217G3 Lonicera japonica HOM05D005570 ORTHO05D007368 9.1e-16 87.4 59 69.5
MBI14_g13534_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 9.1e-16 87.4 58 70.7
MBI14_g24038_MAGBIO Magnolia biondii HOM05D005570 ORTHO05D007368 9.1e-16 87.4 58 70.7
Manes.13G060500 Manihot esculenta HOM05D005570 ORTHO05D007368 9.1e-16 87.4 58 72.4
Rhsim04G0030300 Rhododendron simsii HOM05D005570 ORTHO05D007368 9.1e-16 87.4 58 72.4
SEGI_08222 Sequoiadendron giganteum HOM05D005570 ORTHO05D007368 9.1e-16 87.4 59 72.9
arahy.Tifrunner.gnm1.ann1.18Q938 Arachis hypogaea HOM05D005570 ORTHO05D007368 1.2e-15 87.0 58 70.7
Nitab4.5_0005376g0020 Nicotiana tabacum HOM05D005570 ORTHO05D007368 1.2e-15 87.0 58 70.7
Sed0027705 Sechium edule HOM05D005570 ORTHO05D007368 1.2e-15 87.0 59 67.8
TWI18G0239 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.2e-15 87.0 58 72.4
unitig_26.g9513 Utricularia gibba HOM05D005570 ORTHO05D007368 1.2e-15 87.0 58 72.4
Lj8A137G54 Lonicera japonica HOM05D005570 ORTHO05D007368 1.6e-15 86.7 59 69.5
Lalb_Chr09g0328771 Lupinus albus HOM05D005570 ORTHO05D007368 1.6e-15 86.7 59 67.8
TWI36G1338 Tripterygium wilfordii HOM05D005570 ORTHO05D007368 1.6e-15 86.7 60 66.7
Aqoxy2G01347 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.7e-15 85.9 60 66.7
Aqoxy7G00316 Aquilegia oxysepala HOM05D005570 ORTHO05D007368 2.7e-15 85.9 60 66.7
arahy.Tifrunner.gnm1.ann1.CPK3HX Arachis hypogaea HOM05D005570 ORTHO05D007368 2.7e-15 85.9 58 70.7
CSS0039609 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 2.7e-15 85.9 60 68.3
CARHR102200 Cardamine hirsuta HOM05D005570 ORTHO05D007368 2.7e-15 85.9 60 68.3
CiPaw.01G284700 Carya illinoinensis HOM05D005570 ORTHO05D007368 2.7e-15 85.9 58 70.7
Nitab4.5_0005354g0010 Nicotiana tabacum HOM05D005570 ORTHO05D007368 2.7e-15 85.9 58 69.0
Aa31LG7G6130 Aethionema arabicum HOM05D005570 ORTHO05D007368 3.5e-15 85.5 60 66.7
Ca_18776_v3 Cicer arietinum L. HOM05D005570 ORTHO05D007368 3.5e-15 85.5 58 69.0
Glyma.07G223300 Glycine max HOM05D005570 ORTHO05D007368 3.5e-15 85.5 58 70.7
Os09g0478400 Oryza sativa ssp. japonica HOM05D005570 ORTHO05D007368 3.5e-15 85.5 58 70.7
AT2G04340 Arabidopsis thaliana HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
BcaB06g26780 Brassica carinata HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
BcaC06g35864 Brassica carinata HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
A07p06720 Brassica napus HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
C07p10300 Brassica napus HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
BolC7t41480H Brassica oleracea HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
BraA07t28466Z Brassica rapa HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
CSS0020937 Camellia sinensis var. sinensis HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 68.3
Carub.0003s2602 Capsella rubella HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
Thhalv10002687m.g Eutrema salsugineum HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
MD14G1148400 Malus domestica HOM05D005570 ORTHO05D007368 4.5e-15 85.1 58 70.7
Prupe.5G143000 Prunus persica HOM05D005570 ORTHO05D007368 4.5e-15 85.1 58 70.7
Sp3g23170 Schrenkiella parvula HOM05D005570 ORTHO05D007368 4.5e-15 85.1 60 66.7
Migut.H01280 Erythranthe guttata HOM05D005570 ORTHO05D007368 5.9e-15 84.7 56 73.2
QL10p000758 Quercus lobata HOM05D005570 ORTHO05D007368 5.9e-15 84.7 60 68.3
Zm00001eb101470 Zea mays HOM05D005570 ORTHO05D007368 5.9e-15 84.7 58 67.2
Actinidia07853 Actinidia chinensis HOM05D005570 ORTHO05D007368 7.7e-15 84.3 59 69.5
ClCG06G018310 Citrullus lanatus HOM05D005570 ORTHO05D007368 7.7e-15 84.3 59 67.8
Ciclev10016955m.g Citrus clementina HOM05D005570 ORTHO05D007368 7.7e-15 84.3 58 69.0
Cfa018716 Carpinus fangiana HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 70.7
Haze_07109 Corylus avellana HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 70.7
Lsat_1_v5_gn_4_24381 Lactuca sativa HOM05D005570 ORTHO05D007368 1.0e-14 84.0 59 66.1
MD06G1132000 Malus domestica HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 69.0
PSO063G1837 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 69.0
PSO063G6961 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 69.0
PSO421G0119 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 69.0
PSO421G0324 Papaver somniferum HOM05D005570 ORTHO05D007368 1.0e-14 84.0 58 69.0
Hund21535 Selenicereus undatus HOM05D005570 ORTHO05D007368 1.0e-14 84.0 60 68.3
AL3G42010 Arabidopsis lyrata HOM05D005570 ORTHO05D007368 1.3e-14 83.6 60 65.0
Sc21g0000460 Simmondsia chinensis HOM05D005570 ORTHO05D007368 1.7e-14 83.2 60 68.3
Ah.12g059860 Amaranthus hybridus HOM05D005570 ORTHO05D007368 2.2e-14 82.8 61 65.6
PSO357G0372 Papaver somniferum HOM05D005570 ORTHO05D007368 2.2e-14 82.8 58 69.0
Potri.014G169500 Populus trichocarpa HOM05D005570 ORTHO05D007368 2.2e-14 82.8 58 69.0
Rhsim04G0030400 Rhododendron simsii HOM05D005570 ORTHO05D007368 2.2e-14 82.8 52 75.0
COL.COLO4_17467 Corchorus olitorius HOM05D005570 ORTHO05D007368 2.9e-14 82.4 59 67.8
Psat7g132520 Pisum sativum HOM05D005570 ORTHO05D007368 2.9e-14 82.4 58 67.2
DCAR_008745 Daucus carota HOM05D005570 ORTHO05D007368 3.8e-14 82.0 58 65.5
EL10Ac4g10242 Beta vulgaris HOM05D005570 ORTHO05D007368 5.0e-14 81.6 55 70.9
VMungo0251G2804 Vigna mungo HOM05D005570 ORTHO05D007368 1.9e-13 79.7 58 63.8
Medtr4g083580 Medicago truncatula HOM05D005570 ORTHO05D007368 2.5e-13 79.3 58 62.1
Phvul.002G100000 Phaseolus vulgaris HOM05D005570 ORTHO05D007368 2.5e-13 79.3 58 63.8
RcHm_v2.0_Chr7g0188821 Rosa chinensis HOM05D005570 ORTHO05D007368 3.2e-13 79.0 58 63.8
Atru.chr6.3424 Acer truncatum HOM05D005570 ORTHO05D007368 4.2e-13 78.6 58 65.5
AUR62000128 Chenopodium quinoa HOM05D005570 ORTHO05D007368 5.5e-13 78.2 55 69.1
AUR62019308 Chenopodium quinoa HOM05D005570 ORTHO05D007368 5.5e-13 78.2 55 69.1
FvH4_5g09330 Fragaria vesca HOM05D005570 ORTHO05D007368 5.5e-13 78.2 58 63.8
FAN04G1041 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.5e-13 78.2 58 63.8
FAN13G2066 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.5e-13 78.2 58 63.8
FAN18G0853 Fragaria x ananassa HOM05D005570 ORTHO05D007368 5.5e-13 78.2 58 63.8
Potri.014G169750 Populus trichocarpa HOM05D005570 ORTHO05D007368 7.2e-13 77.8 65 60.0
Sabra14G0129400 Salix brachista HOM05D005570 ORTHO05D007368 9.4e-13 77.4 58 65.5
TPR.G34081 Trifolium pratense HOM05D005570 ORTHO05D007368 4.7e-12 75.1 58 62.1
TPR.G11531 Trifolium pratense HOM05D005570 ORTHO05D007368 6.1e-12 74.7 58 62.1
Lsat_1_v5_gn_4_72161 Lactuca sativa HOM05D005570 ORTHO05D007368 1.8e-11 73.2 50 70.0
Mapoly0084s0063 Marchantia polymorpha HOM05D005570 ORTHO05D007368 9.8e-10 67.4 59 54.2
Pp3c22_13450 Physcomitrium patens HOM05D005570 ORTHO05D007368 4.8e-09 65.1 58 55.2


User provided reference genes

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